Gene
RNA
| Item | Value |
|---|---|
| gene id | G57300 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 33363604 ~ 33364547 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67481 | True | 682 | lncRNA | 0.45 | 2 | 33363604 | 33364547 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dhrs7 | dhrs7 | coding | downstream | 1739 | 33357030 ~ 33361865 (-) |
| prkcha | prkch,LOC107707065,LOC107675581,LOC107757130 | coding | downstream | 26809 | 33329005 ~ 33336795 (-) |
| hif1aa | hif1a | coding | downstream | 41941 | 33306312 ~ 33321663 (-) |
| LOC113542112 | NA | coding | downstream | 70261 | 33286801 ~ 33293343 (-) |
| osr1 | osr1,LOC108440809,LOC107548611,LOC107588719,LOC107668777,LOC107757107,LOC107675531 | coding | downstream | 259361 | 33095656 ~ 33104243 (-) |
| six1a | six1,six1b,LOC108263091,LOC108414064,LOC108257556,LOC107697302,LOC107589069,LOC108434988 | coding | upstream | 20567 | 33385114 ~ 33387819 (-) |
| six4a | NA | coding | upstream | 24946 | 33389493 ~ 33403724 (-) |
| tdrd9 | tdrd9,LOC104966444 | coding | upstream | 103476 | 33468023 ~ 33484082 (-) |
| kif15 | kif15 | coding | upstream | 120466 | 33485013 ~ 33505325 (-) |
| tacc3 | tacc3,LOC108440911 | coding | upstream | 142547 | 33507094 ~ 33516686 (-) |
| G57294 | NA | non-coding | downstream | 2913 | 33326080 ~ 33360691 (-) |
| G57292 | NA | non-coding | downstream | 58086 | 33303570 ~ 33305518 (-) |
| G57290 | NA | non-coding | downstream | 65291 | 33296819 ~ 33298313 (-) |
| G57275 | syt14 | non-coding | downstream | 105812 | 33257229 ~ 33257792 (-) |
| G57267 | NA | non-coding | downstream | 127892 | 33234666 ~ 33235712 (-) |
| G57302 | ppm1a,LOC106571506 | non-coding | upstream | 510 | 33365057 ~ 33410771 (-) |
| G57224 | NA | non-coding | upstream | 5313 | 33369860 ~ 33375501 (-) |
| G57232 | NA | non-coding | upstream | 6228 | 33370775 ~ 33406126 (-) |
| G57223 | NA | non-coding | upstream | 46001 | 33410548 ~ 33411453 (-) |
| G57317 | NA | non-coding | upstream | 57277 | 33421824 ~ 33422474 (-) |
| slc38a6 | slc38a6 | other | downstream | 18768 | 33337403 ~ 33344836 (-) |
| G57210 | NA | other | downstream | 264032 | 33019278 ~ 33099572 (-) |
| G57124 | pdss2,LOC102782659 | other | downstream | 634863 | 32715827 ~ 32728741 (-) |
| slc66a3 | pqlc3 | other | downstream | 701992 | 32653836 ~ 32661612 (-) |
| ndufaf1 | ndufaf1,LOC107588570 | other | downstream | 974460 | 32374336 ~ 32389144 (-) |
| lrrc9 | LOC108262921 | other | upstream | 59117 | 33423664 ~ 33442815 (-) |
| G57322 | NA | other | upstream | 90675 | 33455222 ~ 33462342 (-) |
| mycla | LOC108263077 | other | upstream | 115801 | 33480348 ~ 33524819 (-) |
| trnag-gcc_5 | NA | other | upstream | 165380 | 33529927 ~ 33529997 (-) |
| LOC113542143 | LOC108263078 | other | upstream | 198231 | 33562778 ~ 33570236 (-) |
