Gene
RNA
| Item | Value |
|---|---|
| gene id | G57335 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 33535478 ~ 33535975 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67519 | True | 474 | lncRNA | 0.40 | 2 | 33535478 | 33535975 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tacc3 | tacc3,LOC108440911 | coding | downstream | 18792 | 33507094 ~ 33516686 (-) |
| kif15 | kif15 | coding | downstream | 30153 | 33485013 ~ 33505325 (-) |
| tdrd9 | tdrd9,LOC104966444 | coding | downstream | 51396 | 33468023 ~ 33484082 (-) |
| six4a | NA | coding | downstream | 131754 | 33389493 ~ 33403724 (-) |
| six1a | six1,six1b,LOC108263091,LOC108414064,LOC108257556,LOC107697302,LOC107589069,LOC108434988 | coding | downstream | 147659 | 33385114 ~ 33387819 (-) |
| LOC113541868 | NA | coding | upstream | 51918 | 33587893 ~ 33592807 (-) |
| si:dkey-157l19.2 | LOC108262993 | coding | upstream | 74482 | 33610457 ~ 33644218 (-) |
| lgmn | lgmn,LOC100304954 | coding | upstream | 109783 | 33645758 ~ 33656870 (-) |
| pcnx1 | pcnx1,LOC108262680 | coding | upstream | 127839 | 33663814 ~ 33692927 (-) |
| med6 | med6,LOC107654960,LOC107602956,LOC107683373 | coding | upstream | 158226 | 33694201 ~ 33698292 (-) |
| G57220 | NA | non-coding | downstream | 68171 | 33465699 ~ 33467307 (-) |
| G57317 | NA | non-coding | downstream | 113004 | 33421824 ~ 33422474 (-) |
| G57223 | NA | non-coding | downstream | 124025 | 33410548 ~ 33411453 (-) |
| G57302 | ppm1a,LOC106571506 | non-coding | downstream | 124707 | 33365057 ~ 33410771 (-) |
| G57354 | NA | non-coding | upstream | 35435 | 33571410 ~ 33572419 (-) |
| G57356 | NA | non-coding | upstream | 39311 | 33575286 ~ 33576847 (-) |
| G57368 | NA | non-coding | upstream | 121019 | 33656994 ~ 33660021 (-) |
| G57379 | NA | non-coding | upstream | 165245 | 33701220 ~ 33762528 (-) |
| G57378 | l2hgdh | non-coding | upstream | 166530 | 33702505 ~ 33704326 (-) |
| trnag-gcc_5 | NA | other | downstream | 5481 | 33529927 ~ 33529997 (-) |
| mycla | LOC108263077 | other | downstream | 10659 | 33480348 ~ 33524819 (-) |
| G57322 | NA | other | downstream | 73136 | 33455222 ~ 33462342 (-) |
| lrrc9 | LOC108262921 | other | downstream | 92663 | 33423664 ~ 33442815 (-) |
| slc38a6 | slc38a6 | other | downstream | 190642 | 33337403 ~ 33344836 (-) |
| LOC113542143 | LOC108263078 | other | upstream | 26803 | 33562778 ~ 33570236 (-) |
