G57379


Basic Information

Item Value
gene id G57379
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 33701220 ~ 33762528 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU67569
tgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttaccgtcAGAGCTCTGAGGTGGACTCTGTGCTGCAGGTTTGATGTCTGAGACGGTGAACATGGTTCTGATGGAGCCTCCGGCCTGCTGGAAATCTGCAGCGTACGATAAACACACCGCACGCCAGTCCACTATCCCCGTGTGGGGCGAGTCCACAGCCATGatccccctGCAGtaaggttctctctctctgatctctctggCACTGAGCAGTTTGAGGTCTTTCACGTTGTTCTTCTGTCCGCGTTCATACAGAGCTTTCAGACGCGGAACCTCCTCTCTGTCCACTGCTACAat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67569 True 340 lncRNA 0.54 3 33701220 33762528

Neighbor

gene id symbol gene type direction distance location
med6 med6,LOC107654960,LOC107602956,LOC107683373 coding downstream 2928 33694201 ~ 33698292 (-)
pcnx1 pcnx1,LOC108262680 coding downstream 8293 33663814 ~ 33692927 (-)
lgmn lgmn,LOC100304954 coding downstream 44350 33645758 ~ 33656870 (-)
si:dkey-157l19.2 LOC108262993 coding downstream 57002 33610457 ~ 33644218 (-)
LOC113541868 NA coding downstream 108413 33587893 ~ 33592807 (-)
LOC117596872 NA coding upstream 2295 33764823 ~ 33769298 (-)
LOC113541951 NA coding upstream 12028 33774556 ~ 33776425 (-)
G57368 NA non-coding downstream 41199 33656994 ~ 33660021 (-)
G57356 NA non-coding downstream 124373 33575286 ~ 33576847 (-)
G57354 NA non-coding downstream 128801 33571410 ~ 33572419 (-)
G57335 NA non-coding downstream 165245 33535478 ~ 33535975 (-)
G57220 NA non-coding downstream 233913 33465699 ~ 33467307 (-)
LOC113542143 LOC108263078 other downstream 130984 33562778 ~ 33570236 (-)
trnag-gcc_5 NA other downstream 171223 33529927 ~ 33529997 (-)
mycla LOC108263077 other downstream 176401 33480348 ~ 33524819 (-)
G57322 NA other downstream 238878 33455222 ~ 33462342 (-)
lrrc9 LOC108262921 other downstream 258405 33423664 ~ 33442815 (-)

Expression


Co-expression Network