hemgn


Basic Information

Item Value
gene id hemgn
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 1162619 ~ 1165369 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026910950.2
GTTGCACGAACTCTCCCAGCTCAGCGTTAATGTTTAGCCTGATAACTCTTCTCTCAGGGGCAGGAGCCACAGCGCTTTTCTTCACCCGCCCGTCTTCCACTTGCACTTTATGCGTTTGATCGAGCGACAAAATGGAGGAGACGCTGGAGGAGAAAGTTCCTGTCGAAGTGAAAGTCCCTGATGATGACCAAGGAGGGACTGGACGGCGGCTCCGGGATCGAGATCTGCTGAGGAAGAGGAAAGCCGAAGCGGAAGAGCGAGCAACTAACCAGTGGGTTTATGGAGCTCAGAGCAGCAAACGAGcgaagagagagacaaacaatgTTCCGAAGAAGAAAGGCAGACCAAGAAAGAACGTCCCTGTGAAGGAACAACAGCTTGAATCGACAGAAGTTGAAGATTCACCCGGCCAAGCGGAGGAGGTGGTTACCGCTCCACATCCTGCTCCCGTTTCCACGCTGGATTCTGCCGCCATTCCTGCCCAAGCGTCAGCTCCTGCTCTGGATCTTCCTGCTGCGCTTTCCGTCCCTATCCCTCTTCCTGCTCCTGATGTGACTCCAGAGGTGAAGCCCAGCAGTGAAGCTCTTCTTCAGGAGGTTCTGATTGAAGATCTCGGCCCTGATGAGCAAGATGACAAAGCCAAAGCAGTGCCTCAAGACAAACTTGTAATCGATCAAGGTGGTGTTGCGGAGCCGTCAGCCATCGACGCCGCTGAACAGAGTAAAGCGTTCTCAGATACAGTGTTAGCGTCGCCTGACTCGATACCTGGAAACCTTATCTAACTGATCCCTGACCAGTCCCAGATATTATAGCATTACCACAATCACATTGTATTTCACTGGTtaactttttattgtttttttttttttttaatttcaagtgTGTATATGAGAAATTAGACCAAAAAAAAGGGACCAATAACTCATCAGAGTGTTCGCAACCTATGTGTAATTTGAATCAGGaacaaatgtatatttattaatatgactATTACATTGTGATGTCGTTTTCTTCAGACTTTTtgcaaaatgaatcattttaaataaaagagaaacagTGAATTTGTA
>XM_026910952.2
AACTCTCCCAGCTCAGCGTTAATGTTTAGCCTGATAACTCTTCTCTCAGGGGCAGGAGCCACAGCGCTTTTCTTCACCCGCCCGTCTTCCACTTGCACTTTATGCGTTTGATCGAGCGACAAAATGGAGGAGACGCTGGAGGAGAAAGTTCCTGTCGAAGTGAAAGTCCCTGATGATGACCAAGGAGGGACTGGACGGCGGCTCCGGGATCGAGATCTGCTGAGGAAGAGGAAAGCCGAAGCGGAAGAGCGAGCAACTAACCAAGCTCAGAGCAGCAAACGAGcgaagagagagacaaacaatgTTCCGAAGAAGAAAGGCAGACCAAGAAAGAACGTCCCTGTGAAGGAACAACAGCTTGAATCGACAGAAGTTGAAGATTCACCCGGCCAAGCGGAGGAGGTGGTTACCGCTCCACATCCTGCTCCCGTTTCCACGCTGGATTCTGCCGCCATTCCTGCCCAAGCGTCAGCTCCTGCTCTGGATCTTCCTGCTGCGCTTTCCGTCCCTATCCCTCTTCCTGCTCCTGATGTGACTCCAGAGGTGAAGCCCAGCAGTGAAGCTCTTCTTCAGGAGGTTCTGATTGAAGATCTCGGCCCTGATGAGCAAGATGACAAAGCCAAAGCAGTGCCTCAAGACAAACTTGTAATCGATCAAGGTGGTGTTGCGGAGCCGTCAGCCATCGACGCCGCTGAACAGAGTAAAGCGTTCTCAGATACAGTGTTAGCGTCGCCTGACTCGATACCTGGAAACCTTATCTAACTGATCCCTGACCAGTCCCAGATATTATAGCATTACCACAATCACATTGTATTTCACTGGTtaactttttattgtttttttttttttttaatttcaagtgTGTATATGAGAAATTAGACCAAAAAAAAGGGACCAATAACTCATCAGAGTGTTCGCAACCTATGTGTAATTTGAATCAGGaacaaatgtatatttattaatatgactATTACATTGTGATGTCGTTTTCTTCAGACTTTTtgcaaaatgaatcattttaaataaaagagaaacagTGAATTTGTA

Function

NR:

description
PREDICTED: mitogen-activated protein kinase 7-like

GO:

id name namespace
GO:0008144 drug binding molecular_function
GO:0019825 oxygen binding molecular_function
GO:0036094 small molecule binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026910950.2 True 1067 mRNA 0.47 4 1162619 1165369
XM_026910952.2 False 1047 mRNA 0.47 4 1162627 1165369

Neighbor

gene id symbol gene type direction distance location
uso1 uso1 coding upstream 67698 1072737 ~ 1094921 (+)
arhgef38 arhgef38 coding upstream 100745 1038675 ~ 1061874 (+)
LOC113524625 LOC108263780 coding upstream 137274 1017394 ~ 1025345 (+)
LOC117596917 NA coding upstream 173815 985548 ~ 988804 (+)
LOC113525488 NA coding upstream 460052 698177 ~ 702567 (+)
LOC113524617 NA coding downstream 6516 1171885 ~ 1176844 (+)
spag5 spag5 coding downstream 14109 1179478 ~ 1191246 (+)
foxe1 foxe1 coding downstream 83704 1249073 ~ 1257956 (+)
bnc2 bnc2,LOC107595060 coding downstream 228828 1394197 ~ 1583922 (+)
psip1a psip1,LOC108262878,LOC108439950,LOC106610301 coding downstream 619171 1784540 ~ 1806551 (+)
G38596 NA non-coding upstream 3291 1158426 ~ 1159328 (+)
G38589 anp32b,an32b,LOC106602331,LOC106602332,LOC106610273 non-coding upstream 9293 1119294 ~ 1153326 (+)
G38593 NA non-coding upstream 25593 1136664 ~ 1137026 (+)
G38585 NA non-coding upstream 93302 1068247 ~ 1069317 (+)
G38582 NA non-coding upstream 113190 1046243 ~ 1049429 (+)
G38608 NA non-coding downstream 85431 1250800 ~ 1772777 (+)
G38623 NA non-coding downstream 104828 1270197 ~ 1271301 (+)
G38607 NA non-coding downstream 129174 1294543 ~ 1390044 (+)
G38637 NA non-coding downstream 168615 1333984 ~ 1335871 (+)
G38676 NA non-coding downstream 297093 1462462 ~ 1464437 (+)
coro2a coro2a other upstream 20685 1102778 ~ 1141934 (+)
G38577 NA other upstream 97288 1063972 ~ 1065331 (+)
mtap mtap,LOC108263789 other upstream 417620 722127 ~ 744999 (+)
LOC113524725 LOC108261757,LOC108261316,LOC108263784,LOC108261164 other upstream 948890 200601 ~ 213729 (+)
trmo trmo other downstream 476 1165845 ~ 1188594 (+)
sh3gl2a sh3gl2,LOC107595059,LOC107714635,LOC107757631,LOC107700329 other downstream 28850 1194219 ~ 1224601 (+)
cdk2ap2 cdk2ap2 other downstream 818278 1983647 ~ 1997265 (+)
stox2a stox2,stox2a,LOC108434127,LOC107559650,LOC107550915,LOC107748824,LOC107671062,LOC107684970 other downstream 860119 2025488 ~ 2091343 (+)
LOC113545357 NA other downstream 2666498 3831867 ~ 3834626 (+)

Expression


Co-expression Network