anp32b (anp32b)


Basic Information

Item Value
gene id anp32b
gene name anp32b
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 1146129 ~ 1153350 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026910961.2
ctctgagtgtgtgtgagtgtgtacgagtgtgtgttggagtttAAGTTGGCGTGGtgtgtttttggaaggagtttaGCTCGTTTGCACTCAATCCCttatttctttcctcttttaaaGCTTTCCTGTCTTCTGGGCTCGGTATAAATCTCCTCCAAACCccaagagaaaagacagaaagtgcacagcagattttttcttttttttttcttttcttttttttttttttttttaaataaataaaaaaaccagCCTGGCAGCATGGACATGAAAAAGAGGATCCATTTGGAGCTGAGAAACAGGACACCATCTGATgtGCAGGAACTCGTTCTGGAGAACTGCAGATCGAACGAGGGGAAGATCGAAGGCCTCACTGCCGAATTCGTCAATCTCGAATATCTCAGTTTGATAAACGTCGGATTAATCTCCGTGTCTAACCTGCCCAAACTCGCCAAGCTCAAAAAGCTGGAACTCAGTGATAACAGAATCTCGGGCGGCCTCGACGTTTTAGCGGAGAAACTCCCAAACCTGACGCATCTAGACCTGAGTGGTAACAAACTGAAAGACATCAGCACCTTGGAACCTCTGAAAAAACTCGACCACTTGAAGAGTCTCGATCTGTTCAACTGTGAAGTGACGAATCTGAACGGTTATCGGGAGAGCGTGTTCAAGCTGCTGCCTCAGCTCACGTACCTGGACGGATACGACGCCGAGGACCGCGAGGCTTCCGACTCGGACGGCGAGGTGGACGGCGTGGACGAGGACGAAGACGAGGAGggcgaggaggaagaggaggaggacggCGAGGAGGAAGAGTTTGATGAAGAAGAGGACGAGGACGAAGATGAGGACGAGGTAGAAGGAGAGGAAGACGATGAAGACGTCAGCGGAGAGGATGAGGAGGAAGACTTCGGTCAGGACGGAGAGGTGGACGATGAAGAcgaggatgatgatgaagatgatgaagAAGAAGAAGTAACgaagggagagaaaaggaagagagaagcCGACGATGAAGACgaggatgacgatgatgatgacgatgaatAAAATCCAACCAGCCAATCAGCTTCCTCCATAACCCCACCCTCCCTTTTTTTACTCACTGACCTCAGTTGCCCCGCCCCTCGTTTTTCCCTCCCTGCGTTTCTACCCCATTGGGGACAAGACTGTACTGCGTGGGCGGGGCATGTGGAACCGAGAGAGCACGCTATTGGTCAGTCCACTCCGCATTCCACATGTTCAACTCCAAACCCCGCCCATGTCTCtcttaagctccgccccttccctcctctcctgtgtgtgtgtgtgtgtgtgtgtgtgtgaagtgccTGTGTGAGGACTTTGGGGATCTAGTTTTGGGTCTGtgcttttaatattttgttggagaattgtttattttttcctcttttcttatttttattgtttgacTTTGCCTTTTTGTTTCACTTTCTCAATAAGATTATCGCTATAGCAACCGTGTGACGAGCGAGCCATCATTTTTAGCGTGGCGGCTCGTCACACACCTCCGTGTCACTGCTAAATTTGTACTTTCTGAAAGACGAAGAAAACAaactttgtaaataaaatgacattttgtgctTC
>XM_026910962.2
ctctgagtgtgtgtgagtgtgtacgagtgtgtgttggagtttAAGTTGGCGTGGtgtgtttttggaaggagtttaGCTCGTTTGCACTCAATCCCttatttctttcctcttttaaaGCTTTCCTGTCTTCTGGGCTCGGTATAAATCTCCTCCAAACCccaagagaaaagacagaaagtgcacagcagattttttcttttttttttcttttcttttttttttttttttttaaataaataaaaaaaccagCCTGGCAGCATGGACATGAAAAAGAGGATCCATTTGGAGCTGAGAAACAGGACACCATCTGATgtGCAGGAACTCGTTCTGGAGAACTGCAGATCGAACGAGGGGAAGATCGAAGGCCTCACTGCCGAATTCGTCAATCTCGAATATCTCAGTTTGATAAACGTCGGATTAATCTCCGTGTCTAACCTGCCCAAACTCGCCAAGCTCAAAAAGCTGGAACTCAGTGATAACAGAATCTCGGGCGGCCTCGACGTTTTAGCGGAGAAACTCCCAAACCTGACGCATCTAGACCTGAGTGGTAACAAACTGAAAGACATCAGCACCTTGGAACCTCTGAAAAAACTCGACCACTTGAAGAGTCTCGATCTGTTCAACTGTGAAGTGACGAATCTGAACGGTTATCGGGAGAGCGTGTTCAAGCTGCTGCCTCAGCTCACGTACCTGGACGGATACGACGCCGAGGACCGCGAGGCTTCCGACTCGGACGGCGAGGTGGACGGCGTGGACGAGGACGAAGACGAGGAGggcgaggaggaagaggaggaggacggCGAGGAGGAAGAGTTTGATGAAGAAGAGGACGAGGACGAAGATGAGGACGAGGTAGAAGGAGAGGAAGACGATGAAGACGTCAGCGGAGAGGATGAGGAGGAAGACTTCGGTCAGGACGGAGAGGTGGACGATGAAGAcgaggatgatgatgaagatgatgaagAAGAAGTAACgaagggagagaaaaggaagagagaagcCGACGATGAAGACgaggatgacgatgatgatgacgatgaatAAAATCCAACCAGCCAATCAGCTTCCTCCATAACCCCACCCTCCCTTTTTTTACTCACTGACCTCAGTTGCCCCGCCCCTCGTTTTTCCCTCCCTGCGTTTCTACCCCATTGGGGACAAGACTGTACTGCGTGGGCGGGGCATGTGGAACCGAGAGAGCACGCTATTGGTCAGTCCACTCCGCATTCCACATGTTCAACTCCAAACCCCGCCCATGTCTCtcttaagctccgccccttccctcctctcctgtgtgtgtgtgtgtgtgtgtgtgtgtgaagtgccTGTGTGAGGACTTTGGGGATCTAGTTTTGGGTCTGtgcttttaatattttgttggagaattgtttattttttcctcttttcttatttttattgtttgacTTTGCCTTTTTGTTTCACTTTCTCAATAAGATTATCGCTATAGCAACCGTGTGACGAGCGAGCCATCATTTTTAGCGTGGCGGCTCGTCACACACCTCCGTGTCACTGCTAAATTTGTACTTTCTGAAAGACGAAGAAAACAaactttgtaaataaaatgacattttgtgctTC

Function

symbol description
anp32b Predicted to enable histone binding activity. Predicted to be involved in regulation of apoptotic process. Predicted to be active in nucleus. Is expressed in several structures, including alar plate midbrain region; hematopoietic system; nervous system; optic vesicle; and ventral mesoderm. Orthologous to human ANP32B (acidic nuclear phosphoprotein 32 family member B).

NR:

description
PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X1

GO: NA

KEGG:

id description
K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026910961.2 True 1602 mRNA 0.48 7 1146129 1153350
XM_026910962.2 False 1599 mRNA 0.48 7 1146129 1153350

Neighbor

gene id symbol gene type direction distance location
ints12 ints12 coding downstream 76314 1065387 ~ 1069815 (-)
ppa2 ppa2,LOC108414713 coding downstream 208680 925951 ~ 937449 (-)
cxxc4 cxxc4 coding downstream 274776 838511 ~ 871353 (-)
cdkn2a/b LOC108263810 coding downstream 390322 746338 ~ 755807 (-)
snapc3 snapc3 coding upstream 656800 1810150 ~ 1820845 (-)
si:ch211-113e8.11 LOC108263804 coding upstream 740236 1893586 ~ 1895099 (-)
ccdc149b ccdc149b,LOC108263252,LOC107550975,LOC105908379 coding upstream 794025 1947375 ~ 1964907 (-)
aip aip,LOC106609959 coding upstream 848099 2001449 ~ 2007253 (-)
sod3b sod3 coding upstream 854559 2007909 ~ 2011692 (-)
G39346 NA non-coding downstream 60676 1084439 ~ 1085453 (-)
G39348 NA non-coding downstream 99376 1046243 ~ 1046753 (-)
G39323 NA non-coding downstream 152874 992958 ~ 993255 (-)
G39313 NA non-coding downstream 192022 953899 ~ 954107 (-)
G39312 tet2,LOC108414712 non-coding downstream 220603 921127 ~ 925526 (-)
G39356 NA non-coding upstream 9300 1162650 ~ 1165350 (-)
G39390 trmo non-coding upstream 17553 1170903 ~ 1171514 (-)
G39412 NA non-coding upstream 63937 1217287 ~ 1634965 (-)
G39413 NA non-coding upstream 64151 1217501 ~ 1293597 (-)
G39411 NA non-coding upstream 139430 1292780 ~ 1294451 (-)
LOC113524614 NA other downstream 139079 1004477 ~ 1007050 (-)
G38400 NA other downstream 830601 314981 ~ 315528 (-)
LOC117596825 LOC108263784,LOC108261164,LOC108261316,LOC108263779 other downstream 878314 221729 ~ 267815 (-)
cntln cntln,LOC108263774 other upstream 117095 1270445 ~ 1369012 (-)
G39603 casp6,LOC108263800,LOC108434124 other upstream 718583 1871933 ~ 1877583 (-)
lgi2b LOC108263253,LOC108411628 other upstream 816413 1969763 ~ 1979549 (-)
G39720 NA other upstream 1020008 2173358 ~ 2173751 (-)
tenm3 tenm3,LOC108434131 other upstream 1066797 2220147 ~ 2984203 (-)

Expression


Co-expression Network