si:ch211-113e8.10 (zfp91,LOC107674257,LOC107737094)


Basic Information

Item Value
gene id si:ch211-113e8.10
gene name zfp91,LOC107674257,LOC107737094
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 1881330 ~ 1891816 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026911048.2
TCTCTTTTCATGTTATATTCGTTTAAAGCTGCGTTGTATAAAACGGGATATTGCGACACCGCTAGAATCAGTGCTTCCTCCATCTTGGATTCTCTGAAGAGCTCACGCCGTGACGTGTCGATCTTCTATTGGTCTTGACGTGATACGAATTCGCAGGTCAGAGTTCACCAGACTTGAACTTTCAAGCGCGACGAAATGTGAAACTTCTTCGCATGAGCTTGCATTTCCGTTCTCCAGCATTCGCATGCGTGTGAATGGAAGTCAGCGGAACTGAAAAGTGTAGTGTGAGCGCGGcttgagtgtgagtgagagtttGCTTACCGCGGCTTTAATGTAAACGCGGATCCGTGCAGCTGAGTGTCGCTCGTGAGCCTCCGCCGCTCAGCGCGCGCTTAAAGGAGACGCAACAAAGCCAAGATGAGGTCCGAGCCGCCCGGTTCTCGCCTACAGCCCGGTTTACTATCGCTTTAAGAGCAGACTAACACCGTCTCTGCGTCTTTAAAAGATGCTTTTTGCAGAGTTCTAACTAAGTTTGTCAGTTAATCAGAAATACAGAACAGAAAGACGGAGAGAAACCGGGGCTCGAGGAGGACTCGGTGAAACATGTTTGTGTGGAGGATCAGGGCCTTTAACGAGCAAAGTGTTTCAGAATTTTATACCGTATTCATGAGTTCATGTCCGATtggattaattaaaaacaattaaaccGAGGATTGTTGTTTGTTTCGGGGGATGATGGAAGTGCAGCGTGTGGATAAAAAAGAGAAGCGGGAGGAAGAAGACGAGGCCGCGCTCACATCCCCGGACTCGAGTGTGACCCGCACGCCGCGCAGGGCGCTCCGAGGCCGGGCGGCGACTCGAGCGAACTCCGCCGCTCCGCCTGCTTCATCCCCGGACACGAACGGAACCCCGAGTGCGGCGGGATCCGGCCGGGTGCTGCGTGACCGCTCCACGAGATCCGTCCCTGTGTGGAGGAGGAGAGACCTCGGAGTGGAGCAggacgacgacgatgatgatgatgatgatgatgaagaggaggaggaggaagcagAAGCGGAAGCTCGCCGCCGGAGGAAGACAGCGTGTCCGCGGCGCAGGAGGAACGCAGAGGCGGCCAGAGACAGCAAAGCTCCGTGTGGAGAAAGTAAGGACACTGCAGGCACTCGAGGAGCAGCTGGAAGCAGGCGAGCACAGAGCCGCAGCAGAACGCCGGCGTCTCGGGGACTTCGGGGTTCAGCACGGGTCGTGTGTAAGAGCGAACCGGAGACGGAGACCGCCTGCGcggaagaaaataaaacagctgagAAGAAGACAAGCACTGAGAAGAAGAGTGAAGTAAAGGAGGATGAGGTGCTGCTGGGTGAGGAAGATCCTCCCTTCACCGACAACCCGAAAGACAGAACGTACGAGCCTCGGGCCCAGAGTGAGGATGACGAGGGTGTCAGCAGTGACGAAGACGTGCCCTTTAAGGACGACCTGAATGACCAGAGCTACGACCCCAAATctgggagGGAAGGTCAGAAGCCGAGACGCAGAGCTCCTCCACGGctgagagagaagaaggagaaagcagctggaggagagaaagacaagGAGAAAGAGACGGAGGTGAAGACGGAAGGAGTGGAGATGGCGGACGTGAAGCAGGAGGTTGGAGAGGGAGCAGAGCCGCCCAGGAAGAGAGGGCGACGAAGAAAAGACGACAAAAGCCCCCGACTTCCCAAGAGAAGgaAGAAGCCGCCGGTGCAGTACGTGCGCTGTGAGATGGAGGGATGTGGAACGGTTCTCGCTCATCCACGCTAcctgcagcatcacattaaatatcagCACTTAATGAAGAAGAAGTATGTGTGTCCTCACCCGTCCTGCGGCCGTCTCTTCCGCCTTCAGAAACAGTTACTGCGTCACGCCAAACACCACACAGatcagaGGGACTACATCTGTGAGTTCTGCGCACGTGCGTTTAAGAGCTCTCACAATCTCGCTGTGCACCGCATGATACACACTGGAGAGAAACCACTGCAGTGCGAGATCTGCGGCTTCACCTGTCGTCAGAAAGCGTCTCTGAACTGGCACATGAAGAAGCACGACGCAGACGCCTCCTACCAGTTCTCCTGCGCCATCTGCGGCAAGAAGTTCGAGAAGAAGGACAGCGTAGTGGCTCACAAGGCCAAGAGCCACCCGGAGGTCCTGATCGCCGAGGCTCTCGCCGCAAACGCCGGCGCTCTGGTCACCACGGCGACGCCGACCACCACTCATGTGACCCCGGTGGGCGTCGGCCCCGTCATGCTGCTGGAACAGGAGCAGTCGCTGCACACCATGCAGGTGCCCGTCACTCTCGCGCTGCCCTCTACAGACGAGGCTAAGAGTGAAGCggaagtgggcggagcctcGGCGTCACACCCGACTTCTTCCAATCAGACGCTGCATTTTGTCTCCGCCCCCGTGTCCCAGCAACAGCTGTCCGTTCAGGCTTCTCCACAGATCGTTCACATGACCTTCACCACTCTTTCGCACCCGTCTCAGCAGCTCCCCCTGCTGTCCGTCACGCATCAGCTGCCCCCGAGCACTAGCTCCGCCCCTTCCGTCTCACTCCTCCCACAGATCACTTCTGTGGCTTTCACCGCTGATCCTGCACCTCCTCCGTCATCCTCcgcctcctctcctcctcctcctcctcctcaggcTGAGAGGAAAGAGGGCGGGGCACTCTGGGAGGGCGGGACTGGGAATGTGGGTGGGGTTTGGGAAGCGGGCGGGGCCGGCGAGGCGCAGGTTGTGACGGACAGCTCAGACGGGACGATCCAACACAGACTGATGTAGGGAAGGAAGAATTTCACCTCGGAATGAATTTGCAGAGGAAAGACAAGGACACTAGGCACCTCGTGTCGGAATTACACAACAGAGATTACGTTTATCTTCTCAGACATGCAAATTAgccgtttctatagcaacacaCACAACGGACAAGTGGATACACTGAACGTACAATAGCTAGCAGTTAGCAAAGGCGTGTTTTAGCATCTTTGatgggttctttttttttttagatagaaAGTAAATGCTATTGGCTAAAAATGTAAACTACCCAAAACTATTAATGCTCCTCATACGCAGGGAACGACGGGAATATGATCCTCACTGCCTTTAACTGTCGTGACACAAGTTTCTGAGACGTGAAGCTGCGTGTTGCTGTAATTCCGACACGTCCTGAAggtgctcctcctcctcctcctcagtgaACTTCCTCCGAATTTAAACTCTACAGGACTTTAAATCTATCGTGtgtattcaaattcaattttgcTAGGtttgtagatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcagaatGTTgtcctgatgtttttttttttttgtacataaacaCTTTTAGTCttcaaactgctttttttttttttggatgtttaatTTTTCACGTGTCCATTTCGGTTTAATGGAGTTAATTTTCGAATCCTTTTTGTaagtttttattctttctttctgtaaatttttttaagtaaatctcCAAACAAGGCATATGATAACCTTATAACAGGCCACTAATAGAATTCTAATAGACATGTAATAATGTTTTCTCTTTAATCGTACACCGTATTGGGACGGGGAGGGGGGTATTTATTAAAGCCACATGTCTCTCTTTACCCACGTATCTTAAAGGAACTGTTTGGCTAAACTGGTAGCTGTACGCTTTCCTTAGTTGTAAGCAGCATTAGCCTTTCATAGCTCTaatgaaaaaggaaacattCTTCATCACTGGAGCAAACCTTAATGTCATAGGAGAAAATATAACAACAGTCTTGACCCTTGATCTTAGTTCCTGTAGATTGAAACTTTTTCCACAATACtaacattttattccttaattagaCAATTACAGAAAGGAACTGTGAACAATAATGAAGGTCACGCAGCGATAAAActgttagatttaaaaaatcatttcatgctacacagttatacaaaaaaaaaagaaagaaagcaggatAGATTTGAACAGGTTCCACGTTTTATAAATCTCTCCGTTTTACTAACCATGTACAATAAACATGTCTACACTCCACTTCCttccgtctctctctgtatgtgtgtaaacaggaagtaaataaTGGCACCCCTCTGCAGTCACTGTGCATCCTGCTAATAAACACTGAAGAAGAAGGA
>XM_034302856.1
CTCTTTTCATGTTATATTCGTTTAAAGCTGCGTTGTATAAAACGGGATATTGCGACACCGCTAGAATCAGTGCTTCCTCCATCTTGGATTCTCTGAAGAGCTCACGCCGTGACGTGTCGATCTTCTATTGGTCTTGACGTGATACGAATTCGCAGGTCAGAGTTCACCAGACTTGAACTTTCAAGCGCGACGAAATGTGAAACTTCTTCGCATGAGCTTGCATTTCCGTTCTCCAGCATTCGCATGCGTGTGAATGGAAGTCAGCGGAACTGAAAAGTGTAGTGTGAGCGCGGcttgagtgtgagtgagagtttGCTTACCGCGGCTTTAATGTAAACGCGGATCCGTGCAGCTGAGTGTCGCTCGTGAGCCTCCGCCGCTCAGCGCGCGCTTAAAGGAGACGCAACAAAGCCAAGATGAGGTCCGAGCCGCCCGGTTCTCGCCTACAGCCCGGTTTACTATCGCTTTAAGAGCAGACTAACACCGTCTCTGCGTCTTTAAAAGATGCTTTTTGCAGAGTTCTAACTAAGTTTGTCAGTTAATCAGAAATACAGAACAGAAAGACGGAGAGAAACCGGGGCTCGAGGAGGACTCGGTGAAACATGTTTGTGTGGAGGATCAGGGCCTTTAACGAGCAAAGTGTTTCAGAATTTTATACCGTATTCATGAGTTCATGTCCGATtggattaattaaaaacaattaaaccGAGGATTGTTGTTTGTTTCGGGGGATGATGGAAGTGCAGCGTGTGGATAAAAAAGAGAAGCGGGAGGAAGAAGACGAGGCCGCGCTCACATCCCCGGACTCGAGTGTGACCCGCACGCCGCGCAGGGCGCTCCGAGGCCGGGCGGCGACTCGAGCGAACTCCGCCGCTCCGCCTGCTTCATCCCCGGACACGAACGGAACCCCGAGTGCGGCGGGATCCGGCCGGGTGCTGCGTGACCGCTCCACGAGATCCGTCCCTGTGTGGAGGAGGAGAGACCTCGGAGTGGAGCAggacgacgacgatgatgatgatgatgatgatgaagaggaggaggaggaagcagAAGCGGAAGCTCGCCGCCGGAGGAAGACAGCGTGTCCGCGGCGCAGGAGGAACGCAGAGGCGGCCAGAGACAGCAAAGCTCCGTGTGGAGAAAGTAAGGACACTGCAGGCACTCGAGCTGGAAGCAGGCGAGCACAGAGCCGCAGCAGAACGCCGGCGTCTCGGGGACTTCGGGGTTCAGCACGGGTCGTGTGTAAGAGCGAACCGGAGACGGAGACCGCCTGCGcggaagaaaataaaacagctgagAAGAAGACAAGCACTGAGAAGAAGAGTGAAGTAAAGGAGGATGAGGTGCTGCTGGGTGAGGAAGATCCTCCCTTCACCGACAACCCGAAAGACAGAACGTACGAGCCTCGGGCCCAGAGTGAGGATGACGAGGGTGTCAGCAGTGACGAAGACGTGCCCTTTAAGGACGACCTGAATGACCAGAGCTACGACCCCAAATctgggagGGAAGGTCAGAAGCCGAGACGCAGAGCTCCTCCACGGctgagagagaagaaggagaaagcagctggaggagagaaagacaagGAGAAAGAGACGGAGGTGAAGACGGAAGGAGTGGAGATGGCGGACGTGAAGCAGGAGGTTGGAGAGGGAGCAGAGCCGCCCAGGAAGAGAGGGCGACGAAGAAAAGACGACAAAAGCCCCCGACTTCCCAAGAGAAGgaAGAAGCCGCCGGTGCAGTACGTGCGCTGTGAGATGGAGGGATGTGGAACGGTTCTCGCTCATCCACGCTAcctgcagcatcacattaaatatcagCACTTAATGAAGAAGAAGTATGTGTGTCCTCACCCGTCCTGCGGCCGTCTCTTCCGCCTTCAGAAACAGTTACTGCGTCACGCCAAACACCACACAGatcagaGGGACTACATCTGTGAGTTCTGCGCACGTGCGTTTAAGAGCTCTCACAATCTCGCTGTGCACCGCATGATACACACTGGAGAGAAACCACTGCAGTGCGAGATCTGCGGCTTCACCTGTCGTCAGAAAGCGTCTCTGAACTGGCACATGAAGAAGCACGACGCAGACGCCTCCTACCAGTTCTCCTGCGCCATCTGCGGCAAGAAGTTCGAGAAGAAGGACAGCGTAGTGGCTCACAAGGCCAAGAGCCACCCGGAGGTCCTGATCGCCGAGGCTCTCGCCGCAAACGCCGGCGCTCTGGTCACCACGGCGACGCCGACCACCACTCATGTGACCCCGGTGGGCGTCGGCCCCGTCATGCTGCTGGAACAGGAGCAGTCGCTGCACACCATGCAGGTGCCCGTCACTCTCGCGCTGCCCTCTACAGACGAGGCTAAGAGTGAAGCggaagtgggcggagcctcGGCGTCACACCCGACTTCTTCCAATCAGACGCTGCATTTTGTCTCCGCCCCCGTGTCCCAGCAACAGCTGTCCGTTCAGGCTTCTCCACAGATCGTTCACATGACCTTCACCACTCTTTCGCACCCGTCTCAGCAGCTCCCCCTGCTGTCCGTCACGCATCAGCTGCCCCCGAGCACTAGCTCCGCCCCTTCCGTCTCACTCCTCCCACAGATCACTTCTGTGGCTTTCACCGCTGATCCTGCACCTCCTCCGTCATCCTCcgcctcctctcctcctcctcctcctcctcaggcTGAGAGGAAAGAGGGCGGGGCACTCTGGGAGGGCGGGACTGGGAATGTGGGTGGGGTTTGGGAAGCGGGCGGGGCCGGCGAGGCGCAGGTTGTGACGGACAGCTCAGACGGGACGATCCAACACAGACTGATGTAGGGAAGGAAGAATTTCACCTCGGAATGAATTTGCAGAGGAAAGACAAGGACACTAGGCACCTCGTGTCGGAATTACACAACAGAGATTACGTTTATCTTCTCAGACATGCAAATTAgccgtttctatagcaacacaCACAACGGACAAGTGGATACACTGAACGTACAATAGCTAGCAGTTAGCAAAGGCGTGTTTTAGCATCTTTGatgggttctttttttttttagatagaaAGTAAATGCTATTGGCTAAAAATGTAAACTACCCAAAACTATTAATGCTCCTCATACGCAGGGAACGACGGGAATATGATCCTCACTGCCTTTAACTGTCGTGACACAAGTTTCTGAGACGTGAAGCTGCGTGTTGCTGTAATTCCGACACGTCCTGAAggtgctcctcctcctcctcctcagtgaACTTCCTCCGAATTTAAACTCTACAGGACTTTAAATCTATCGTGtgtattcaaattcaattttgcTAGGtttgtagatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcagaatGTTgtcctgatgtttttttttttttgtacataaacaCTTTTAGTCttcaaactgctttttttttttttggatgtttaatTTTTCACGTGTCCATTTCGGTTTAATGGAGTTAATTTTCGAATCCTTTTTGTaagtttttattctttctttctgtaaatttttttaagtaaatctcCAAACAAGGCATATGATAACCTTATAACAGGCCACTAATAGAATTCTAATAGACATGTAATAATGTTTTCTCTTTAATCGTACACCGTATTGGGACGGGGAGGGGGGTATTTATTAAAGCCACATGTCTCTCTTTACCCACGTATCTTAAAGGAACTGTTTGGCTAAACTGGTAGCTGTACGCTTTCCTTAGTTGTAAGCAGCATTAGCCTTTCATAGCTCTaatgaaaaaggaaacattCTTCATCACTGGAGCAAACCTTAATGTCATAGGAGAAAATATAACAACAGTCTTGACCCTTGATCTTAGTTCCTGTAGATTGAAACTTTTTCCACAATACtaacattttattccttaattagaCAATTACAGAAAGGAACTGTGAACAATAATGAAGGTCACGCAGCGATAAAActgttagatttaaaaaatcatttcatgctacacagttatacaaaaaaaaaagaaagaaagcaggatAGATTTGAACAGGTTCCACGTTTTATAAATCTCTCCGTTTTACTAACCATGTACAATAAACATGTCTACACTCCACTTCCttccgtctctctctgtatgtgtgtaaacaggaagtaaataaTGGCACCCCTCTGCAGTCACTGTGCATCCTGCTAATAAACACTGAAGAAGAAGGA

Function

symbol description
zfp91 Enables ubiquitin-protein transferase activity. Involved in activation of NF-kappaB-inducing kinase activity and protein K63-linked ubiquitination. Located in nucleolus and nucleoplasm.

NR:

description
PREDICTED: E3 ubiquitin-protein ligase ZFP91-like isoform X1

GO: NA

KEGG:

id description
K25175 ZFP91; E3 ubiquitin-protein ligase ZFP91

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026911048.2 True 4193 mRNA 0.50 12 1881330 1891816
XM_034302856.1 False 4186 mRNA 0.50 12 1881331 1891816

Neighbor

gene id symbol gene type direction distance location
LOC113524707 LOC108263800 coding upstream 8342 1864215 ~ 1872988 (+)
LOC113524724 LOC104953273 coding upstream 20530 1856521 ~ 1860800 (+)
LOC117596857 pla2g12a,LOC108263807 coding upstream 27898 1848225 ~ 1853432 (+)
dnajb14 dnajb14 coding upstream 33917 1822256 ~ 1847413 (+)
psip1a psip1,LOC108262878,LOC108439950,LOC106610301 coding upstream 74779 1784540 ~ 1806551 (+)
cntf NA coding downstream 6975 1898791 ~ 1907652 (+)
si:dkey-117m1.4 si:dkey-117m1.4,LOC108263251,LOC108434122,LOC107559642,LOC107748830,LOC107671095 coding downstream 28346 1920162 ~ 1939926 (+)
ing2 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107737097,LOC107684977 coding downstream 123132 2014948 ~ 2018960 (+)
tmem134 tmem134,LOC107737124 coding downstream 217252 2109068 ~ 2118767 (+)
dctd dctd,cep44,LOC108263714,LOC107550883,LOC107671033,LOC100699771,LOC107684975,LOC102306286 coding downstream 260113 2151929 ~ 2163692 (+)
G38721 NA non-coding upstream 67321 1806634 ~ 1814009 (+)
G38709 NA non-coding upstream 116977 1763871 ~ 1764353 (+)
G38687 NA non-coding upstream 360076 1498168 ~ 1521254 (+)
G38681 NA non-coding upstream 402191 1478557 ~ 1479139 (+)
G38676 NA non-coding upstream 416893 1462462 ~ 1464437 (+)
G38758 NA non-coding downstream 30022 1921838 ~ 1975630 (+)
G38759 NA non-coding downstream 33508 1925324 ~ 1928330 (+)
G38756 NA non-coding downstream 48164 1939980 ~ 1941750 (+)
G38761 NA non-coding downstream 50029 1941845 ~ 1966544 (+)
G38796 NA non-coding downstream 163835 2055651 ~ 2056825 (+)
sh3gl2a sh3gl2,LOC107595059,LOC107714635,LOC107757631,LOC107700329 other upstream 656729 1194219 ~ 1224601 (+)
trmo trmo other upstream 692736 1165845 ~ 1188594 (+)
coro2a coro2a other upstream 739396 1102778 ~ 1141934 (+)
G38577 NA other upstream 815999 1063972 ~ 1065331 (+)
mtap mtap,LOC108263789 other upstream 1136331 722127 ~ 744999 (+)
cdk2ap2 cdk2ap2 other downstream 91831 1983647 ~ 1997265 (+)
stox2a stox2,stox2a,LOC108434127,LOC107559650,LOC107550915,LOC107748824,LOC107671062,LOC107684970 other downstream 133672 2025488 ~ 2091343 (+)
LOC113545357 NA other downstream 1940051 3831867 ~ 3834626 (+)
nr3c2 nr3c2,LOC107598757 other downstream 2772500 4664316 ~ 4771604 (+)
znf827 znf827 other downstream 3371766 5263582 ~ 5357860 (+)

Expression


Co-expression Network