glud1a (glud1,glud1a,LOC107563055,LOC107743560,LOC108438199,LOC103026661,LOC107725450,LOC107601820)


Basic Information

Item Value
gene id glud1a
gene name glud1,glud1a,LOC107563055,LOC107743560,LOC108438199,LOC103026661,LOC107725450,LOC107601820
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 9976131 ~ 9994390 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026933386.2
GACTTTAGATGGTGTTTGGCACTTGAGTGCAGCACACAGAGGCCAGAGCGGGactttttctctcctctgtaACACCCCGAGCCACCACGAAGTCCTTTTTCGGTTAATCAGACTTCCCCGTGCCAGTTAGAGAAATGTACCGGTACCTGGGAGAGCTCCTTACCCGAGCGGGAGGCAGCGCTCTGGCCTCGGGACTCGGCGACGCCACTCTGCCGGCCTCGGCGTCTCTCATGCGGCTGCGGCGCTACAGCGAGGCCGTGGGCAAAGAGGACGACGACCCGAACTTCTTCCGTATGGTGGAGGGTTTCTTCGACCGCGGCGCTGCTATCGTCGAGGACAAACTCGTGGAAGACCTGAAGACCAGAGAGACGCCCGAGCAGAAGAGGCACCGAGTCCGGGGAATCCTTAAGATCATCAAGCCTTGCAACCACGTCCTGGCCGTGAGTTTCCCTCTGAAGCGAGACAACGGCGAGTGGGAGATGATTGAGGGCTACCGAGCCCAGCACAGCCAGCACAGGACCCCCTGCAAGGGAGGTATACGTTACAGCACAGAAGTGTCAGTTGATGAAGTGAAAGCTTTGGCTTCGCTGATGACATACAAATGTGCTGTTGTTGATGTACCTTTTGGTGGAGCGAAAGCTGGGGTGAAGATCAATCCCAAGAATTATTCTGACAATGAGCTGGAGAAAATCACAAGACGGTTCACCATTGAGCTGGCTAAGAAGGGATTTATTGGGCCGGGCATTGATGTCCCTGCTCCCGACATGAGCACCGGCGAGAGGGAAATGTCTTGGATTGCTGACACGTATGCCAACACTATGGGTCACCATGACATCAACGCTCACGCGTGTGTGACGGGGAAGCCCATTAGCCAGGGTGGCATCCATGGGCGGATTTCAGCCACGGGGCGAGGCGTTTTCCACGGCATCGAGAACTTTGTCAATGAAGCTGCCTACATGAGTCAGTTAGGTTTGACTCCAGGCGTTGCAGACAAGACCTTTGTTATTCAGGGCTTTGGTAACGTGGGCCTGCATTCCATGCGTTACCTGCACCGCTACGGGGCGAAGTGTGTTGGAGTAGGGGAGTGGGACGGAAACATCTGGAACCCTAACGGCATTGACCCCAAGGAGCTGGAAGACTACAAGCTGGCAAATGGTACAATTGTCGGCTTTCCCAATGCCACACCCTACGAAGGCAACATCTTGGAGGCTGAATGTGACATTTTGATTCCTGCTGCTAGTGAGAAGCAACTTACCAAGAAGAATGCCAGCAAGGTCAAGGCTAAGATCATTGCTGAGGGAGCCAATGGCCCCACCACCCCTGAAGCTGATAGGATATTCCTTGAAAGGAATATTATGGTGATTCCTGACATGTACCTCAACGCTGGTGGTGTGACCGTCTCCTACTTTGAGTGGCTGAAGAACCTGAACCATGTCAGCTACGGCAGACTGACCTTCAAATATGAGAGAGACTCCAACTACCATCTCCTCATGTCTGTGCAGGAGAGTCTGGAGAGGAAGTTTGGAAAGCATGGTGGCTCCATCCCCGTGGTCCCAACCTCTGAATTTCAGGCCAGGATTGCTGGAGCGTCTGAGAAGGACATAGTGCACTCTGGACTGGCCTACACCATGGAGCGCTCTGCCAGGCAAATTATGCGCACAGCCAATAAGTACAACCTCGGGTTGGACCTGCGGACAGCGGCCTACGTCAACGCCATCGAGAAAGTCTTTAAAGTGTACAATGAGGCTGGCCTCACTTTCACATAGACACCTGATCAGATCTGTCTGcatgtctgtccatccatctacaCAGACACGCTGCATCTTCACTGCCTCCTCCCCAGCCAAGATTCTTCAGTTTACATTTAACATATTCATGTAtaatgtttgtatgtatatggCATATGTACCATATGGCTTTGTTAAGTTTCCTTCCCTCACAGCTTTTATCCACTCTATAACACCAAAGATCTGTGTTCTTTCAACACGCCGTCATATCCATCTACTCTGAGAGTAATATCTTGCCAGAAAATGCCGAAAAGGAtggtatttatactgtataatgcacATTTTATGTTAATCTCTGCGGTGTTGTGTTCAGGGAAGTTTTAACCCCTGCTTTTCAACACATCATATGCAAAGATCCATCCAGCCTTAATACCACACAGCAGTCTATAAAACATGAGTgatcctgtttttttaattttgttgttttattttaaaggacattttttctctttaaaccAACTTAAAGGCATGCAAAGGTCAATAATGAAGGCAATGCATGGAAAATGATCTCAGGCTTTTATATGTTACCAAAATGCACAGATGTGTATTTATCTGTTCTTGCACTTGGCTTATccttttattattgaaaaatatatattacggTGCTTTTTTGCCTAATATGCAACTGTTAGCGATAGCCAAATGCTTCCATGGTGAAAGGTATGAAGCATGTCTTAATTGTAAACATGCAGAATGTATACATCCAGTATGTATATCGAAGGGATTATGTTTGGGAacaaatggtttattttcttaatcatgtGAGCATAGAAAATGAAGTGACTTTGAATCTTTTTGGGAGGAGAGTTTATATGGCTTTATTTaggataaaatgtaataaaatgtatacacAGTT

Function

symbol description
glud1a Predicted to enable glutamate dehydrogenase (NAD+) activity. Predicted to be involved in glutamate catabolic process. Predicted to act upstream of or within cellular amino acid metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including cardiovascular system; digestive system; nervous system; periderm; and pronephros. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; and hypoglycemia. Orthologous to human GLUD1 (glutamate dehydrogenase 1).
glud1 Enables anion binding activity and glutamate dehydrogenase (NAD+) activity. Involved in glutamate biosynthetic process; glutamate catabolic process; and positive regulation of insulin secretion. Located in endoplasmic reticulum and mitochondrion. Implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; and hypoglycemia. Biomarker of Alzheimer's disease.

NR:

description
PREDICTED: glutamate dehydrogenase 1, mitochondrial

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0006520 cellular amino acid metabolic process biological_process
GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor molecular_function

KEGG:

id description
K00261 GLUD1_2, gdhA; glutamate dehydrogenase (NAD(P)+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026933386.2 True 2643 mRNA 0.48 13 9976131 9994390

Neighbor

gene id symbol gene type direction distance location
psda LOC108263482,LOC108438200 coding upstream 32143 9909353 ~ 9943988 (+)
LOC117596887 NA coding upstream 69738 9904065 ~ 9906393 (+)
rufy2 rufy2,LOC107725492,LOC106612408 coding upstream 79337 9876707 ~ 9896794 (+)
tspan15 tspan15,LOC106589828 coding upstream 111190 9831802 ~ 9864941 (+)
hk1 hk1,LOC107676584,LOC107743551 coding upstream 161007 9797248 ~ 9815124 (+)
mmrn2a NA coding downstream 22093 10016483 ~ 10035390 (+)
si:dkey-191g9.5 LOC108263627,LOC108438182,LOC106606775,LOC107565930,LOC107666514,LOC107713893,LOC107743575 coding downstream 533987 10528377 ~ 10540040 (+)
si:dkey-191g9.7 LOC108263628 coding downstream 548220 10542610 ~ 10550191 (+)
dna2 dna2,LOC107743557,LOC108261390 coding downstream 578762 10573152 ~ 10588115 (+)
LOC113542239 rmdn2,LOC107747293,LOC107665610 coding downstream 690110 10684500 ~ 10723757 (+)
G43615 NA non-coding upstream 104312 9871546 ~ 9871819 (+)
G43422 NA non-coding upstream 304391 9668611 ~ 9671740 (+)
G43360 NA non-coding upstream 448972 9526861 ~ 9527159 (+)
G43337 NA non-coding upstream 480921 9494977 ~ 9495210 (+)
G43330 NA non-coding upstream 487172 9488759 ~ 9488959 (+)
G43646 NA non-coding downstream 65136 10059526 ~ 10077649 (+)
G43651 NA non-coding downstream 76777 10071167 ~ 10072098 (+)
G43663 NA non-coding downstream 99345 10093735 ~ 10101531 (+)
LOC117596896 NA non-coding downstream 167109 10161499 ~ 10163956 (+)
G43905 synpo2l non-coding downstream 247667 10242057 ~ 10247035 (+)
trnak-cuu NA other upstream 1506250 8469624 ~ 8469881 (+)
G42685 NA other upstream 1509819 8465747 ~ 8466312 (+)
naa15b naa15b,LOC108263533,LOC108434806,LOC107712022,LOC107671368,LOC107737080 other upstream 2304721 7649198 ~ 7671410 (+)
scoca scoca,scoc,LOC108263532,LOC107737083,LOC107674238,LOC103034491,LOC107556533,LOC107671340 other upstream 2345991 7620545 ~ 7630140 (+)
G42075 NA other upstream 2755108 7203950 ~ 7221023 (+)
sprn sprn other downstream 557869 10552259 ~ 10558295 (+)
LOC113543929 kmo,LOC101885014,LOC107549141,LOC107665616 other downstream 600184 10594574 ~ 10608704 (+)
dntt dntt other downstream 1105203 11099593 ~ 11207862 (+)
LOC113545306 cfap46 other downstream 1688474 11682864 ~ 11745224 (+)
trnag-gcc NA other downstream 1712545 11706935 ~ 11707005 (+)

Expression


Co-expression Network