tmem132a (LOC108262772)


Basic Information

Item Value
gene id tmem132a
gene name LOC108262772
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 8471530 ~ 8479019 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026934785.2
TACAAAGACAATAGTGTCAGAATTCTTAGTTCCACTGTATCCTCACTTTGGAGGAGCCACCATTTCCTTGTATACATTGTATATATCCTTgtatatacaaacaaacaagaaaggGAGATGAAAAAAGCGAGGGATGACAGCGAATTGGAACAGAGAAAGAGGattatttaccattttaaatgaataaatctgcaCTGTGCAGGGTAGAGtgggattgagagagagagagagagagagagagagagagagaaatagagagagtaAAATAGTTAGAAGGCAACAATCCAGGCACCAGGGCTATAGATCAATGAGAattagaaagagaaaaaacttaAACCACCATATAAACAAATGGAGAAGAGCAATTCCAAAATCATTTTCAACAAAACTAGACATTTTGGAAGCACTGGCAAAACAGGTAGCTGTTTAATTCAGTATCATagtgaaagaaaataatacacagagaaaatgcttttaaattgGTCAAGATGCCTGAAGGGAGAGGCCAAAATTCTACGTTCTGTTTCATGTTCTGGAGACACCAAACAAATGAGGGATGAAGTGATGGTTGAGCTCAGAATCTTTGGAGCGCTATATAGCACTTTGACTATGAAACTGATAATCCTCTGCTGCGTTGTGGTGCTCTCCCACACCCAGCCTCcaccttctctctccctcccagTCCAAATCTCTGTCCTTCCCCCATGGCACTCTCTCACCGTGTCTCAAGCTGATCTGAGCCTCCTCTTTACCAACTCCAGCCCTTTCTCCTTCACGCAGTCCCTGCTGCTCATGCCTCCTGTAGGAACTGACTCTAAACCAGTCCTCCATGCTACTTTTGGTCCTTACTCAGTGACTCAGCTTGTTTCTGAACCTTTAGCTCCGTTATCTGTACCTCTTGTGGCATACCTGCTTTCCAAAACAGTTGAACAAAAGTGGGAGGCTGAACGAGGGGAAGGTTTTACAGTCAGAGTGTTGTTCCATATGAAAGGTGACTCAAGCAGAAGAACATGTGTGACCCTTCATGCTTTCAAACAGACAGAGGAGCAGAAAGCATCCTGCATTGCCCAGCCTCCTCTAGGGCTGTGTGTGGTCACCATGACTTTACCCAAAGACTGGTTTAAGCCTGATCAGACTGTTCAACCACACCAGAGCCAAAGATTCAAACAACGCCATCCATACAGATCCCGATCCCCTAACCACAGCCCATGGGGAAAAAACTTGCCAGCATCTCTCAGGGCCAAACCCGGAATCCTTAGTGATATGATCCAGCTGTACTACTCTTCATTTGGCAGTGTGACCAACCATAAGATATCACCTCCTAGATGTGTGGTGGGCAAGCAGTCACAGAGAAATCTGTACTACATTGGATCTGTGGCTCTTCCGGATAAAGAAACCAAAAGTAACAAAACAACGCAAGGTTTTTCCTGCTCCAGTGAACTTGAGCAGGATGAGCTATGGCTGAATTCAGATGTACTGATTTACTATAACAAGGGGCCTGTGAGAGCTGGACAACCAGTTGGAGTCTCATTAAATCTAAGGGCGAATTTTAGTGGAGATTTCCTCATTGTGAAGCTTAAAGTGAAGAAAGGGTTACTGTCACTACAAGCCCATCCAAACAAAAACTCTCACCTGTGGGCTGTTAAAGTTGAGAAGACATCAGGCTCCAAACATGACACAATTTCCATAATCTCTCACAGAACTGGTACTGTTTTAGACAGACATGGCACCTCAGCTCTGCGACTGGTGGCTTGTCTCTCAATTGAGGGCTTACACAGGAGCTTTGGAGTCGCAATGACAGTTCCAGTAAACTGGTGGGTGGAGGACACCACGCGCAATAGGCTGGTTTCACAACATTGGGCAGTAACGACCTTCCTCTCCTTTTCGGACAGAGAGATAGTGGGCATTGCTCCCATCACAGTGAGCAACACAATAATGAACACAGCCATCTTGTCTAGCCAATCAGTTTCCCTTCCGGTCGTAGTACTGGCGGTTGGGCAGGATGGCAAAGTATTTGATATTACTGCAGCAGTAAACTGTCAATCAACCAATGAAGACATTGTCAAGGTATCAAGTGATTGCTCTGCTGCTTATGTTGATGGAAGTGAATCTGGGGTGGGCAGCACCTGTGTAGAGGTGGAGTTTTCTCTGGGCATGCTCAGAGGTTCTTTATGCCTGGCTGTGTGGGCTCCAGTAGTTCCTCTccgtatctctctctctgacactgtcCTGAGCCCCATTGAGGGCTGGAGCTACTACACAGACAGatgCATTCCAGTTTATCAAAGGGCCACCATACAGATTCTTGCACAGTTCAGTGCCCAGTCAGCCCAGGGACAACTTACCTACATGCTTGGATCACCTGATTGGTTTGTAGATGTAACAGACCTGGTTCATGATTGCCTGAGGATAGAGAACTCTCGTGTCGCAGCTCTTCATGAGCAAAATTATGTAATTGGATTAGAGCCTGGAGTTACTTCACTAAATCTGATATCTAGTCAGTGGGATGGTGTGCTTGGCACTGCTGATGTCATTGTGACCTCTGAACCTGTGGCCCCTGGTGACCTTTCTGTACATTTAGTGGGTGGTCTTGGTCTGTCAGTCACCTCAAGCTCCTCAAATCCTTCTGTCATCACAGCAACTGTGACTTCTCataacacactctataaccatGGGCAAGAAGCTTCTTTTAGTGTTTGGCTACAGTTTGGTGATGACACTGCCATTCTGCTCTCTGCGTTTAGCGAAATCCCTTTCTCTCTACATTTATCCTCACTGGCTGAATCGGTGGTTGCTATAACACCTGCCCCATCACAGCGTGTCCTTGCACAAGGAGATGGTGGAGGACCCCTTGTGAAAGCAGAACTTCTGGTCTCCACCTGTGAGCTCGTGTCTACCCACAATGAGATGGATGAGATCAAAGAGAGACATGGGACTCGGAGACTAGCCAAAGGATCAGGCTGGATAAGGGTGAATCTAGACGCAGACCTCTGGACTCTAGAAAGTGAAGATTCAGACTTTGAGATGACTGATACATCAGATACATTTGCAGAGTTAGACACAAATGTGAATCGTAACTTCGAACAAGAACAAGCAGTCCTTAAGTCCGTTAACTATGATGGAAATACAAGCAATGACATGATTGCCTGGGATGACTTGGAGAGGGCAGTGTTGACACCCAATCACGAAGAAAATGCAGTGGATTTCTCTCCTGATGTGGAGAATAGAGAAGGGAAAATTGCTAACCGAAAGTTAGTATTTGGAGTTGGAGCTGTCTTCAGTTTGCTGTGTCTCTCCTCCCTTCTGTTTTTAGTTAACTTCACGCCATGTGTGATGAGGGAACTTGGGAAGAGACAAAGTAAAGAAATGATgaaacagacagagggagagacattCACTCAGGAAGAGGAGAATGATGATAAAAAAGGGGAAGACAGGACATGGTAAGGAGAGATGATGACAGTGGAGCAAAGATGATTTTGTAAATACCCAACTTTCTGCACTTGTCCTTGTCTCTCTCAGATGAGATAAACATTTTCAGTTGTGATTtagaataaagtaaaatattgtCTTGTCAGCAGTTTAACATAAATGCAAGAAACACTATCCTCTTTTTTTGATAGAATTTTTTGCTGCTTAGCCTAATCTTATGT

Function

NR:

description
transmembrane protein 132A-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026934785.2 True 3653 mRNA 0.45 13 8471530 8479019

Neighbor

gene id symbol gene type direction distance location
trnam-cau_3 NA coding downstream 2388 8469071 ~ 8469142 (-)
trnam-cau_2 NA coding downstream 3423 8468036 ~ 8468107 (-)
trnam-cau_1 NA coding downstream 4475 8466984 ~ 8467055 (-)
htt htt,LOC107679870 coding downstream 201413 8220599 ~ 8270117 (-)
dok7 dok7 coding downstream 348260 8083051 ~ 8123270 (-)
vps37c LOC108262788,LOC108426122 coding upstream 15117 8494136 ~ 8505726 (-)
LOC113539365 NA coding upstream 74438 8553457 ~ 8562707 (-)
LOC113539349 NA coding upstream 87542 8566561 ~ 8573850 (-)
kdm2aa LOC108262769,LOC108434796 coding upstream 103171 8582190 ~ 8604478 (-)
zgc:165520 zgc:165520,LOC108262789,LOC108434798,LOC107746898,LOC107749989,LOC107679874,LOC107552638,LOC107674222 coding upstream 126070 8605089 ~ 8610844 (-)
G42671 NA non-coding downstream 90815 8380340 ~ 8380715 (-)
G42665 NA non-coding downstream 172086 8299180 ~ 8299444 (-)
G42650 NA non-coding downstream 267125 8204197 ~ 8204405 (-)
G42642 NA non-coding downstream 281254 8189735 ~ 8190276 (-)
LOC113544822 NA non-coding downstream 491767 7977141 ~ 7979763 (-)
G42894 NA non-coding upstream 14049 8493068 ~ 8493304 (-)
G42914 NA non-coding upstream 72111 8551130 ~ 8551355 (-)
G42970 NA non-coding upstream 275132 8754151 ~ 8754896 (-)
G42987 NA non-coding upstream 288969 8767988 ~ 8769186 (-)
G42994 NA non-coding upstream 378239 8857258 ~ 8861508 (-)
trnae-cuc_7 NA other downstream 1101 8470358 ~ 8470429 (-)
trnam-cau_4 NA other downstream 1473 8469986 ~ 8470057 (-)
rgs12b rgs12,rgs12b,LOC108443250,LOC107749922,LOC107679871,LOC107551217 other downstream 254979 8134641 ~ 8216551 (-)
maml3 maml3 other downstream 881867 7438904 ~ 7589663 (-)
lef1 lef1,LOC103361279 other downstream 1266831 7161474 ~ 7204699 (-)
LOC113539440 NA other upstream 4284 8483303 ~ 8492983 (-)
zdhhc5a zdhhc5a,LOC108262777,LOC108412478,LOC107551501,LOC107730508,LOC107664565,LOC107746524,LOC107556824,LOC107674225 other upstream 275895 8754914 ~ 8783798 (-)
G42967 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 322224 8801243 ~ 8853794 (-)
sf3b5 sf3b5 other upstream 745857 9224876 ~ 9228884 (-)
sncga sncg,sncga,LOC108438198,LOC107601819 other upstream 1520940 9999959 ~ 10008561 (-)

Expression


Co-expression Network