inpp5f (inpp5f,LOC107666413,LOC107726944)


Basic Information

Item Value
gene id inpp5f
gene name inpp5f,LOC107666413,LOC107726944
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 13385486 ~ 13404675 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937959.2
TGTTCTTCATTGACGGGGGGAAAATATCACAGCCCAAGTCAGGCACGACTAGAGCTATCTCCTGTTTGACTCGTGTTGCTCAAATGTCTTCGCTGATATCAGAGGGAAACAGGTTAATAGCGCTAAGAAGAAATTAGACTGACGCAATGTTAAGGTTTATTAGTGTAGTAAACGCTAATAGGTAGCTGGAAggtgtgtgttatctgtgtgAATAGTCTGAACTGTCATTTATATCAGGACTAGAGCGGGTTAGCTAGCCGGCTAACTACCTGAGCTGGCGGCTCTGATGCGCGCTCTCCGGTGTCTCGGAGCGGACGTGTTCACTGAGCAGTAGCTGCATGGTTTtttcacttgacttgacttgacgaCGACATGGAGCTGTTTCAGGCCAAAGACCATTACATCCTCCAGAGTGGAGACAACGCTCTGTGGTGCAGCAGGAAGGACGGCTCCATGGCCGTGAGAGCCGcaACTGACCTGCTACTAGCTTGGAATCCAATATGTTTGGGGCTGGTGGAGGGCGTTATTGGAAAAATTCAACTTCATGCTGACTTTCCTCTGGGCCTGATTCTGATCCGCCAGAAAGCACTTGTAGGTTTACTGCCAGGAGAACACAAGGTGTACAAGATCACAAAAATAACCGTTATCCCACTCTCAGATGATGAACCACAGGATCTGGAATTAGAGCTTTGTAAGAAGCACCACTTTGGGATCAACAAACCCGAGAAAATTACCCAGTCTCCAGATGATTCTAAGTTCCTGCTGAAGACTCTGAGTCAAATCAAGTCTAATGTTGCTGTTCCCATCAAGAAAAAGGTcaaagagaataaagaaaagGAGCGCCTGGAGAGGAGACTGCTTGATGAGCTCTATAAGATATTCATGGACTCCGATTCCTTTTACTACAGCCCCACTTATGATCTTACAAATACTGTGCAGAGACAGGGAGCCTCAGACAAGTCTGATCTGCCCCTTTGGAAACGGGTTGATGACAGATTCTTCTGGAATAAACACATGATACAGGACCTAATTAACCTACAGGTTCCTGAGGTGGACTTTTGGGTGATCCCCATAATCCAAGGCTTTGTTCAGGTGGAGGAGCTGGTGGTGAACTACAACGAGAGCTCAGATGAGGAAAAAAGCAGCCCAGAGACACCGCTGCAGGAGCAGCACACCTGTGTGGACGACATTCACCCACGCTTTACGGTGGCTCTCATTTCCAGACGCAGCCGTCACCGCGCtgGCATGCGATACAAACGGAGAGGAGTGGACACTGATGGACGTGTGGCCAACTATGTGGAGACAGAGCAGCTAATCCACGTGCATAATCACACGCTGTCATTTGTGCAGACACGAGGCTCTGTCCCTGTGTTTTGGAGCCAAGCTGGGTACCGCTACAATCCCAGACCACGTCTAGAGAAAGgagagaaagaaaccACTCCCTATTTTGCTTTGCACTTTGAGGAGCaacttaaaatttataaaaaacagGTCATAATCAATCTGGTGGACCAAAATGGGCGGGAGAAGTTGATTGGTGATGCATACCTTAAACAGGTGCTGCTCTTCAACAACCCCAACTTAACCTACGTCTCATTCGACTTCCATGAGCACTGtCGAGGGATGAAGTTTGAGAATGTCCAGACGCTCACCGACGCCATCTCTGACATCATCACAGACATGCGATGGGGCTGGGTGGACCAAGCAGGAGTCATCTGTACACAAGAGGGGATTTTCCGAGTTAACTGCATGGACTGCCTAGACAGGACTAATGTAGTTCAAGCAGCTATTGCGCGTGTGGTCATGGAAAAGCAGTTGAAGAAACTGGGGGTGATGCCCCCAGAACAGCCACTGCCCCTTAAATGTTACAGGATCTACCAGGTGATGTGGGCCAACAATGGAGACACCATCAGCCGCCAGTATGCTGGCACAGCTGCTTTAAAGGGCGATTTCACACGCACAGGAGAAAGGAAACTAGCCGGAGTGATGAAAGACGGTGTGAACTCTGCCAATCGCTACTATTTGAACCGATTCCGTGACGCATACAGACAGGCTGTCATCGACCTCATGATGGGCCTCCCTGTTACTGAGGACCTGTATTCTATCTTCAGCAAAGAGAAGGAGcatgaggagaaagagaaagagagccaGAGAGGAGCACAGGAACAGGTCAGCCTCCTCCTCCAGACGTACATGCAACTACTGCTGCCAGATGATGAGAAGTTCCATGGAGGCTGGGCCCTCATTGACTGCGACCCCAGTCTTATTGATGCGACACACAAAGACGTGGAcgttctgttactgctgtccaACTGTGCATATTATGTTGCTTACTATGATGAGGAGACAGATAAAGTTAACCAGTACCAGCGTCTCGGTTTAGAAGGATTGGAAAAGATTGAAATAGGCCCAGAGCCTACTCTCTTTGGCAAACCCAAATACTCCTGCATGAGACTGCATTATAAAAATGGGGAGATTAGTGGCTATTTTCACACCCTGAGGGCTGTGACACGGAACCCAGAAGATGATGGAAAAGACACCCTGCAGTGTATAGCAGAGATGCTCCGCATAACTAAACAAGCAATGGGACTTGACCTGCTAGTCATAGAGAAGAAATTGGAAAGGAAGCACAGCAAACCTCACGAAGACATCCTGGGCATACAGGGAAAAGCCACTGAGCCAATACTTGGCTCAGGCTTAGCTCAGGGCAAAAGTTTCTTCTTGAACAAATTCTCGTCCTTAAATCAGAAAGTAAAGCAGACAAAAACTAACGTAAACATTGGAAACTTCAAGCCCCTCGGCAGACTCGAGATGAAGGTGAACTTCCTAAAGCCCAACATGAGGGTGAACCTTTGGAAATCAGACAGCAGTTTGGAGACTTCTGATGGCAATCCAGGCCCTGGAGCTATGAAGGACCTTTGTAATGATCGTTCAGATCTAGAGATCTCTGACGACTCTGACTCTTATAACTCAGATGAGCAGCCATGCTCAGGTTCCCTGGAGAACATTGACTATGTGCTCCCCAGTTGTGGGATTGTAGCATCTGCACCTCGACTTGCCAGCCGGTCCCAGTCCATCGGAAGTGTTGAACTCGCTGTCCCCTCTGTTATTCGTGTCACAAGTTGCGAGAACAAGGTAGAGGACAGCTTGTCAGTTGAACCAAACTCTCAGTCACCTGGCGAAGCTTCAGAAGCAGAGGAGGCCATCTTGATTGACTTTGGGACACCAATTGATGCTTACTGCCACCAGTTTGTCCAGGATGCGCAGACCAAACCAGTAGAAGTGTTCGAAGAACGCCCGGTGCTGCCACTAAACCCGCAAGCACCTGAGGGTCTCAAAGCACCTCCAGCTTCAGGCTCAAAGCCAGAAACCTCAAACACCCAGCAGCAGCAACTCCCTCGTCCATCTCAGCTCGATGTGGAGCCTTCAGTCTCAGGAGGAAAACTCCTCACCGTCCAGCCCCCAGGTTCTGCCGCATCATGTAGCTCCCAAAAGAGCCTTGGCTCCATCTTGGAAGGGAGTCTAGGACCTTCTCCAGCAGACAGTAATGGAAGTCGTGTGGTGTCCCCCTTTGCTAAGATTAAGAGCTCTGTGGTGCAAGTGGCTAGCATGACCCAGGCTGGACTCACTCAAGGTATCAACTTTGCTGTGGCGAAAGTTCAAAAAAGTCCAGAGCCTGATGCTGTCAATGAAACACAGCAGAATGAATTGCGAGCTATGTTTACACAGTGCCAGACTAGGATCATTCAGATATAATATGTTCGTTTGGCCTCATACAGATGCATTTTTAGTGTAGAATGTAACTTCTAGCACAGTAGCAGTAGCATAAGTTTGCACAAAAAAAGTGTACAGTCAATTACTCCATATTTCTGCTCCAGTTAATGTAACTTATGTTTACAgccagtgttgtgtagtgtatatatagtacACCTAAGCTGAACCTGACTGTGCCCTTATTCTGAGTAAAATCCTTAACATTCATACATTGCTGGTCTTGCATGTAGAGAAATATTAGGTAGATTGGGGCAAGCAAGTTTTACTGCATGTCGAGAGTCAAGATCTAGTTTAGTCACGTGTGACACCTGCTGTGCAGTACTCTTCTTTGCATCTGTTGAGTGTTGTAGCTATAGCCGAATCGTATACCAAGTCAGACTCTAATATCTGTTCGATGGGCAGCTCAGTATTAGACAGTAGAAAAGGAGGAAAGTAAACAAAGCTCCATATAGgtaaagaaatatatttgttGTGTTAAATGTCAATAGAAATGTACCAACGTAGGACCatacttttctactttataATCTATGGTAAAATATTGTCCAGTAAAATATTCTTCAGAAGTAGGGCCTTCCACTTAATATATTTAGACAGaacacatatatttacataaaatttacTGATTGTGATGATAGGAAAGTTGCCACTTCAGATGGACATTTGAGGCACTTTGAAGTCCTTactaacatttctttttttttttaattagccgTCAAATTTGAAAGCGTTTGCATAAAGGTACAATAAGTAGAAGATTCATCAAAActtgaatattaaattattGGTAGTAAATATCAAGTGGAACATTAGATCAAAAGCGCAGACTCTTTATCTTCTTGCTTTGgattttattgtatattgtgCTAAATACATGTaaagttgattatattccttGTGCTGCTAAAAAAGCTACAGCTTGGTAACAAGACTCATAAGCGAATTACTTATTGTACCTTTAATCTTGTGaggaataatatatttaatattatgaatattattttattttctagatTATGCAAGTAACCTGCttagttttttcccccagaaatGCTGTAGGATAATGGTAAAGTGGTCAGTGTCTTAAATTATACttgtgtaaaatgtttcattctttCAGGAGGGTTTATTTGCAAGGCAAACCTGCATCACATAGTTGCTTGacaaatatattttgatattcaaacGTAAATATCAACTTCACAGTTGTCTGTGTATAAGGATAAATGAGTAATATGTGTTATTTATGAATACATAGAGTACTTTGACTGCTTTAAGCTATTATTTGATGCAGGTCAGATGTAAAGGACCCAGGCCAAACAtgaaaacactgtaaaatgctttttgcactctgatatttatatatcaatAGTCTTATCATATTATTAGGTGCAGGTATTTTTGACATGTATgactttatatttaatgtcatttttcatttttattcaggtTATTTTGCTGCATCTTGAGTGTAATAATTTCTGGTTTTGTCACATCAACAACATGCTCATTGATATGTCCATGCTCAGGCTTGAGGTATGACCATTAGTGTGCTTTAATTGATTTTAAAGCAGGCGATCAGTACTGTTTGAGGTGGTACCTCAAATTCACCACCCTTTATGCTGTATCTATGTTTCTGggaaatttgaatttaattagGCAGTTATTGATATGAATGAATTATGTACATGTATCTATATTTAAAGGGACACTCCAGCAGCAAAGAAATCATCAATGGAAccatttatctatttttttctaaacacatCTACTTGCTTCTTTTAGTGGTGATTCAGTCACCAGAGTAAGAAGAAGCAGTTTTAATACTAGGGCCACCCCTCCTGATGACAGCTCTAACTCGCTCGACAAAAGAGCTGAGGAACAAGTAATAATAAGGTCTTCCCACATTAATCAGGGCCAAGGAACTAAAGTATACACTTTGTGTTTATAGTAAGATACATTAAATCCTATGGGGTCTGCGAGTTTTAAATTTAGTTACATTGGTGGGAATCACAAtccaaagttattattattgttatgttcttatatttattagcaTATTTGACAGCTCACTTGAATTggatgggtttaatccaaacctcaataactcacaTTTAAATAGTGAACCTATGATTTGAATAGTCAGATTAtgtgcataaaataaatctgacctGAAGGGGTCTGTAGAATATGGATTTCATTTAAAGGATTTCATTTGAAGGACCAAAATGTTACAGGCATTGTGCTAAATAAAAGGGTGACTACCCTCTAGCTAGCTACACATGATAGACTCATCAGATTGAAGTGGCAAGATATTTGTTTCCAGTTTGCTTTTTGTGGAATAAAGATGGAATTCAGGTTTTCCATCAAATCCTTTGTGGGGGATATTGCAGTAGTTTTCAGATGTTTCTCTGTACTTTGGACTGAGGTACTCTGCACTCACCTTTAGTTTTCACCTATTCGTATTTAGCTGCACtgaatatctttaaaaaatagtaataataatcttGTTCCATAACCAGAATGATTGAGCTATACTGCTAATGCTAGTACTGGAAGTATTTTTGAATCGGGTGCTTGCAGTGAGGATTCTTAATGATTGTTTAACATCTGTATAGACAAAACAGGAACAGGCCTGACTGCtacaataatacataattatgaATTCTGATAAAATGCTGAGATGTGATATTGTAATACAGAATAACATGTAACATGGCAAATACACTAAATAATATCAATATGTCAGAATGCTCCTTTAAATGATATGCATATTGACAGGCTAGTCTTTAGGAAGCCAGAAccatgaagatttttttttttttttttttttgtgccttaAGGGCTCACCTTGACTCTGTGACTCATGATGAGAGCTGATAATTACAGCATGCTTGAGGATGTGTAGGTCGCTGAAGCGAATGGATTATAAGTGGTATTTTTATAAACCTGTATCTTGAGGATCAGACAGTATAGTGTGAGTTAAAACAGCGAGTTATATGGTCCAGTTGCTGTACTTAAAGGCAGACAAGAGTTATATGGATAACCCAATAATTCTCACTATATACAATATGTCTGCCATGTAGCAGAAACTGGGCTTGTATGAAACCTCAAAATCAATCTGGAATAGACCACAGATGGTTTCAATTCCAGGGGTCTAGTCCATTAAAGACTGGCATTGCATCTGTACAACACCCTTCATCTTGTAGGTGGTGAGCCCACAGGATGGTTCCATGTCACCATTTTGGATTGAGCTTAATGGGCAACATGAGTGGCCTGATCACCAGATGCTCGCCTGCACAAAAGCACCCCCAGGCCTGACTCCATTTTGGGTCAAAGTAACCCAAATTCTGGCATGGTACTCATAGTCTTTTTTGTACCATTCATGGGGGTATTTAggatctctctctgtctgaccaCTCCCCTCAGATCTGGTCATCATGGGTGGCCCTACTTGTAGCATTAAGCGCCCGGTGAGACAGCCCTGAGGTTCACCAAAATCCACAAGCTCCTTCAAAAAAGTTTTTCCATCCAAGAAGGAGAGAAGGTTATATAACTCCTGTTTCATATAATGAAACACATGGTCATCTCAAGCCTGAGGGAGGATGGATAAGTGTTTTATGGACTGCACTTTTTGAACTTGGTTTTGTTTTATGCTTAATGGTTATAtgttactgtaattactgtaatttgAGATGCAAATTAGGTATCGACATCAAGCCATACAACTGACATTTCAACAATACCTGTAGCATCATTCTGCTACCTGCTGACTATCTGAATATTAACATGATGGTTGTAATACAGGTTTGATTTGATGTATGCTGGGAAATGGGTTTTGCTTATAGGTTTATTTCAGAAGGTTTCTATAGGTTACTTAAGAATTCGAGATGGCATGCACTGGACTGGAATTTATTCTAATGCTATTCGAATAATTTAGAATATTAGTACAAGGCAGTGGTACATAAATGTAAACCTATTCAAGGAGCTGTTTTGTGTAAGTAAACATTCCTGTTGTTCCATTTATGTTGTATTTTCTATGCATAAACAGGTGCACCTTCCTTGTTTTGATTCACAGAATTTCCTGAAAGGACCATACTTTCACACCAAGTGCTTTGGAAACCATGTATAATTTGCCATTACCACTTTGTCGTGTAACTGACATGTATAattgaattactttttttttttttatctctgaaaatgtttttgacttATGTGTTAGGCatcatttaaacacttttcatcatctcatgtgtgtgtgtgtgaatgacttCTTCCACAAAAGTGTGAAAGATATTTTCATTCTGTACCCAGAATTTAATTGCATTGTATAATGGTCCATTTATTCCTAATGCTTACTCACTCTTAACCCCCTGTATTTGATAACAATTGTGTAAAActgctgtattttaaaatattatgtcTTATTTGGGAGGctttttaagtaaatcattcaAAGCAAA

Function

symbol description
inpp5f Predicted to enable inositol monophosphate 4-phosphatase activity and protein homodimerization activity. Predicted to be involved in clathrin-dependent endocytosis and regulation of endocytic recycling. Predicted to be located in clathrin-coated endocytic vesicle; early endosome; and recycling endosome. Orthologous to human INPP5F (inositol polyphosphate-5-phosphatase F).

NR:

description
phosphatidylinositide phosphatase SAC2-like

GO:

id name namespace
GO:0042578 phosphoric ester hydrolase activity molecular_function

KEGG:

id description
K21798 SAC2, INPP5F; phosphatidylinositol 4-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937959.2 True 8240 mRNA 0.41 20 13385486 13404675

Neighbor

gene id symbol gene type direction distance location
bag3 bag3 coding upstream 2143 13376724 ~ 13383343 (+)
pkd2l1 LOC108263119 coding upstream 19419 13359076 ~ 13366067 (+)
atoh7 atoh7 coding upstream 29054 13353569 ~ 13356432 (+)
si:dkey-51a16.9 LOC108263124,LOC108426796,LOC107559326,LOC107655434 coding upstream 39380 13339258 ~ 13346106 (+)
LOC113543782 LOC108263125 coding upstream 47152 13333341 ~ 13338334 (+)
sec23ip sec23ip,LOC107655440 coding downstream 15273 13419948 ~ 13430260 (+)
bcl11aa bcl11a,bcl11aa,LOC107666449,LOC107601892,LOC107559339,LOC107743494,LOC107655449 coding downstream 183641 13588316 ~ 13633478 (+)
fancl fancl,LOC107585345 coding downstream 630963 14035638 ~ 14056463 (+)
soul2 NA coding downstream 789159 14193834 ~ 14197074 (+)
si:dkey-187a12.4 LOC108263835 coding downstream 884707 14289382 ~ 14292863 (+)
G45640 NA non-coding upstream 9487 13375799 ~ 13375999 (+)
G45594 NA non-coding upstream 72265 13312994 ~ 13313221 (+)
G45592 NA non-coding upstream 73406 13311677 ~ 13312080 (+)
G45508 NA non-coding upstream 289605 13095671 ~ 13095881 (+)
G45473 NA non-coding upstream 332957 13052240 ~ 13052529 (+)
G45712 NA non-coding downstream 117164 13521839 ~ 13599015 (+)
G45713 NA non-coding downstream 118231 13522906 ~ 13594825 (+)
LOC113545747 NA non-coding downstream 239445 13644120 ~ 13645338 (+)
LOC117596881 NA non-coding downstream 484604 13889279 ~ 13889849 (+)
G45875 NA non-coding downstream 489467 13894142 ~ 13896535 (+)
si:ch211-223p8.8 si:ch211-223p8.8,LOC108262662,LOC108426807,LOC107552909,LOC107743613,LOC107552922 other upstream 351136 13032050 ~ 13034350 (+)
col17a1b LOC108263226,LOC108426809 other upstream 380163 12982406 ~ 13005323 (+)
spef1 spef1 other upstream 448184 12929559 ~ 12937302 (+)
LOC117596823 NA other upstream 742182 12639317 ~ 12643304 (+)
trnay-gua NA other upstream 749080 12636320 ~ 12636406 (+)
pcbd1 pcbd1,LOC107743500,LOC107601888,LOC107655445,LOC107559335 other downstream 93373 13498048 ~ 13501050 (+)
slc24a3 slc24a3,LOC107693448,LOC107718828,LOC107716313,LOC107673935 other downstream 808694 14213369 ~ 14286542 (+)
cgas NA other downstream 956692 14361367 ~ 14368100 (+)
borcs7 borcs7 other downstream 1567893 14972568 ~ 14974068 (+)
eif4ebp2 eif4ebp2,LOC107564345,LOC107668794,LOC107716353 other downstream 2388731 15793406 ~ 15797204 (+)

Expression


Co-expression Network