fam204a (fam204a)


Basic Information

Item Value
gene id fam204a
gene name fam204a
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 30705014 ~ 30719700 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026939200.2
TCAGCCTCTTTCGCCAAATGCGGAAGTATGAACAATAACAATGGCTATTTCTAAAGCCGCATCATGACTATACTAAATATTAACTTTATGTCAAAATATTGCCAAAATAGATGATGTTAGTCATGTAAACTGAAACCGGATATATTTATAAACCCGAAAATAATCTTATGTAAAGTGAAATTAATCAAAACAACTGAAAATAAAGCTTAGAGCTAGACAGAGCGTGGCATGTATAGCGGTTTCCTTCCGAAGGGACTCAGTGAGGCTGATTTGAGTCCtgatgaggaagaagagaacACTCAGGAGAAGCAGAACAAACTAATTGGCACTGAAACTGAGAAATGTCCTGCTGAGAGCGAGCAGAATGTACAGAATgacttatcatcatcatcatcatcatcatcatcatcatctcctcctGACAGCTGTTTGCCAGGAGTGTCTCAAGATCTGTGGCAAAAATTTAAAGACCTGCAGAAGGAAAGAGTGATTCAGAAAATGGATCAACCCCCAACAAGAAAACGAGGGAAAAAACGGCACAGAAAAGGTGGCACTCTGAAGCAGGCGAGTGATGCAGAAGAGAAAAGGGATGGTGAGGAGTCGGTGAAGCAATGGGAAGAACTGACCCAGTATTTCGGCACCAATGATAGATTCCAGCCCCCTGCCAGTAGCCGGCCTTCGCCAAAGTCAGGCCTGGAAAAGAACATGGAGCGAGCCATCGCCGAAGGGGATTATGGGAAGGCGGAGGAGCTGAGCGACCGGCTGGCTACTCGTGAGCTGGCTGTGAAAATCGCTCAAGCTGCCGACTGCCGCGACTTCGCCCGAGCCAGACGGGAAGAGGAGGATTCACGGGCAGCACGGAAAAAGAGGAAACAGATCGCATGGGGCTTTGAAGCAAAGAAAAGGTGGGAAACCAAAAGCAACATGGGCTACATGTGATGTTTCAGGAgaaataagaattttttttaaatatatttgaattaatTTGCTTTTCTATGGTATTTCCAATGGCAGTGAAAACCTGTACATGGTTAGTTAAATAAACGACTTAACCTTAACATTA

Function

symbol description
fam204a Orthologous to human FAM204A (family with sequence similarity 204 member A).

NR:

description
protein FAM204A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026939200.2 True 1063 mRNA 0.44 8 30705014 30719700

Neighbor

gene id symbol gene type direction distance location
LOC113542166 rab11fip2 coding downstream 62856 30623249 ~ 30642158 (-)
LOC113542134 LOC108263607 coding downstream 246894 30447258 ~ 30458120 (-)
rhd LOC108263215 coding downstream 327965 30368672 ~ 30377049 (-)
eif2ak2 NA coding downstream 352720 30345121 ~ 30352294 (-)
chp1 chp1,LOC107724623,LOC107734301 coding downstream 529894 30163347 ~ 30175120 (-)
LOC113541964 NA coding upstream 26532 30746232 ~ 30753678 (-)
trnag-gcc_2 NA coding upstream 35706 30755406 ~ 30755476 (-)
gfra1a gfra1a,LOC108263696,LOC107666504,LOC107568111,LOC108442611 coding upstream 201205 30920905 ~ 31006462 (-)
si:ch1073-126c3.2 NA coding upstream 302961 31022661 ~ 31025845 (-)
LOC113541870 LOC108263097 coding upstream 799340 31519040 ~ 31524900 (-)
G55449 NA non-coding downstream 81809 30619177 ~ 30623205 (-)
LOC113542125 NA non-coding downstream 86827 30504336 ~ 30618187 (-)
G55400 eif3a non-coding downstream 227404 30472604 ~ 30477610 (-)
G55351 NA non-coding downstream 290545 30355571 ~ 30414469 (-)
trnag-gcc_3 NA non-coding upstream 132237 30851937 ~ 30852007 (-)
trnag-gcc_4 NA non-coding upstream 140736 30860436 ~ 30860506 (-)
G55992 NA non-coding upstream 603454 31323154 ~ 31323464 (-)
G56173 NA non-coding upstream 913395 31633095 ~ 31633326 (-)
LOC117596876 NA non-coding upstream 937351 31657051 ~ 31675951 (-)
rsrp1 rsrp1 other downstream 360476 30340399 ~ 30344538 (-)
runx3 runx3 other downstream 451558 30198325 ~ 30253456 (-)
khdrbs1a khdrbs1a,LOC108263614,LOC108426153,LOC107679143,LOC107597656,LOC107724614 other downstream 543790 30152908 ~ 30161224 (-)
G55209 LOC108263435 other downstream 582192 30111831 ~ 30122822 (-)
cdh23 cdh23,LOC107679169,LOC107676383,LOC106579432,LOC107586104,LOC107549130 other downstream 593853 29879295 ~ 30111161 (-)
LOC113541990 NA other upstream 826201 31545901 ~ 31548633 (-)
G56150 lclat1 other upstream 843855 31563555 ~ 31600685 (-)
fndc5a fndc5,LOC106918218,LOC106948404 other upstream 958683 31678383 ~ 31830932 (-)
G56272 NA other upstream 1108114 31827814 ~ 31829484 (-)
G56303 NA other upstream 1117482 31837182 ~ 31838235 (-)

Expression


Co-expression Network