LOC113543929 (kmo,LOC101885014,LOC107549141,LOC107665616)


Basic Information

Item Value
gene id LOC113543929
gene name kmo,LOC101885014,LOC107549141,LOC107665616
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 10594574 ~ 10608704 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026942473.2
GTCCTTCATGTGTTTACACATCAGTTCATCTACCTGAACAAACAAAACTCACAGGGAGCTGgcatttttcttaaattttttttcttacttactATTATTGGTTTGCTTGAAAAGGTTGTGGATATCTACTGACACAGTGAGTTCTTTTCTGAGATAAAGTTAATCTGTACCAACATGGACCACTCAAGTGAGAAGAATAAATCAGCCACCAAGAAAAAAGTAGCTGTAGTAGGAGGCGGCTTGGTTGGTGGCTTAAATGCATGCTTCTTTGCAAAAAGAGGATTTGAGGTTGCAGTCTTTGAATCTCGAGAAGATATTCGCCGTGCCAAAACAGTAAAGGGCAGGAGCATAAATCTAGCCCTCTCCCATAGGGGACGCCAAGCTTTAAAACATGTTGGAATGGAAGACAAGATTGTTTCCAAGGCCATCCCAATGCATGCTCGTATGATCCACAGTGTGAATGGAAAACGTTCTCCCATACCATATGGAAAGAAAGGTCAGTACATCCTTTCTGTAGGCAGAGCCAACCTCAATAAAGAGCTGCTAACAGCGTCTGAAGCATATCCAAACACACAATTGAACTTTAACCATAAACTGCTTGACTGGAATCCAGAAACAGGGACCATGACCTTTCTTGGGCCTGATGGTAATGAAAAGGAGATCCAGGCAGATCTCATAGTGGGCTGCGACGGTGCCTTCTCTGCCACTAGGAAGCAGTTTTTACGCCGCAGTCGCTTTAATTACAGCCAGACCTACATCCCCCATGGATACCTTGAGCTCACTATGCCTCCAAAAAATGGTGATTTTGCAATGGAGCCCAATTTTCTTCATATCTGGCCCAGGAACACATTTATGATGATTGCTCTCCCGAACATGGACAAGACCTTCACCTGTACACTCTTCATGCCATTTGAGGAATTTGAGAAGATTACCACAGGCGATGAGCTGATGAACTTCTTTCAGAAATACTTCCCAGATTCCATCCCACTCTTAGGAGTtgaagCTCTAAAGAGGGACTTTTTCCAACTGCCTGCCCAGGCCATGGTGTCAGTGAAGTGCTCTCCGTATCATCTGAACGACAAATGTGTCTTAATGGGGgatgctgctcatgctgtggtGCCATTTTATGGCCAGGGCATGAATGCAGGCTTTGAGGACTGCCTCGTTTTTGATGAGATTATGGATCAGTTTAATGAAGAATTCTCTGCTGTTCTCCCGGAGTTCACACGAATTCGTGTACCTGATGATCACGCCATAGCTGATTTGGCTATGTACAATTATATagagATGCGAGCGCATGTGAACTCCAAGTACTTTCTGTTCCGTAAATATCTGGACAATGCACTCCATTATATCATGCCGAGAACAATAATCCCATTGTACACAATGGTCACTTTTACCCGAACACGCTATCATGAAGCAGTGATCCGCTGGCAATGGCAGAACAAGGTGATTACTCGGGGCCTGTTGCTTTGGGGGACATTGTCTGTAGTGGGACTGACTTATCTGCTAATCAGATACATTCCCAAAAAGCCCAGCATTACTGTGGAGCAGCTATGGAGCAGACTTCTCACCCTTGTCTGGTTCCAAAAATATTTCATTGTAGGAAAATGGAAGGTCATTTCATGGTGTCTGCACATGACTCGGGATCATTGAACTGAGAATCCAGCAAATGGAAGTGGAAAGAAGcttatatatGCCTGTCATCACGGCTCTGTGACATCACGATGGGACGTACTGGTTGGCTGGAGCAGGTCAGGGGGTGGTCCTTAATGCCACACTGCAGGTGGGCCAGGCGGGAGCACAGCAATTGCAACATGCAACGCCGAAACTAGcaaagaatacacacacatgcagaaggATAAagacacatgacacacaaaACTATATCttctattatatattttttcatttattgacATTCATGACATACTAATGTCGagactgtatgtactgtatgtgtcatTGTATTTCCCCAGGTCATGATTTCTTACTCAAAAGTATAGGTCTAAAGTCTAGTGTCTTCACCTTCCTGCTCATGAAGCCATATATAATTGGGTTATAAGCTGTGCTGGACTTGGCGAAGACTGAGGGGATGATGGCAACAGTGGGCGAGACGACACTCTGCTTGCCAAAAGCTACCAGCATGGAGACCACGGCATAGGGTGTCCAGCACAGCAGATAACAGAAAATCATCAACAGGAACATGGTGGCCAACTTCTTCTCATAGCGTAGGACCTTAATGATTTGCAATGTCTGCAGATCCTCAATGGAGCGCAACTACAGTAATAaatggagagaaaggga
>XM_034303118.1
GTCCTTCATGTGTTTACACATCAGTTCATCTACCTGAACAAACAAAACTCACAGGGAGCTGgcatttttcttaaattttttttcttacttactATTATTGGTTTGCTTGAAAAGGTTGTGGATATCTACTGACACAGTGAGTTCTTTTCTGAGATAAAGTTAATCTGTACCAACATGGACCACTCAAGTGAGAAGAATAAATCAGCCACCAAGAAAAAAGTAGCTGTAGTAGGAGGCGGCTTGGTTGGTGGCTTAAATGCATGCTTCTTTGCAAAAAGAGGATTTGAGGTTGCAGTCTTTGAATCTCGAGAAGATATTCGCCGTGCCAAAACAGTAAAGGGCAGGAGCATAAATCTAGCCCTCTCCCATAGGGGACGCCAAGCTTTAAAACATGTTGGAATGGAAGACAAGATTGTTTCCAAGGCCATCCCAATGCATGCTCGTATGATCCACAGTGTGAATGGAAAACGTTCTCCCATACCATATGGAAAGAAAGGTCAGTACATCCTTTCTGTAGGCAGAGCCAACCTCAATAAAGAGCTGCTAACAGCGTCTGAAGCATATCCAAACACACAATTGAACTTTAACCATAAACTGCTTGACTGGAATCCAGAAACAGGGACCATGACCTTTCTTGGGCCTGATGGTAATGAAAAGGAGATCCAGGCAGATCTCATAGTGGGCTGCGACGGTGCCTTCTCTGCCACTAGGAAGCAGTTTTTACGCCGCAGTCGCTTTAATTACAGCCAGACCTACATCCCCCATGGATACCTTGAGCTCACTATGCCTCCAAAAAATGGTGATTTTGCAATGGAGCCCAATTTTCTTCATATCTGGCCCAGGAACACATTTATGATGATTGCTCTCCCGAACATGGACAAGACCTTCACCTGTACACTCTTCATGCCATTTGAGGAATTTGAGAAGATTACCACAGGCGATGAGCTGATGAACTTCTTTCAGAAATACTTCCCAGATTCCATCCCACTCTTAGGAGTtgaagCTCTAAAGAGGGACTTTTTCCAACTGCCTGCCCAGGCCATGGTGTCAGTGAAGTGCTCTCCGTATCATCTGAACGACAAATGTGTCTTAATGGGGgatgctgctcatgctgtggtGCCATTTTATGGCCAGGGCATGAATGCAGGCTTTGAGGACTGCCTCGTTTTTGATGAGATTATGGATCAGTTTAATGAAGAATTCTCTGCTGTTCTCCCGGAGTTCACACGAATTCGTGTACCTGATGATCACGCCATAGCTGATTTGGCTATGTACAATTATATagagATGCGAGCGCATGTGAACTCCAAGTACTTTCTGTTCCGTAAATATCTGGACAATGCACTCCATTATATCATGCCGAGAACAATAATCCCATTGTACACAATGGTCACTTTTACCCGAACACGCTATCATGAAGCAGTGATCCGCTGGCAATGGCAGAACAAGGTGATTACTCGGGGCCTGTTGCTTTGGGGGACATTGTCTGTAGTGGGACTGACTTATCTGCTAATCAGATACATTCCCAAAAAGCCCAGCATTACTGTGGAGCAGCTATGGAGCAGACTTCTCACCCTTGTCTGGTTCCAAAAATATTTCATTGTAGGAAAATGGAAGGTCATTTCATGGTGTCTGCACATGACTCGGGATCATTGAACTGAGAATCCAGCAAATGGAAGTGGAAAGAAGcttatatatGTCATGATTTCTTACTCAAAAGTATAGGTCTAAAGTCTAGTGTCTTCACCTTCCTGCTCATGAAGCCATATATAATTGGGTTATAAGCTGTGCTGGACTTGGCGAAGACTGAGGGGATGATGGCAACAGTGGGCGAGACGACACTCTGCTTGCCAAAAGCTACCAGCATGGAGACCACGGCATAGGGTGTCCAGCACAGCAGATAACAGAAAATCATCAACAGGAACATGGTGGCCAACTTCTTCTCATAGCGTAGGACCTTAATGATTTGCAATGTCTGCAGATCCTCAATGGAGCGCAACTACAGTAATAaatggagagaaaggga
>XR_004577889.1
GTCCTTCATGTGTTTACACATCAGTTCATCTACCTGAACAAACAAAACTCACAGGGAGCTGgcatttttcttaaattttttttcttacttactATTATTGGTTTGCTTGAAAAGGTTGTGGATATCTACTGACACAGTGAGTTCTTTTCTGAGATAAAGTTAATCTGTACCAACATGGACCACTCAAGTGAGAAGAATAAATCAGCCACCAAGAAAAAAGTAGCTGTAGTAGGAGGCGGCTTGGTTGGTGGCTTAAATGCATGCTTCTTTGCAAAAAGAGGATTTGAGGTTGCAGTCTTTGAATCTCGAGAAGATATTCGCCGTGCCAAAACAGTAAAGGGCAGGAGCATAAATCTAGCCCTCTCCCATAGGGGACGCCAAGCTTTAAAACATGTTGGAATGGAAGACAAGATTGTTTCCAAGGCCATCCCAATGCATGCTCGTATGATCCACAGTGTGAATGGAAAACGTTCTCCCATACCATATGGAAAGAAAGGTCAGTACATCCTTTCTGTAGGCAGAGCCAACCTCAATAAAGAGCTGCTAACAGCGTCTGAAGCATATCCAAACACACAATTGAACTTTAACCATAAACTGCTTGACTGGAATCCAGAAACAGGGACCATGACCTTTCTTGGGCCTGATGGTAATGAAAAGGAGATCCAGGCAGATCTCATAGTGGGCTGCGACGGTGCCTTCTCTGCCACTAGGAAGCAGTTTTTACGCCGCAGTCGCTTTAATTACAGCCAGACCTACATCCCCCATGGATACCTTGAGCTCACTATGCCTCCAAAAAATGGTGATTTTGCAATGGAGCCCAATTTTCTTCATATCTGGCCCAGGAACACATTTATGATGATTGCTCTCCCGAACATGGACAAGACCTTCACCTGTACACTCTTCATGCCATTTGAGGAATTTGAGAAGATTACCACAGGCGATGAGCTGATGAACTTCTTTCAGAAATACTTCCCAGATTCCATCCCACTCTTAGGAGTtgaagCTCTAAAGAGGGACTTTTTCCAACTGCCTGCCCAGGCCATGGTGTCAGTGAAGTGCTCTCCGTATCATCTGAACGACAAATGTGTCTTAATGGGGgatgctgctcatgctgtggtGCCATTTTATGGCCAGGGCATGAATGCAGGCTTTGAGGACTGCCTCGTTTTTGATGAGATTATGGATCAGTTTAATGAAGAATTCTCTGCTGTTCTCCCGGAGTTCACACGAATTCGTGTACCTGATGATCACGCCATAGCTGATTTGGCTATGTACAATTATATagagATGCGAGCGCATGTGAACTCCAAGTACTTTCTGTTCCGTAAATATCTGGACAATGCACTCCATTATATCATGCCGAGAACAATAATCCCATTGTACACAATGGTCACTTTTACCCGAACACGCTATCATGAAGCAGTGATCCGCTGGCAATGGCAGAACAAGGTGATTACTCGGGGCCTGTTGCTTTGGGGGACATTGTCTGTAGTGGGACTGACTTATCTGCTAATCAGATACATTCCCAAAAAGCCCAGCATTACTGTGGAGCAGCTATGGAGCAGACTTCTCACCCTTGTCTGGTTCCAAAAATATTTCATTGTAGGAAAATGGAAGGTCATTTCATGGTGTCTGCACATGACTCGGGATCATTGAACTGAGAATCCAGCAAATGGAAGTGGAAAGAAGcttatatatGCCTGTCATCACGGCTCTGTGACATCACGATGGGACGTACTGGTTGGCTGGAGCAGGTCAGGGGGTGGTCCTTAATGCCACACTGCAGGTCATGATTTCTTACTCAAAAGTATAGGTCTAAAGTCTAGTGTCTTCACCTTCCTGCTCATGAAGCCATATATAATTGGGTTATAAGCTGTGCTGGACTTGGCGAAGACTGAGGGGATGATGGCAACAGTGGGCGAGACGACACTCTGCTTGCCAAAAGCTACCAGCATGGAGACCACGGCATAGGGTGTCCAGCACAGCAGATAACAGAAAATCATCAACAGGAACATGGTGGCCAACTTCTTCTCATAGCGTAGGACCTTAATGATTTGCAATGTCTGCAGATCCTCAATGGAGCGCAACTACAGTAATAaatggagagaaaggga

Function

symbol description
kmo Predicted to enable NAD(P)H oxidase H2O2-forming activity; flavin adenine dinucleotide binding activity; and kynurenine 3-monooxygenase activity. Acts upstream of or within glomerular visceral epithelial cell development and response to yeast. Predicted to be located in membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be active in mitochondrial outer membrane. Is expressed in liver; pronephric duct; and pronephros. Human ortholog(s) of this gene implicated in schizophrenia. Orthologous to human KMO (kynurenine 3-monooxygenase).

NR:

description
PREDICTED: kynurenine 3-monooxygenase isoform X1

GO:

id name namespace
GO:0019805 quinolinate biosynthetic process biological_process
GO:0001878 response to yeast biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0009435 NAD biosynthetic process biological_process
GO:0006569 tryptophan catabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0004502 kynurenine 3-monooxygenase activity molecular_function

KEGG:

id description
K00486 KMO; kynurenine 3-monooxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026942473.2 True 2307 mRNA 0.44 17 10594574 10608704
XM_034303118.1 False 2026 mRNA 0.44 17 10594574 10608704
XR_004577889.1 False 2114 misc_RNA 0.45 18 10594574 10608704

Neighbor

gene id symbol gene type direction distance location
dna2 dna2,LOC107743557,LOC108261390 coding upstream 6459 10573152 ~ 10588115 (+)
si:dkey-191g9.7 LOC108263628 coding upstream 44383 10542610 ~ 10550191 (+)
si:dkey-191g9.5 LOC108263627,LOC108438182,LOC106606775,LOC107565930,LOC107666514,LOC107713893,LOC107743575 coding upstream 54534 10528377 ~ 10540040 (+)
mmrn2a NA coding upstream 559184 10016483 ~ 10035390 (+)
glud1a glud1,glud1a,LOC107563055,LOC107743560,LOC108438199,LOC103026661,LOC107725450,LOC107601820 coding upstream 600184 9976131 ~ 9994390 (+)
LOC113542239 rmdn2,LOC107747293,LOC107665610 coding downstream 75796 10684500 ~ 10723757 (+)
nanp nanp coding downstream 174402 10783106 ~ 10785648 (+)
LOC113538283 abhd12 coding downstream 193463 10802167 ~ 10816200 (+)
LOC113537521 abhd12 coding downstream 208138 10816842 ~ 10824656 (+)
tm9sf3 tm9sf3,tm9s3 coding downstream 216518 10825222 ~ 10844291 (+)
G44044 NA non-coding upstream 34051 10558629 ~ 10560523 (+)
G44016 NA non-coding upstream 77688 10514337 ~ 10516886 (+)
LOC117596582 NA non-coding upstream 271310 10318421 ~ 10323264 (+)
G43905 synpo2l non-coding upstream 347539 10242057 ~ 10247035 (+)
LOC117596896 NA non-coding upstream 430618 10161499 ~ 10163956 (+)
G44059 opn3,LOC106939390,LOC107676370,LOC106911851,LOC103148276,LOC107549142,LOC107665579 non-coding downstream 2775 10611479 ~ 10611806 (+)
G44060 opn3 non-coding downstream 6442 10615146 ~ 10615586 (+)
G44182 NA non-coding downstream 366138 10974842 ~ 10978237 (+)
G44211 NA non-coding downstream 394456 11003160 ~ 11004990 (+)
G44222 NA non-coding downstream 444871 11053575 ~ 11053853 (+)
sprn sprn other upstream 36279 10552259 ~ 10558295 (+)
trnak-cuu NA other upstream 2124693 8469624 ~ 8469881 (+)
G42685 NA other upstream 2128262 8465747 ~ 8466312 (+)
naa15b naa15b,LOC108263533,LOC108434806,LOC107712022,LOC107671368,LOC107737080 other upstream 2923164 7649198 ~ 7671410 (+)
scoca scoca,scoc,LOC108263532,LOC107737083,LOC107674238,LOC103034491,LOC107556533,LOC107671340 other upstream 2964434 7620545 ~ 7630140 (+)
dntt dntt other downstream 490889 11099593 ~ 11207862 (+)
LOC113545306 cfap46 other downstream 1074160 11682864 ~ 11745224 (+)
trnag-gcc NA other downstream 1098231 11706935 ~ 11707005 (+)
LOC113544122 NA other downstream 1137044 11745748 ~ 11766414 (+)
trnay-gua NA other downstream 2027616 12636320 ~ 12636406 (+)

Expression


Co-expression Network