map3k21 (LOC108263591,LOC108434955,LOC107676554)


Basic Information

Item Value
gene id map3k21
gene name LOC108263591,LOC108434955,LOC107676554
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 9382638 ~ 9408518 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026942835.2
gcctctgagtgtgtgtggctggcGTGTCGGTAGGGTGAGTGGCGGAGGCAGGCTGACGCCATGGCGCTGTTCCGCCGAGTTTCTCCGCCAAGTTACTGGACTTCTGGGACTCTCTGCACTTAAACTACTCGCTTTTACTCGAATTTTGGAGCTTCGGATTTTCACTTGAGCCCCGGTGTTTTTATTGTGAGACGGAACACAAAGTTTGTGCTGTGTtttcagacgtgtgtgtgtgtatgtgtgtgtgaagtggagTCAGGTGAACTCAGCGGCTGTATTAGTAAACTTGGTAAAGAGCTACGTTTAGCTTACTCTGCTAGCTTACTCTGTCGAACAGACGACACGATGCGTAAAAGTGGGAAACTCAGAGGTAGTAAAGACGTgttgtctttttaatttgtgttaaacacatgtgtatgtgtgtgtgtgtgtgctcggtTTGTGTGGTTTATTCCGCTGGAGTGGGCAGGTAGGAGATACTTTGCACCTGTTAAGTTAAGCTCGTTGCTAACGTTAGCAAGCTAATAACTCAGCAGTGGCCTTTACAGACCGGGTCTTCTGTCTGTTCAGCTTTAGAGAAAGTTAACTAAACTTAAAGAAAGTTTAGTTTAGGTTTAATAAATGACTGAGTTGTGTGTTTAACAGCGGAAGTTGAGTGTGTAACATTATCTCGGCTGAGGTTTGGGACGCTACAGTGTCAGGTTGGTGTAGCTGGTTTATGTGGACAGCAGGCAGCTCACACTGAAGCCCTGAACGGATCAGACGCAGACTCGCGCACTGAGTAATGAGGCGCGCGCCGGCTGTCCCGGTGCTTATTGCATGTCTGGAGACGTAACGCAACCCCGGTTTACGTTCATTTTCCGCTCGGACATCAGCGCACCTTATGGTGCCGCCGCAGGCGCCGAGTCATGGATGTTCCCCGGGCCGTTTTCCCGAACGGTGAGGGGCGACTAACGGAGCATGGCTGGCCGGAGAGctccacttcctcctcctcctccgcagcagcagcagcagccaccGCCGCCGCCGGGACATGTCGCGCGCACTCGGCGCCGGCGCGCACGCGCTCGCTGTGGACTGCGGCGTACGACTACGAGGCGAGCGGCGAGGACGAGCTCAGCCTGCGGCGCGGTGACGTGGTCGAGGTGCTGTCCAAAGACGCCGCCGTGTCGGGCGATGAAGGCTGGTGGACCGGCAAGCTCAACCACCGCGTGGGCATTTTCCCGTCCAACTACGTCACCTACAGACCAGCGGCGGTGtcctcaccatcaccatcagcaGCGGCATCGCCAGATCCCTTGAACATCCCGTTCAGCGCGCTCGTGCTCGAGGAGATCATCGGCGTCGGCGGCTTCGGCAAAGTGTACCGCGGCACATGGCGCGAGCAGGAGGTGGCCGTGAAGGCGGCGCGCCAGGACCCGGACGAGGACATCACCGCCACCGCGGAGAGCGTCAAGCAGGAGGCCAAGCTGTTCGCCATGCTGCGCCACCCCAACATCATCCGGCTCGAGGGCGTGTGTCTGGAGGAGCCCAACCTGTGCCTGGTGATGGAGTACGCGCAAGGAGGCACGCTGAACCGCGCGCTCACCGGCAGACGCATCCCGCCACACATCCTGGTCAACTGGGCCGTGCAGATAGCCAAGGGCATGCAGTACCTGCACGAGGAGGCCGCCGTTCCCATCATCCACCGCGATCTGAAGTCCAGCAACAtTTTAATACTTGAAAGAATTGAGAACAATGACATTGGTAGGAAGACACTGAAGATCACTGACTTTGGCCTGGCTAGAGAGTGGCACAAGACTACTAAAATGAGTGCTGCTGGCACGTACTCGTGGATGGCTCCTGAGGTCATTAAATCCTCCCTCTTCTCCAAAGGCAGTGACGTATGGAGTTATGGGGTGCTTCTCTGGGAGCTGCTGACAGGAGAGGTACCTTACCGTGGTATCGATGGGTTGGCAGTTGCCTATGGAGTGGCTGTCAACAAGTTAACCCTCCCCATTCCATCCACCTGCCCTGAGCCTTTTGCCAAGCTCATGGAAGAATGCTGGGAGCAGGATCCCCACATCCGACCGATGTTCGCCACCATCCTGGAGCAGTTGACAGCTATAGAGGAGGCTGTGATGGCCACCATGCCGCAGGACTCCTTCCACTCCATGCAGGAGGACTGGAGGGTGGAGATCCAGGAGATGTTTGATGAGCTGCGAACAAAAGAGAAGGAGCTGCGCTCTCGTGAGGAGGAGCTGATGCGGGCGACCCTGCAACAGAAATCGCATGAGGAACTACTGAAGAGGAGAGAGCAACAGCTggctgagagagagatcaaTGTGCTGGAGCGTGAGCTCAACATCCTCATCTTCCAGCTGAACAAGGACAAGCCCAACGTCAAGAAGAGGAAGGGCAAGTTTAAGCGCAGTCGCCTCAAGCTGAAGGATGGCAACCGCATCAGCTTGCCCTCAGaTTTTCAGCATAAGATCACAGTGCAGGCCTCGCCATCgatggagaagaggaggagCCTGAACAGCACCAGTTCCAGCCCTCCCAGCAGCCCCACTCTCATCCCCCGTCTCCGGGCCATCCAGCTGAGCTGTTCCAGTGACTCTACACAAAGGaacagtatatatgtgtatcACCAAGATGTGGATATCACGAACGAGTGTAAACCTCGTACAGGGAGGAAAGTAACTCTGGACGAGAGCAACAGGACGTGGGGCAGGAGCACCATCTATAAGCCTGAGGAGTTTGAGGATGCGAAGAAGGGCATAAAGAAGAAGGTTCGCACATGGGGTCCGAGCTCCATTCAGACCAAGGAGAGAGGAAACAGTGCTGAAAGGGTTCGGCCGCTCTCGGATGGAAACAATCCTTGGTCTACAACTCTGCTGAAATCCCAGAAATCTGTTCCACTGGCTGCATTATTTGCCGAGCAGGGGACGGCTAAAGATGAAACAAGCTCTCTCGAAGGTTCAGACAGCAAACCAAAGCAACTCAAGTTCCCCAATCAGGTCTATATTGATCTACCTCTGTGGAAGGACGAGCAGAGCGAGGGGCCTGGGGTCGGTGTAGGGGGCGGGACAGAGAGCCAGGAGGAGCCAGCCACATCCACCAGCTCAACAAGCACAACGCCGCAGCACACACCCACCAACAGTCTGAAGCGCAGCGGTGGGCGGCGGCGCACAGACACTGTGCTGTACGGCTGCGCCTCGCTCCTAGCTGCTGTGGCTCTGGGCCTGGACCTGCGTGATGCCCACAAGGCCACACCCACTGATGAGATGGAGCCTCGAGAAGACAGGAAGAAGCGAGAAGGCCTGTTTCAGCGCGCCACACGTTTCCGGCGCAGTTCCAGCCCACGCAGGGACGACAACCTGCTGGCCATGTCTTCTATCTCAGAGTGCAACTCCACCAAGTGTCTCCTCCATTCGGACTCTGAGGGTCTTGAGCACAGCCCTGTAACTGAGGCACCACTTAATGGCTCTGGATTCTGCAATATCAGCCAGTGCGGCAGAAATGTGGGCAGGACTGATCATCTGTGCCCACCGTTGGTACCAGAGCATGGCACCACCTCTGGGTCCCGGCTCAGGAGGAAGAAATCCAGTCCTGCTGTCTGTCAGAATGcaGCTGGCACCAACTGTTCTGTGTCTAGAGCTGCTGCAGATGTCCCTGTAGTCTCGTCCTCCCAGAAAAAGAAACCGGACAGAGAAAGCAGCCAGGAAAAGCAGACTGCTTCAGACTCTGTCTCCAGGCCCAGGCCGTTGTCTCTGAGAGCCAAACCTCACTGCTGGGGTCTTCTGAGGAGCCGAAACAAGAGCTACTCTCTAGGTCACTGCTCTGGAGAGAAGAGTGCACAGAGCCTGGGCATAGTGCTGTCCTCCGAGGTCAAAATGGGCTGCTCTCTCTTAGACGTGGACACCGAGGGACAGAAACGCGATTGCACCGTTCCCCTTTGCCGAATCCAGAGCACACCAAGTCGCCTGTCTGTCTTTGAACTGGAAAAAGAGTTCTTTTCCTGAAATGAGCtgcctctcctctcctctcctctcctcttagAGCACAACCCAACCTTCTGACTTCAATCCAGTTACAGTTATATGACGAAAGATTCTTCTGTGTTCAGGACTCACAAAACATTGTGGCGTTTGTGCCCAATTTTAAGATTTTGCTGCTGGAGTTgtcatgttgtactttttttatttatattcacttTATTTTGATAAGTAATTTAATATGAAAGGACATATGAGCAAAATGATCAGCATTCCGTTTTACTGAAGAATGGCCAGTGCGTAGCGCATtccatatatgtgtatatatacatatacatacatacataaaagaTGTCGGTATACTACTGTACTTCAAGATTTTGtagatttatatttgtattagaAACAAAGTTGTTTATTCAACCTGGATAATCCTGGATATTAGAGGTTATTCTGAACTTATAGTGAATGAAAatgggttgtttttttgtttttttttttttttttttttttttttttttatatgctacTGCAGGTTTTTGCCCCCTGGTTGATCAGAATGTAGAGGGATTCTGCTGTATGGTGCAGACGTGAACTTACAGCAAATCAGACGTATTTATGGAAAATACGTTAGTTCCCTGAGGAAGTTAGATGGGTCATGTGACGTAGTGACTTCCCCTGTATTGCTTGCTCAGTATCTGCTTTTCTTTAAtgaatttgccaacaataagATTTTCCGTGCTCTCTGTAATATTTACTCGTTTTAACCCCGAGTAAAATGGTGCAGTCAGTATTACATTCTCAGTGAGACAGTGGTCTCACTGTCTTTGGGTTCCCACGCCACGGAGTTGGCTGTTGTTTGCTTGTTGCTATTGTTCCCAGGTGACCTTTCCTTTTTCACCACACCTGTGAAACGGGTACAGAGTATTGTCTGTCATATTGAGATTGTGTGTCTCCCCTGCTTGCTATAGAGCTCTTTGTGCTTTTAATGTGTCTGGTTAAACTGATTTCTCGAAGTTTACAAGCTATAGCTGCACTGTGGTTTCAGACTTTTCATATGATGAACACAGAAAGCCCTCGTTATTCAGTTAAATATCCAACATGAGGAAGGGATTAATCAGCTTATAAAATACAGACTGACATTCCTCTGAAGATAGTCTGTGAGGTTAGAAtgtatttgttttgcttttgcttttgcttttgctttatCTGAACAACTCAATTGGGAATGCCAAACAGAGGTGATGAAGTATGTGCAATGCATTTTCCATTCAAACACATTAGTTTTCACTGAAAGTGTGAAAATCTGTTTTACTGTATTACCTGAAAAGCAGGTAATGAATTCAGTAACAGAATGGCAGTGATTACCTGCCCTGTGCCAACAGTTCTTGGTTTTTAAATTAAGCATCTTGATTACAGCTCTGATGTTGTTTTATGTATCATGTTAGTGGACCAAAATATAATCTGAATTTGATTAGCTTATTCCTTGACTTAAAATGGACTGTTTTGATGCATTCCTTCAACatagtttaatattaaatgttcttttttcttttcttattccTTACAACTATTAGCTTCTCTCATTTGTCTCACCTGGCTATTAAATTGAAAGGTTTTTTTGAATTGCAATCTAAGCATCTATTCGCTAGTAAAGAGCTCCATTTTAGCTCATTAAGTGTACTCAGAGCTGGCACACACTGATCCGCTCTTAAGTAGGTTCTAGCTCAAAGCTCAGTGAAACTAAGCAACAGGGTATAATCTGAATCCTTTCCACAATGTTTGTTTCCTTgtaatactgtgcaaaagtgttACCACGGTCATCAGACCTTAAGCTTGTTTAGAAAAGgagttaaatgtttttgtttttttgtaaacttcCTTTATGTGTATTAGAGAATATTAAACAACTGGCTCTGCTGAGAGGAAGCAGTTTTGTAATGACTCCCAAAACATTCAGGTAAAAACAAGCAAATTGATTTTATAGATTTTGTACCATCTGCTTAAACTGTGTATGTACATTCATAAGCAACATTCAGTCAAAAGTGTAGGTGTAATTGAGCTTTGGGTTAAAACGAGGtgttttaacttttaataaGTGGGAATAAATTTCATTCTGTGAAATCACCTCACACGTTTGCAAGGGTTTATTATCCATGAAGGCAACTGTCCCTTGTGATTTGGAGCATCTGTTATAACATGCCCTGTGATCATCTCATAAGAGCTTCTTATGTAGCACTGCAATTTTGAAATAGTGATTGTTGATCCTGAACTGCTGATttacaagatttttttaaaatgtgaaattaatgtGGTGATGTCTCTTACAGGACACCAGTGAGGCTGGAACTGCAGTTGCACGTTTTGATTGCATGAgaacaaaacactgaaatgtgtgaTTCGGgatactgtaattatttttactaaAATGAAGTAGTAGCGTGTCTGTTGGAAAAGTAccagatatatatttttttcaagcaGTCATGACTACAGATTTGAATAAAAACTGCACATGGACACTAAAAGACACTAAATGATATTTTCTACTGGATGAACTTCTCACCAAAGTTGCCCTTTCTTTCCAGCAGTTTGGTTTctgaaagtattttttaaaaagcaatattTGTTACATGGatcacatgtactgtatatacataatgATTATGATGACTTCCGCAATTATTTTAGTGTCTGTTTGAGCCACATGACCAAATCAACGTTGAGGTGGTTTGCTGGTGCTGTTTTAGATCACAGTGCCAGTGagtgttggaaagggttcatcCTGGAATCACTGCTGTACTCAAGTGACCAATAAATCCTTTATTCCTCAA

Function

NR:

description
mitogen-activated protein kinase kinase kinase 21-like isoform X1

GO: NA

KEGG:

id description
K17534 MLK4, KIAA1804; mitogen-activated protein kinase kinase kinase MLK4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026942835.2 True 6811 mRNA 0.48 12 9382638 9408518

Neighbor

gene id symbol gene type direction distance location
rgs17 rgs17,LOC108262465,LOC108434957,LOC107552952,LOC107725462,LOC107743539,LOC107666476 coding upstream 44022 9316791 ~ 9338616 (+)
phactr2 phactr2,LOC107601847,LOC107552951,LOC107666519,LOC107676579 coding upstream 171345 9152330 ~ 9211293 (+)
cog2 cog2,LOC107601846,LOC107666500,LOC107725477,LOC107743537,LOC107552949 coding upstream 239608 9129979 ~ 9143030 (+)
galnt2 galnt2,LOC107676591,LOC107725470,LOC107666462,LOC107743534 coding upstream 286955 9001659 ~ 9095683 (+)
si:ch73-109d9.1 LOC108262808,LOC107556808,LOC107556784 coding upstream 400765 8968989 ~ 8981873 (+)
prim2 prim2,LOC108263846,LOC108443732,LOC107676604,LOC107666539 coding downstream 12548 9421066 ~ 9487539 (+)
si:dkey-103j14.5 LOC108263510,LOC108443735 coding downstream 235291 9643809 ~ 9666593 (+)
kifbp kif1bp,LOC107676599,LOC107743600 coding downstream 331272 9739790 ~ 9745528 (+)
vps26a vps26a,LOC107666532,LOC107676600 coding downstream 355115 9763633 ~ 9772357 (+)
supv3l1 supv3l1,LOC107725491,LOC107743553,LOC107676608,LOC107666535,LOC107601833,LOC107563062 coding downstream 365414 9773932 ~ 9783035 (+)
G43186 NA non-coding upstream 35402 9344055 ~ 9347236 (+)
G43137 NA non-coding upstream 158045 9224363 ~ 9224593 (+)
G42848 NA non-coding upstream 367597 9012486 ~ 9015041 (+)
G42833 NA non-coding upstream 428612 8953522 ~ 8954026 (+)
G42792 NA non-coding upstream 511712 8812836 ~ 8870926 (+)
G43330 NA non-coding downstream 80241 9488759 ~ 9488959 (+)
G43337 NA non-coding downstream 86459 9494977 ~ 9495210 (+)
G43360 NA non-coding downstream 118343 9526861 ~ 9527159 (+)
G43422 NA non-coding downstream 260093 9668611 ~ 9671740 (+)
G43615 NA non-coding downstream 463028 9871546 ~ 9871819 (+)
trnak-cuu NA other upstream 912757 8469624 ~ 8469881 (+)
G42685 NA other upstream 916326 8465747 ~ 8466312 (+)
naa15b naa15b,LOC108263533,LOC108434806,LOC107712022,LOC107671368,LOC107737080 other upstream 1711228 7649198 ~ 7671410 (+)
scoca scoca,scoc,LOC108263532,LOC107737083,LOC107674238,LOC103034491,LOC107556533,LOC107671340 other upstream 1752498 7620545 ~ 7630140 (+)
G42075 NA other upstream 2161615 7203950 ~ 7221023 (+)
sprn sprn other downstream 1143741 10552259 ~ 10558295 (+)
LOC113543929 kmo,LOC101885014,LOC107549141,LOC107665616 other downstream 1186056 10594574 ~ 10608704 (+)
dntt dntt other downstream 1691075 11099593 ~ 11207862 (+)
LOC113545306 cfap46 other downstream 2274346 11682864 ~ 11745224 (+)
trnag-gcc NA other downstream 2298417 11706935 ~ 11707005 (+)

Expression


Co-expression Network