haao (haao,LOC107727361,LOC107699283,LOC107586504,LOC107590002,LOC107707146)


Basic Information

Item Value
gene id haao
gene name haao,LOC107727361,LOC107699283,LOC107586504,LOC107590002,LOC107707146
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 21899556 ~ 21905109 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026945610.2
ACACGTGTGGTCTGTGCTCCTTCACGCCCCCTTTATCTCTGCCAACAAGTACAAAGTTAATGGGTGAAGAGAAAATACACAGCATGATATAAGTGCTCAAGATTGCTGCTGCATAGATTGCTGCTATAGCCTAAATCaataagaaaaatgacaaacgAGTCTCTTCATGTCAACATAGACAAGTGGATTAAGGAGAATGAGGCTTCTTTCTTACCACCTGTCTGCAACAAATTAATGTTCTTCTATCAGTTAAATATCATGTATGTTGGTGGTCCAAACATAAGGAAGGATTACCACATAGAGGAGGGTGAAGAGCTGTTTTACCAGATCCGGGGAGACATGGTCTTGAAAGTGATAGAGAATGGAAAACACAAAGATGTGCATATCCGTGAAGGAGAGatgTTTTTGCTGCCAGCACGAATCCCCCACTCTCCTCAGAGGCAGGCCAACACAGTGGGACTAGTGGTGGAGAGGAAAAGACTGCGCTCGGAAACAGACTGTCTCCGATACTATGTGGATAACAGCACAGACATCCTGTTTGAGCGCTGGTTTTACTGTGAGAACCTGGGAACTCAGCTAGTTCCAGTTATTCAGGAGTTTATGGCATCGAAGCAGCATAAGACTGGAAAACCTGACCCAGATGAACCTATCAAGCCGCCACCTTACCCCCTCAACACAATGAATGTGATGACCCCGTTCTCCTTCAAAGACTGGGTAGAGAAGCAGAAGCCTGCTCTGGTCAGCGGACGACCTCTGGACATGTTTGGGAATCAATTTGAGACTGAGgttatgTTGTATGGTCCTGGAGAATCAGAGACATTCAAAAGAACCTCCGATGGATGGATCTGGCAGCTAGAGGGATCCTCAAGTGTCTCTATGAATGGCCAAGACTATAATCTCTCCGTAGGAGACTGTCTTTTGGTACTTGGATTGACAGAGTATCACTGGCAGAGGGCTGAGAATTGTGTTGCCTTGTACGTTGTTCAAAATCCAGAGAGGAAGAGGCCTTTCTAAGTAGtggcagaaaaatatttgtttgtgaTCTGCCTTAAGATTAAGTCCTTCTATAAAGGTCCTGTGGTTTATACAGTAGACAACTGTACAAttacaagaaaaatatattgcatttta

Function

symbol description
haao Predicted to enable 3-hydroxyanthranilate 3,4-dioxygenase activity and ferrous iron binding activity. Predicted to be involved in 'de novo' NAD biosynthetic process from tryptophan and quinolinate biosynthetic process. Predicted to act upstream of or within pyridine nucleotide biosynthetic process. Predicted to be located in cytosol. Predicted to be active in cytoplasm. Is expressed in intestinal bulb and liver. Orthologous to human HAAO (3-hydroxyanthranilate 3,4-dioxygenase).

NR:

description
3-hydroxyanthranilate 3,4-dioxygenase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0009435 NAD biosynthetic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0000334 3-hydroxyanthranilate 3,4-dioxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function

KEGG:

id description
K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026945610.2 True 1131 mRNA 0.44 10 21899556 21905109

Neighbor

gene id symbol gene type direction distance location
LOC113542474 zfp36l2 coding upstream 163023 21733757 ~ 21736533 (+)
thada thada,LOC104958480 coding upstream 167692 21645736 ~ 21731864 (+)
epcam NA coding upstream 290414 21606385 ~ 21609142 (+)
ttc7a ttc7a,LOC107586483,LOC107699274 coding upstream 339457 21531271 ~ 21560099 (+)
prop1 LOC108263276 coding upstream 377021 21517786 ~ 21522535 (+)
hcar1-3 NA coding downstream 9440 21914549 ~ 21917668 (+)
LOC113537982 kcng3,LOC107758134,LOC107756869,LOC107590001,LOC107586474 coding downstream 49796 21954905 ~ 21960399 (+)
LOC113537563 LOC108263692,LOC108422693 coding downstream 62632 21967741 ~ 21970960 (+)
prph2b LOC108262942,LOC108422795,LOC103028857,LOC107578331,LOC107739477,LOC107586467,LOC107590000 coding downstream 339000 22244109 ~ 22265419 (+)
timm23b timm23a,LOC108263229,LOC107565600,LOC107690962,LOC108426535,LOC107561858 coding downstream 666262 22571371 ~ 22587644 (+)
G50783 NA non-coding upstream 24541 21874813 ~ 21875015 (+)
G50772 NA non-coding upstream 30528 21868824 ~ 21869028 (+)
G50516 NA non-coding upstream 325503 21567415 ~ 21574053 (+)
LOC117596875 NA non-coding upstream 373489 21525437 ~ 21526067 (+)
G50528 NA non-coding upstream 381801 21516282 ~ 21517755 (+)
LOC113545609 NA non-coding downstream 99609 22004718 ~ 22015489 (+)
G50880 eml4 non-coding downstream 130373 22035482 ~ 22041152 (+)
LOC113544795 NA non-coding downstream 322336 22227445 ~ 22229448 (+)
G50936 NA non-coding downstream 346726 22251835 ~ 22252048 (+)
G50929 NA non-coding downstream 361588 22266697 ~ 22337044 (+)
camkmt camkmt,si:ch73-54n14.2,LOC107602502,LOC107666367,LOC107711417 other upstream 780592 21025733 ~ 21118964 (+)
G49862 NA other upstream 1324077 20574973 ~ 20575479 (+)
pprc1 LOC108263826,LOC108421584 other upstream 1506955 20382346 ~ 20392601 (+)
sfxn5a sfxn5,sfxn5a,LOC108262907,LOC107567846,LOC107733701,LOC107690191 other upstream 2543458 19341350 ~ 19356098 (+)
LOC113539574 htra2,LOC108263241,LOC108441752,LOC107582530,LOC107690150,LOC107733689,LOC105899646,LOC106589831 other upstream 2637468 19256064 ~ 19262088 (+)
wu:fj16a03 NA other downstream 115213 22020322 ~ 22023811 (+)
LOC113538739 qki,LOC107696379,LOC107559772,LOC106605787,LOC107739475 other downstream 580201 22485310 ~ 22552752 (+)
G51271 znf318 other downstream 879219 22784328 ~ 22786505 (+)
LOC113540861 LOC108263311 other downstream 1006035 22911144 ~ 22913552 (+)
G51562 NA other downstream 1549319 23454428 ~ 23455549 (+)

Expression


Co-expression Network