Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117596838 |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 26803195 ~ 26809508 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_034302700.1 | True | 774 | mRNA | 0.50 | 5 | 26803195 | 26809508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrrc1 | lrrc1 | coding | upstream | 4683 | 26755660 ~ 26798512 (+) |
| eloal | LOC108263752 | coding | upstream | 67189 | 26727249 ~ 26736006 (+) |
| fbxo9 | fbxo9,LOC107712342,LOC107751337 | coding | upstream | 118687 | 26670892 ~ 26684508 (+) |
| LOC113542124 | LOC108263832 | coding | upstream | 167982 | 26631565 ~ 26635213 (+) |
| fgfr2 | fgfr2 | coding | upstream | 514293 | 26250139 ~ 26288902 (+) |
| mlip | mlip | coding | downstream | 20716 | 26830224 ~ 26865137 (+) |
| fam83b | fam83b | coding | downstream | 63720 | 26873228 ~ 26887079 (+) |
| hcrtr2 | hcrtr2 | coding | downstream | 95989 | 26905497 ~ 26923251 (+) |
| gfral | gfral | coding | downstream | 115726 | 26925234 ~ 26933750 (+) |
| bag2 | bag2 | coding | downstream | 397820 | 27207328 ~ 27213122 (+) |
| G53172 | NA | non-coding | upstream | 3677 | 26798698 ~ 26799518 (+) |
| G53092 | NA | non-coding | upstream | 250043 | 26552936 ~ 26553152 (+) |
| G53091 | NA | non-coding | upstream | 250473 | 26552518 ~ 26552722 (+) |
| G53090 | NA | non-coding | upstream | 250910 | 26552075 ~ 26552285 (+) |
| G53083 | NA | non-coding | upstream | 264675 | 26538234 ~ 26538520 (+) |
| G53280 | NA | non-coding | downstream | 124430 | 26933938 ~ 26934265 (+) |
| G53363 | LOC108263596 | non-coding | downstream | 208453 | 27017961 ~ 27018846 (+) |
| G53316 | NA | non-coding | downstream | 224341 | 27033849 ~ 27036808 (+) |
| LOC113542178 | NA | non-coding | downstream | 246256 | 27055764 ~ 27056998 (+) |
| LOC117596898 | NA | non-coding | downstream | 249370 | 27058878 ~ 27068180 (+) |
| bcl2l11 | bcl2l11 | other | upstream | 938849 | 25850600 ~ 25864346 (+) |
| acoxl | acoxl | other | upstream | 956292 | 25801972 ~ 25846903 (+) |
| golga4 | golga4 | other | upstream | 1208259 | 25562402 ~ 25594936 (+) |
| b3galnt2 | b3galnt2 | other | upstream | 2400741 | 24350184 ~ 24402454 (+) |
| LOC113540163 | NA | other | upstream | 2745297 | 24055154 ~ 24057898 (+) |
| G53328 | NA | other | downstream | 176470 | 26985978 ~ 26992711 (+) |
| znf451 | znf451 | other | downstream | 388401 | 27197909 ~ 27207245 (+) |
| pde10a | pde10a | other | downstream | 1391527 | 28201035 ~ 28301823 (+) |
| G53692 | NA | other | downstream | 1637869 | 28447377 ~ 28448311 (+) |
| LOC113542011 | glyat,LOC108263175,LOC108263176 | other | downstream | 1656580 | 28466088 ~ 28496606 (+) |
