XLOC_005327 (SLC16A6)


Basic Information

Item Value
gene id XLOC_005327
gene name SLC16A6
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 20575640 ~ 20584439 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010220
GAGGAGCTCAATGTCGAGACACCACATGAACTCCTGGCAGTGAACAGACCCCAGCACAGCCCTGGAGCTCCAGTAAAGCCCTCACTCAGGAGCAGGTCGCAGGTGAAAATGGCACAGTGGATTTTCCGACTGAGAAGTTGCTTTGGCTCTAAAGTTTATTCCGAGGTCCCAGATGGTGGTTGGggttGGATTGTGGCTGTGGCGTTTTTCCTGGTGGAGGTGTTCACTTATGGGGTTATCAAAAGTTTTGGAATCTTCCTTAAGGACCTAATGAGTGACTTTAATGAAACAAACAGCCGAGTATCATGGATCATTTCAATATGTGTCTTTGTTATGACTTTCACAGCTCCTCTATCAACCGTGCTGAGTAATCGATTTGGCTTCCAGCCTGTTGTGATGTTTGGAGGGTTTCTCATATCTCTGGGCACAATCTCAACAGCATTCACCAGCTCTATCAATCAGATGTACCTTACTATTGGGATTGTGACTGGACTGGGTTATTGTTTGACATTTCTACCAACCGTCACAATCTTGTCCCAGTACTTCAGCAGGCGTCGTTCTGTGGTCACAGCCATGGCATCCACTGGAGAGTCATTTGCTATATTTGCTTTTGCTCCAGCATTCACAGCTCTTAAGAACTACATCGGCTGGAGGTACACATTTGTGGTGATTGGGACGTTACAGGGCATCACTATCATCTGTGGAGCTTTACTTCATCCCATAGTTATCAAACCAACATCTCAGACAGAAACTGAGCAGAAGATCACCTATACCCTCCCTGGAGAACAAGTGCAAGGTTTTGGGAGCTCTGGAGATTCAGTTGTACAGTCGCTTGAGCAAGAACAGGGCCTCAAATCTGGGATTGAACTGGAAGAAGTGGAACCAGTACAGGTTAATCCAAAACAACAGGACAATACAAGTAAAAATAGGCTCTTGGATTTGACAGTGCTAAAAGAAGGCGGTTTTTTGTGTTATTCAGCCTTTGGGCTCTTTGCAACATTGGGCTTTTTTGCGCCACAGCTGTATGTGGTGGAGCTGAGTGCCAGTTTGGGAACTGAGAGGGACAAGGCTGCCTATATGCTGTCAACAATGGCCATCTCAGAGATCTTTGGACGTCTTTCTATCGGATGGGTCATGAATTGTGGATGCATCAGGAAGATCTTTGTTCTTCTCATATGTGTGTCACTGATGTGTCTGGTGCTGGTGTTGTTCACCATAGTAAATGGCTTCTGGGGACTGGTGGTGTGCTGTGTGCTTTATGGCTTCTTACTCGGAAATATCGCTTCCACACACATCCCAATGCTGGCAGAGGATGACGTTGTAGGAATCCAGAGGATGCCCTTAGCTGTTGGTGTCTACGTCTGCATTCAGAGCTTTGCAGGACTGGCTGGTCCACCATTAGGAGGCGTCCTTGTGGATATTACACAAAACTACAGTGCTGCATTCTACTCCTGCGCTGCAGGAATGGGATTAGGTGCCATTTTCCTTGGGCTTGTACGTCCAGCCAAGACAGGTCATCTTTGCAGAAGGAGGAAAAATGGAGAGAATAACTCTGCGGTGGAGCAAGTGTCTAAATCAAGCCAGAGGAATTGCTAGAACAGGGTAACCAAGAAGTTTAGTcttaaaaacacagaacattAGGAACTATCAAACCTGTTGATATAATAGGAACACATTCAAACTGAATGTACTGGAACTTTGGCTACGTTATAATTCATGAGAATTGGGTAAAAGGtttttcacccaaaatgaaaattctgtcatgaaTGACGTAGAAGAACCAATATTGTTCTATTTTTGTTCATCTACGGGTGGTCTTCATTTACCTACATTTATTGTGGTTTAAGTGTGTTTTGATTAATGTTTAAATGCaaagaaaagttttattaaattattgtagtttttattccaaaaataaaccaaaatttgACACGACAGTGTACATAATGACAGAAATGCCATATTTGGGTTAACCATTCTtccattttcatttattcattgtcttgtcggtttagtccctttattaatttggggtcgccacagcggaatgaatcgccaacttatccatcaagtttttacgcagcggatacctttccagctgcaacccatctctgggaaacatccacacacacattcacacacacacttatacactacggacaatttagcctacccaattcacctgtaccgcatgtctttggactgtggggaaaacaggagcacccaaaggaaacccacgcgaacgcagggaaaacatgcaaactccacacagaaacgccaactgagccgagcctcgaaccagcgacccagccaccttcttgctgtgaggcgacaacactacctactgcgccactgcttccccCTCTTCTATTTTTGCATGTGAATTTGTTGCTCATACACTGATTTCATAAATATGACTATTATACAATGACATACAAACCCCATTTGGAATGACTCTAAACACTGCTTCTCTGTTCTAGAAACAGAAGAAATGACCTTCAACAGCAAACCCCATTTTCGTGGTTTTAGAAATTATTGCCAATATCTATGGATGCTTACAGCCACTTATAGCTAAAGCATTGACCAAAGATGTTTAAACTCATTGAAAAACAATCTAAATTGTAAAGAGATGTTATAATTATATAGAGATgttattatatattcattattattattattattactattattattaataataaatagtgaTAAATAGCTCTTTATTGACTCTTTATGAACTAAATGCTAAACCCAGgtaaactacagtattttaaTAATCCTAGCAGTTTGTTTAGGGTGTTGTTTGGTCTTTTCTACAATGATTCTTCAACTGTGGATGAGATTTGCATCTCTGTTATATAGAGAGAATTGTGAATTCAAAACATTACAGAGCACAGATTGATGGAATTGTGCAACAAGGAAGAAAGATGTCCAAAATAATGCAATGGCAAattcaaatgtaaatgtttcttacGAATGATGACTTTCATCATTCACCTCTCTTAGAAAAACTGTATTTCTTTGGTATTTTAATATTGGAAAAGAATTGTATTTGTTGTATCTTCAGTGGAATGTGATGTGAATATGAAATGATCTCTTCTGTTTCTgcacaatataattttttataacaatCTTTGAATCTGACTGAAGAATAAATACACACCTTTTA
>TCONS_00010221
TGAACTCCTGGCAGTGAACAGACCCCAGCACAGCCCTGGAGCTCCAGTAAAGCCCTCACTCAGGAGCAGGTCGCAGGTGAAAATGGCACAGTGGATTTTCCGACTGAGAAGTTGCTTTGGCTCTAAAGTTTATTCCGAGGTCCCAGATGGTGGttggGGTTGGATTGTGGCTGTGGCGTTTTTCCTGGTGGAGGTGTTCACTTATGGGGTTATCAAAAGTTTTGGAATCTTCCTTAAGGACCTAATGAGTGACTTTAATGAAACAAACAGCCGAGTATCATGGATCATTTCAATATGTGTCTTTGTTATGACTTTCACAGCTCCTCTATCAACCGTGCTGAGTAATCGATTTGGCTTCCAGCCTGTTGTGATGTTTGGAGGGTTTCTCATATCTCTGGGCACAATCTCAACAGCATTCACCAGCTCTATCAATCAGATGTACCTTACTATTGGGATTGTGACTGGACTGGGTTATTGTTTGACATTTCTACCAACCGTCACAATCTTGTCCCAGTACTTCAGCAGGCGTCGTTCTGTGGTCACAGCCATGGCATCCACTGGAGAGTCATTTGCTATATTTGCTTTTGCTCCAGCATTCACAGCTCTTAAGAACTACATCGGCTGGAGGTACACATTTGTGGTGATTGGGACGTTACAGGGCATCACTATCATCTGTGGAGCTTTACTTCATCCCATAGTTATCAAACCAACATCTCAGACAGAAACTGAGCAGAAGATCACCTATACCCTCCCTGGAGAACAAGTGCAAGGTTTTGGGAGCTCTGGAGATTCAGTTGTACAGTCGCTTGAGCAAGAACAGGGCCTCAAATCTGGGATTGAACTGGAAGAAGTGGAACCAGTACAGGTTAATCCAAAACAACAGGACAATACAAGTAAAAATAGGCTCTTGGATTTGACAGTGCTAAAAGAAGGCGGTTTTTTGTGTTATTCAGCCTTTGGGCTCTTTGCAACATTGGGCTTTTTTGCGCCACAGCTGTATGTGGTGGAGCTGAGTGCCAGTTTGGGAACTGAGAGGGACAAGGCTGCCTATATGCTGTCAACAATGGCCATCTCAGAGATCTTTGGACGTCTTTCTATCGGATGGGTCATGAATTGTGGATGCATCAGGAAGATCTTTGTTCTTCTCATATGTGTGTCACTGATGTGTCTGGTGCTGGTGTTGTTCACCATAGTAAATGGCTTCTGGGGACTGGTGGTGTGCTGTGTGCTTTATGGCTTCTTACTCGGAAATATCGCTTCCACACACATCCCAATGCTGGCAGAGGATGACGTTGTAGGAATCCAGAGGATGCCCTTAGCTGTTGGTGTCTACGTCTGCATTCAGAGCTTTGCAGGACTGGCTGGTCCACCATTAGGAGGCGTCCTTGTGGATATTACACAAAACTACAGTGCTGCATTCTACTCCTGCGCTGCAGGAATGGGATTAGGTGCCATTTTCCTTGGGCTTGTACGTCCAGCCAAGACAGGTCATCTTTGCAGAAGGAGGAAAAATGGAGAGAATAACTCTGCGGTGGAGCAAGTGTCTAAATCAAGCCAGAGGAATTGCTAGAACAGGGTAACCAAGAAGTTTAGTcttaaaaacacagaacattAGGAACTATCAAACCTGTTGATATAATAGGAACACATTCAAACTGAATGTACTGGAA
>TCONS_00010222
GAGGAGCTCAATGTCGAGACACCACATGAACTCCTGGCAGTGAACAGACCCCAGCACAGCCCTGGAGCTCCAGTAAAGCCCTCACTCAGGAGCAGGTCGCAGGTGAAAATGGCACAGTGGATTTTCCGACTGAGAAGTTGCTTTGGCTCTAAAGTTTATTCCGAGGTCCCAGATGGTGGTTGGggttGGATTGTGGCTGTGGCGTTTTTCCTGGTGGAGGTGTTCACTTATGGGGTTATCAAAAGTTTTGGAATCTTCCTTAAGGACCTAATGAGTGACTTTAATGAAACAAACAGCCGAGTATCATGGATCATTTCAATATGTGTCTTTGTTATGACTTTCACAGCTCCTCTATCAACCGTGCTGAGTAATCGATTTGGCTTCCAGCCTGTTGTGATGTTTGGAGGGTTTCTCATATCTCTGGGCACAATCTCAACAGCATTCACCAGCTCTATCAATCAGATGTACCTTACTATTGGGATTGTGACTGGTATGTAAAGGCTTACATGTTTGAATGGGACTCTAATGtcaacccttgtgtattgtttaaaTTGACTACCCTGTTGTTATGTTGGTCACTGTTTTTGCCCTGTGCATACTTACTCATGTTAATATATGTTAAAGtgttaaaaaattcaaaattaaCATGTTCTCATCCTAaggttgt
>TCONS_00010223
AAATGGCACAGTGGATTTTCCGACTGAGAAGTTGCTTTGGCTCTAAAGTTTATTCCGAGGTCCCAGATGGTGGTTGGggttGGATTGTGGCTGTGGCGTTTTTCCTGGTGGAGGTGTTCACTTATGGGGTTATCAAAAGTTTTGGAATCTTCCTTAAGGACCTAATGAGTGACTTTAATGAAACAAACAGCCGAGTATCATGGATCATTTCAATATGTGTCTTTGTTATGACTTTCACAGGTGAGAACTTCAACTTTTACATTAAATCATTTAGCCAATGTTTTTATCTCTAGCTATTCCGAAATTGAAAAGGCAAAACAATAGAAGCAATTAGaccaaattaacaaaaatatgtaCCTTTAGGTAGTATGCCAAGTGCCAGTTATTCTAACggtttaaagaaaattatttaaataaataatttaagatgTCTTGACATAGTCGAGTCACTTCTTGAAAGGCTAAAGACTGTTCAGGCTGAGTTAGCATGGGAAagcttttttaaacacaaaaaaataacagcttcatgttgtcttttttatttctatGGCCCTTC

Function

symbol description
slc16a6 Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane.

GO: NA

KEGG:

id description
ko02000 Transporters

Ensembl:

ensembl_id ENSDARG00000104629

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010220 False 3169 polymorphic_pseudogene 0.41 7 20575640 20584439
TCONS_00010221 False 1670 mRNA 0.46 7 20577113 20584413
TCONS_00010222 False 667 lncRNA 0.43 4 20580566 20584439
TCONS_00010223 True 556 lncRNA 0.36 2 20580889 20581988

Neighbor

gene id symbol gene type direction distance location
XLOC_005326 lcmt1 coding downstream 165846 20378376 ~ 20409794 (-)
XLOC_005325 aqp8a.1 coding downstream 202582 20366109 ~ 20373058 (-)
XLOC_005324 aqp8a.2 coding downstream 213579 20354691 ~ 20362061 (-)
XLOC_005323 hbbe2 coding downstream 225011 20349865 ~ 20350629 (-)
XLOC_005322 hbbe3 coding downstream 235097 20339413 ~ 20340543 (-)
XLOC_005328 snx11 coding upstream 20752 20605191 ~ 20616160 (-)
XLOC_005329 snf8 coding upstream 68518 20652957 ~ 20658285 (-)
XLOC_005330 gip coding upstream 77987 20662426 ~ 20665865 (-)
XLOC_005331 nme2a coding upstream 203804 20788243 ~ 20796658 (-)
XLOC_005332 CR753823.1 coding upstream 985344 21569783 ~ 21569899 (-)
XLOC_005321 NA non-coding downstream 240931 20314995 ~ 20334709 (-)
XLOC_005319 CR352324.1 non-coding downstream 386354 20189169 ~ 20189286 (-)
XLOC_005318 NA non-coding downstream 454929 20056971 ~ 20120711 (-)
XLOC_005303 AL772266.1 non-coding downstream 1837111 18738413 ~ 18738529 (-)
XLOC_005298 NA non-coding downstream 2121233 18453207 ~ 18454407 (-)
XLOC_005335 NA non-coding upstream 1579591 22164030 ~ 22220870 (-)
XLOC_005337 NA non-coding upstream 1686061 22270500 ~ 22280703 (-)
XLOC_005340 NA non-coding upstream 1859201 22443640 ~ 22445101 (-)
XLOC_005344 NA non-coding upstream 1960293 22544732 ~ 22559775 (-)

Expression


Co-expression Network