trnae-uuc


Basic Information

Item Value
gene id trnae-uuc
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 3032732 ~ 3032803 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnae-uuc
TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGGCGGCCCGGGTTCGACTCCCGGTATGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-uuc True 72 tRNA 0.58 1 3032732 3032803

Neighbor

gene id symbol gene type direction distance location
irf2a LOC108263359,LOC108434128 coding downstream 889566 2126818 ~ 2143166 (-)
sod3b sod3 coding downstream 1021040 2007909 ~ 2011692 (-)
aip aip,LOC106609959 coding downstream 1025479 2001449 ~ 2007253 (-)
ccdc149b ccdc149b,LOC108263252,LOC107550975,LOC105908379 coding downstream 1067825 1947375 ~ 1964907 (-)
si:ch211-113e8.11 LOC108263804 coding downstream 1137633 1893586 ~ 1895099 (-)
spcs3 spcs3,LOC106602378 coding upstream 255927 3288730 ~ 3293879 (-)
wdr17 wdr17 coding upstream 299165 3331968 ~ 3433129 (-)
cep44 cep44 coding upstream 650640 3683443 ~ 3699520 (-)
galnt7 galnt7 coding upstream 810676 3843479 ~ 3869764 (-)
galntl6 galntl6,si:ch211-15e22.3,LOC107670789 coding upstream 844387 3877190 ~ 4089518 (-)
G39854 NA non-coding downstream 305258 2725305 ~ 2727474 (-)
G39774 NA non-coding downstream 554308 2477692 ~ 2478424 (-)
G39707 NA non-coding downstream 892883 2137447 ~ 2139849 (-)
G39705 NA non-coding downstream 906085 2123975 ~ 2126647 (-)
G39699 tmem134 non-coding downstream 919198 2109110 ~ 2113534 (-)
G40250 NA non-coding upstream 460862 3493665 ~ 3583108 (-)
G40278 NA non-coding upstream 606961 3639764 ~ 3640380 (-)
G40315 NA non-coding upstream 636044 3668847 ~ 3672053 (-)
G40316 NA non-coding upstream 640347 3673150 ~ 3673811 (-)
G40323 NA non-coding upstream 669418 3702221 ~ 3712833 (-)
tenm3 tenm3,LOC108434131 other downstream 48529 2220147 ~ 2984203 (-)
G39720 NA other downstream 858981 2173358 ~ 2173751 (-)
lgi2b LOC108263253,LOC108411628 other downstream 1053183 1969763 ~ 1979549 (-)
G39603 casp6,LOC108263800,LOC108434124 other downstream 1155149 1871933 ~ 1877583 (-)
cntln cntln,LOC108263774 other downstream 1663720 1270445 ~ 1369012 (-)
trnah-gug_2 NA other upstream 1063 3033866 ~ 3033937 (-)
trnah-gug_3 NA other upstream 1679 3034482 ~ 3034553 (-)
dclk2a LOC108263760,LOC108429594 other upstream 1512336 4545139 ~ 4609450 (-)
tmem184c tmem184c,LOC107742544,LOC107670728,LOC107654969 other upstream 1861099 4893902 ~ 4906239 (-)
lsm6 lsm6 other upstream 2170903 5203706 ~ 5227967 (-)

Expression


Co-expression Network