Gene
RNA
| Item | Value |
|---|---|
| gene id | G166390 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 16000219 ~ 16000512 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU197027 | True | 294 | lncRNA | 0.51 | 1 | 16000219 | 16000512 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ahsa1b | ahsa1,LOC108425677,LOC107732084 | coding | downstream | 7323 | 15987086 ~ 15992896 (-) |
| jmjd1ca | LOC108270245 | coding | downstream | 18435 | 15917801 ~ 15981784 (-) |
| egr2a | egr2a,LOC108269483 | coding | downstream | 85509 | 15906357 ~ 15914710 (-) |
| rtkn2a | LOC108269925 | coding | downstream | 110681 | 15883398 ~ 15889538 (-) |
| zfyve28 | zfyve28 | coding | downstream | 121875 | 15864120 ~ 15878344 (-) |
| si:dkey-229e3.2 | LOC108269466 | coding | upstream | 550 | 16001062 ~ 16007423 (-) |
| eprs1 | eprs,LOC107732550 | coding | upstream | 9965 | 16010477 ~ 16035433 (-) |
| LOC113539022 | NA | coding | upstream | 15840 | 16016352 ~ 16016484 (-) |
| zgc:174356 | LOC108269442,LOC107719194,LOC107662648,LOC106601284 | coding | upstream | 119205 | 16119717 ~ 16136443 (-) |
| LOC117598246 | NA | coding | upstream | 151141 | 16151653 ~ 16155407 (-) |
| G166380 | NA | non-coding | downstream | 66782 | 15933157 ~ 15933437 (-) |
| G166319 | NA | non-coding | downstream | 103649 | 15895667 ~ 15896570 (-) |
| G166289 | NA | non-coding | downstream | 153964 | 15664486 ~ 15846255 (-) |
| G166286 | NA | non-coding | downstream | 392697 | 15605903 ~ 15607522 (-) |
| LOC113539013 | NA | non-coding | downstream | 509211 | 15481130 ~ 15491008 (-) |
| G166484 | NA | non-coding | upstream | 266717 | 16267229 ~ 16267515 (-) |
| G166633 | NA | non-coding | upstream | 444329 | 16444841 ~ 16446005 (-) |
| G166865 | NA | non-coding | upstream | 744094 | 16744606 ~ 16744822 (-) |
| LOC113538645 | NA | non-coding | upstream | 838569 | 16839081 ~ 16865427 (-) |
| G166967 | NA | non-coding | upstream | 924764 | 16925276 ~ 16928196 (-) |
| eml5 | eml5,LOC108435760 | other | downstream | 237501 | 15715560 ~ 15762718 (-) |
| ktn1 | ktn1,LOC107668535 | other | downstream | 336724 | 15633002 ~ 15663495 (-) |
| pgfb | pgf,LOC108435746 | other | downstream | 678168 | 15303235 ~ 15322051 (-) |
| capn3a | capn3,LOC108269768,LOC108435782 | other | downstream | 882855 | 15107120 ~ 15117364 (-) |
| nenf | nenf | other | downstream | 918014 | 15079696 ~ 15082205 (-) |
| mideasb | elmsan1 | other | upstream | 872767 | 16873279 ~ 16898730 (-) |
| htr1b | htr1e,LOC108269541 | other | upstream | 1166356 | 17166868 ~ 17247823 (-) |
| cmpk2 | cmpk2 | other | upstream | 1615226 | 17615738 ~ 17624534 (-) |
| G167566 | apob | other | upstream | 2305231 | 18305743 ~ 18316207 (-) |
| gdf7 | LOC108270114 | other | upstream | 2374891 | 18375403 ~ 18382455 (-) |
