Gene
RNA
| Item | Value |
|---|---|
| gene id | G166484 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 16267229 ~ 16267515 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU197138 | True | 287 | lncRNA | 0.37 | 1 | 16267229 | 16267515 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117598246 | NA | coding | downstream | 111822 | 16151653 ~ 16155407 (-) |
| zgc:174356 | LOC108269442,LOC107719194,LOC107662648,LOC106601284 | coding | downstream | 130786 | 16119717 ~ 16136443 (-) |
| eprs1 | eprs,LOC107732550 | coding | downstream | 231796 | 16010477 ~ 16035433 (-) |
| LOC113539022 | NA | coding | downstream | 250745 | 16016352 ~ 16016484 (-) |
| si:dkey-229e3.2 | LOC108269466 | coding | downstream | 259806 | 16001062 ~ 16007423 (-) |
| LOC113538604 | gpr68 | coding | upstream | 2338 | 16269853 ~ 16278268 (-) |
| ccdc88c | LOC108270124 | coding | upstream | 14826 | 16282341 ~ 16336945 (-) |
| sptb | sptb,LOC108270244,LOC108425666,LOC107662651,LOC107582900,LOC107602260 | coding | upstream | 70197 | 16337712 ~ 16365260 (-) |
| LOC117598247 | LOC108270244 | coding | upstream | 91071 | 16358586 ~ 16359488 (-) |
| stard9 | stard9,LOC107662650,LOC107679770,LOC107724018,LOC107730214,LOC107572014,LOC108270056 | coding | upstream | 112342 | 16379857 ~ 16408142 (-) |
| G166390 | NA | non-coding | downstream | 266717 | 16000219 ~ 16000512 (-) |
| G166380 | NA | non-coding | downstream | 333792 | 15933157 ~ 15933437 (-) |
| G166319 | NA | non-coding | downstream | 370659 | 15895667 ~ 15896570 (-) |
| G166289 | NA | non-coding | downstream | 420974 | 15664486 ~ 15846255 (-) |
| G166286 | NA | non-coding | downstream | 659707 | 15605903 ~ 15607522 (-) |
| G166633 | NA | non-coding | upstream | 177326 | 16444841 ~ 16446005 (-) |
| G166865 | NA | non-coding | upstream | 477091 | 16744606 ~ 16744822 (-) |
| LOC113538645 | NA | non-coding | upstream | 571566 | 16839081 ~ 16865427 (-) |
| G166967 | NA | non-coding | upstream | 657761 | 16925276 ~ 16928196 (-) |
| G167011 | NA | non-coding | upstream | 699941 | 16967456 ~ 16969965 (-) |
| eml5 | eml5,LOC108435760 | other | downstream | 504511 | 15715560 ~ 15762718 (-) |
| ktn1 | ktn1,LOC107668535 | other | downstream | 603734 | 15633002 ~ 15663495 (-) |
| pgfb | pgf,LOC108435746 | other | downstream | 945178 | 15303235 ~ 15322051 (-) |
| capn3a | capn3,LOC108269768,LOC108435782 | other | downstream | 1149865 | 15107120 ~ 15117364 (-) |
| nenf | nenf | other | downstream | 1185024 | 15079696 ~ 15082205 (-) |
| mideasb | elmsan1 | other | upstream | 605764 | 16873279 ~ 16898730 (-) |
| htr1b | htr1e,LOC108269541 | other | upstream | 899353 | 17166868 ~ 17247823 (-) |
| cmpk2 | cmpk2 | other | upstream | 1348223 | 17615738 ~ 17624534 (-) |
| G167566 | apob | other | upstream | 2038228 | 18305743 ~ 18316207 (-) |
| gdf7 | LOC108270114 | other | upstream | 2107888 | 18375403 ~ 18382455 (-) |
