G167617


Basic Information

Item Value
gene id G167617
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 18399171 ~ 18399424 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU198433
ggttgttggtaccaggtgggatagtttgagtatttcagtaacttctgatctcctgggattttcgtACACACAACATTCTATAGAGTTtaggtggaaacgccttgttgataagagaggtcagaggaaaatggccaaattggtttgagctgccaggaaggatacagaaactcaaataatcattctttacaaccgtggtgagcatgGACAAAACATTGACCTTGAGATGGATGAGCCATGACATCCTGTtagccaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198433 True 254 lncRNA 0.43 1 18399171 18399424

Neighbor

gene id symbol gene type direction distance location
c10h1orf115 NA coding downstream 108696 18287763 ~ 18290475 (-)
alkal2b LOC108425626 coding downstream 149939 18243360 ~ 18249232 (-)
sh3yl1 sh3yl1,LOC107733179,LOC107674108,LOC107594817 coding downstream 168696 18191959 ~ 18230475 (-)
id2a id2,id2a,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC106566577 coding downstream 472121 17924721 ~ 17927050 (-)
asap2a asap2 coding downstream 618119 17708618 ~ 17781052 (-)
yy1a yy1a,LOC100304682,LOC108425622,LOC103039658,LOC107674084,LOC107594811,LOC107733162,LOC108258103 coding upstream 287 18399711 ~ 18403969 (-)
evla LOC108425620,LOC108270303 coding upstream 15954 18415378 ~ 18437153 (-)
eml1 eml1 coding upstream 60048 18459472 ~ 18512607 (-)
pkdccb LOC108270133 coding upstream 120473 18519897 ~ 18525899 (-)
rpusd2 rpusd2,LOC103399345 coding upstream 152259 18551683 ~ 18556050 (-)
G167580 NA non-coding downstream 82472 18316478 ~ 18316699 (-)
G167579 NA non-coding downstream 95832 18302105 ~ 18303339 (-)
G167577 NA non-coding downstream 102616 18294983 ~ 18296555 (-)
G167572 NA non-coding downstream 127355 18271603 ~ 18271816 (-)
G167250 NA non-coding downstream 726398 17669650 ~ 17672773 (-)
G167618 NA non-coding upstream 5129 18404553 ~ 18404775 (-)
G167684 NA non-coding upstream 59031 18458455 ~ 18458794 (-)
G167783 NA non-coding upstream 164547 18563971 ~ 18564379 (-)
G167786 NA non-coding upstream 172079 18571503 ~ 18571893 (-)
G167802 NA non-coding upstream 197157 18596581 ~ 18596886 (-)
gdf7 LOC108270114 other downstream 16716 18375403 ~ 18382455 (-)
G167566 apob other downstream 82964 18305743 ~ 18316207 (-)
cmpk2 cmpk2 other downstream 774637 17615738 ~ 17624534 (-)
htr1b htr1e,LOC108269541 other downstream 1151348 17166868 ~ 17247823 (-)
mideasb elmsan1 other downstream 1500441 16873279 ~ 16898730 (-)
bahd1 bahd1,LOC108436768 other upstream 200871 18600295 ~ 18642889 (-)
LOC113538624 LOC107572756,LOC107690120,LOC107579140,LOC107722728,LOC107690130 other upstream 440191 18839615 ~ 18847696 (-)
G168015 arhgap5,LOC107733129,LOC107594795,LOC107719447 other upstream 562284 18961708 ~ 18966613 (-)
gpx2 gpx2,LOC102306767,LOC100700650 other upstream 1187500 19586924 ~ 19588902 (-)
LOC113538862 LOC108269633,LOC103039104,LOC107671782,LOC107668202 other upstream 1189944 19589368 ~ 19595214 (-)

Expression


Co-expression Network