prlh2r (LOC108269650,LOC108425589)


Basic Information

Item Value
gene id prlh2r
gene name LOC108269650,LOC108425589
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 18569379 ~ 18578308 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU198543
tgttgatttaaatttttcttcttcttcttaaagaAGACAGAAGTCAGTAGAAGTCAATTAAGAATTTCATAACAAATCTTGGACGCCACTGAAGATTACAAGTTcagtgttaattataaagattagtAAGGTGGATTTTGCCTTTAAGGTGTGCTTGTTCTTAATTAGAATGAAAGCCTGAAGACACACTGATCTTTTTTGAATAATATTACACATAAACTTAACCGTTCCCTTTGTATGACTGTATCCTGTAAAATAATGACCAGTAGATGTCAGTAGGTTGTTGAGATTTCTTCCCTGATCCCTCTGAtgcttcttgttgttgttgttgttgttgttgttgttgcctgACTTGTAATTCAATTAGTGGTGCGTGTACAAACATGTTTACAGCCTAAAATTACTCTTAGCCCACAGGAGCtagctttttcttttgtttgtattCTGGAAAATTCTTCCAGAAGCATAGAAATATAACCCTACCTGACCTAGCATTATATCACCTACAAATATGACTAATGAATAAAAGGACACAGGGGATATGACTACAGGAATATCTGATATTACTGATGACATTTCAGTTAAGCAGTATGGCATATATTAGCCCGGCTCTGATTCAGTACAACAGTACAGCCCTCTTGCTCGTGCGATATTACTTAACTGAAATGCCATTCCCATGATTGacagtgtgatattgcttttatataacagttctataaaaaaaggacagaaattaatattgagcagctgacatttcagacacaatatagccaaatattttgtttatttttgccccATTAACGAAAACAGTTCCAAACAAGCGACACCTGGATAGTGCTgcgtgttgccatgccaacgcacagactgactgacagcccataATAAGTGCAGTAACGATCTCAGTGTACTGAACTATCGCTAGAAATGGACTAGCGGAGTAATACAAACAGTGAAGTGTCCCAGAGCAACTAGTGCTATTATTAGACCGGAACTAACTGCTGTATAATGtaatttgtttcatattaatggaaATAGTGAAGTGAAAAAGTTATGGTGCGTTCAGGTCATGTCGGAAAGCTCGTATTTACGAGTTGAACGCACATGAACGCCACCACAAAGTCGTAACTACGAGTGAGATTTTGTCTGAGCTCCGAGTTTCCGAGTTGGGATGTTgtgtcagtaagaaaacatTGTGGAATCAAAGGATGTAATGTCTGTAGATTACGGTAAATTAGTTGAAATTGACTGGGTATGTAGCAGTAATATGTCTTtgtcaggcttttttatttacaataaaacaagctaaCTGCCTGCACAAAATACTATAGCAGTACAATTACGGTATAATAGCTATGTAACAATAAAGTTTACAGTggcttcataaattgattaaaaacctaaaaacacagctgatgcgcatctttgttcttcattttctagaagtTGAGTTTTaccttgctgtattttttgtagCTAATTAAGAGAAGGTTCACCGCCATCTTGCTCCGAACAAAGTGACTTGAACTCACCTGACGTCGTAATTCCCAGCTCGAAATTTAAGTTAGCGTATATATGAAGTTTTACGGTAACCATCATGCGGTTATTTTAGTTCAGCTGTAGACACTCTgaaagttctctctctctctcacacacacacacacacatacacagagtttCTTATTAACTACTATATGTAACATGTTTACTAgaatgagacatttattttaaacaagtttcttCAACGAACATCTCAGTTATGTGGGCTAATTTACAATACAATGGACTATTTATTGATGGTAAGAATTCTGTTGCTCTTTAACATGAAATCAGTTTTTTTGATGGAAGGAATAGAAGAAAAGCTCAATTACaatagaaaaaacaaacagtactaTTCTTTCAAAGGATATTCCATTGAAAACGTACGAGTTTTACACTTGTATATAAGTATAGTTAGTATGAATGTGCAGTGATGCTATAGACTGTAGgttatttacagtaatgtttaCGACATCTGgctgtaatatataatagaaataaGGTGG
>XM_026934337.2
AAAGTGACTTGAACTCACCTGACGTCGTAATTCCCAGCTCGAAATTTAAGTTAGCGTATATATGAAGTTTTACGGTAACCATCATGCGGTTATTTTAGTTCAGCTGTAGACACTCTgaaagttctctctctctctcacacacacacacacacatacacagagtttCTTATTAACTACTATATGTAACATGTTTACTAgaatgagacatttattttaaacaagtttcttCAACGAACATCTCAGTTATGTGGGCTAATTTACAATACAATGGACTATTTATTGATGaaataaGGTGGTGATGGCGGAGGCTGGTCCTCTCTCACTTCCAGCGCAGTGACGTGGAGAGtagagaaggagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgctggcCATCCTCCAGTCTGCTGTGGAGCGACAGGAAGACGAGAGCAGCTTCAGTGAACTTATGTTTGGATCATCTACTGCCTACTTGAGATGTGATCAACTCGACAAAGGAAGGTGAAAGCTGTGGTGAACATGGACTCCCTCCTGAATGGAACCTGGGAGAACACCACTTTCAATGTATCTCCTCCATCTGTCTCCTCTTTCAACGGACTGAACCTTCTGATGGAACTAAAGATGCTGTTTGTCCCTCTCTACGCCGTACTAGTCCTAGTAGCCTGCTGTGGAaacctcttcctcctcttcctcatcggGTTTAACAAGAAGCTTCACAGCACAACAAACTTCCTGATTGGAAACTTGGCCCTGGCCGACTTGGTGATGTGTCTTTTCTGTGTGCCCCTGACTGTATTTTATGCCTTCGATGAGCGTGGTTGGGTTTTTGGGAATTTCATGTGCCGTTTTGTCTCGCTTATGCAGACTGCGACTGTCTTTGCGGCGGTCCTGTCTCTGACGGCCATAGCAGTGGACCGTTACATTGTGGTTGCTTATCCGATTCGTCGACGTATAGGGCGCCATTTGTGTACTGGCCTGGTGCTAAGCATATGGCTCTGTGCCCTGGTAATGTCCATCCCTGCTACCGTACACACTGTGTATTTGGATCTGAGCGCTGCTGGTCATCACATGGCCGTGTGTGAGGAGTTCTGGCAAGAGCAGGAGCTTGGTCGGCTCATCTACTCGTGCTTCTTTCTGCTCCTCTCCTATTTTGTTCCTCTTGCAGCTGTGTCTATATCCTACTGTGCCATTTCGTGCCACCTCCAGCACAGGGCTACACAGGGACTTATAGCTGCCATTCCCTCCAATCAGGAGAAATGGGGCCGCAAGAGGCGCAAGACCTTCCGCCTGCTGCTTATATCAGTGCTGTGTTTTGCATTCTCCTGGCTCCCCTTGCAGGTGGTCAACCTCATCCGTGACCTGGACACTGACTTTGTTATCTTGAGCAAGAGTCATGTCAATGTGATCCAGGTTTCATGCCATTTGTTAGCCATGAGCTCTGCATGCTTTAACCCTTTTATCTATGCTTCTCTGCATGACAAGTTTTTGTCCTACTTGTGCCGCCACATGTTCCAGAGGCGCAGACAATCTCAGGCCCAAAGCAGCTCCACCACCTCCAGCCGCTTACCTCGCCAACACACCAGCTCCACCCTGGCTGGTATTCCCATGGCTGTGAGCAAGACACTACAAGAATGAATTTAGTCAGTCACTTTAGCCATCAACATTATGCGTTCTTAGAAATGGTACTGCACCTTAACAAGTCACCACcatgtttatgtaaatgtgtacTGCATAAGGCACTGTAGGGTGGATtgtatatgttgtatatatgGATGCTCTGCAAAGCCTGCTGAACATATTCTCaaaatagtagtagtaaaaaGTAATAGTTAGCTGCCTGCTATATGTTATTAACACATAAAGTAATGCTGTGACTGTTTAATAACACAGTGCTGTACTTTTTTGTTCACGTTTCATTTGCCTGGCCATTTTGTCTTGTTACAAACTGTAATGTGTGTACAGGTGGTTGTAATATGGAATTGTTTTATGCATGTATTGTGAATATATTGCATTGAATTTGTAAATT
>XM_026934338.2
AAAGTGACTTGAACTCACCTGACGTCGTAATTCCCAGCTCGAAATTTAAGTTAGCGTATATATGAAGTTTTACGGTAACCATCATGCGGTTATTTTAGTTCAGCTGTAGACACTCTgaaagttctctctctctctcacacacacacacacacatacacagagtttCTTATTAACTACTATATGTAACATGTTTACTAgaatgagacatttattttaaacaagtttcttCAACGAACATCTCAGTTATGTGGGCTAATTTACAATACAATGGACTATTTATTGATGCGCAGTGACGTGGAGAGtagagaaggagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgctggcCATCCTCCAGTCTGCTGTGGAGCGACAGGAAGACGAGAGCAGCTTCAGTGAACTTATGTTTGGATCATCTACTGCCTACTTGAGATGTGATCAACTCGACAAAGGAAGGTGAAAGCTGTGGTGAACATGGACTCCCTCCTGAATGGAACCTGGGAGAACACCACTTTCAATGTATCTCCTCCATCTGTCTCCTCTTTCAACGGACTGAACCTTCTGATGGAACTAAAGATGCTGTTTGTCCCTCTCTACGCCGTACTAGTCCTAGTAGCCTGCTGTGGAaacctcttcctcctcttcctcatcggGTTTAACAAGAAGCTTCACAGCACAACAAACTTCCTGATTGGAAACTTGGCCCTGGCCGACTTGGTGATGTGTCTTTTCTGTGTGCCCCTGACTGTATTTTATGCCTTCGATGAGCGTGGTTGGGTTTTTGGGAATTTCATGTGCCGTTTTGTCTCGCTTATGCAGACTGCGACTGTCTTTGCGGCGGTCCTGTCTCTGACGGCCATAGCAGTGGACCGTTACATTGTGGTTGCTTATCCGATTCGTCGACGTATAGGGCGCCATTTGTGTACTGGCCTGGTGCTAAGCATATGGCTCTGTGCCCTGGTAATGTCCATCCCTGCTACCGTACACACTGTGTATTTGGATCTGAGCGCTGCTGGTCATCACATGGCCGTGTGTGAGGAGTTCTGGCAAGAGCAGGAGCTTGGTCGGCTCATCTACTCGTGCTTCTTTCTGCTCCTCTCCTATTTTGTTCCTCTTGCAGCTGTGTCTATATCCTACTGTGCCATTTCGTGCCACCTCCAGCACAGGGCTACACAGGGACTTATAGCTGCCATTCCCTCCAATCAGGAGAAATGGGGCCGCAAGAGGCGCAAGACCTTCCGCCTGCTGCTTATATCAGTGCTGTGTTTTGCATTCTCCTGGCTCCCCTTGCAGGTGGTCAACCTCATCCGTGACCTGGACACTGACTTTGTTATCTTGAGCAAGAGTCATGTCAATGTGATCCAGGTTTCATGCCATTTGTTAGCCATGAGCTCTGCATGCTTTAACCCTTTTATCTATGCTTCTCTGCATGACAAGTTTTTGTCCTACTTGTGCCGCCACATGTTCCAGAGGCGCAGACAATCTCAGGCCCAAAGCAGCTCCACCACCTCCAGCCGCTTACCTCGCCAACACACCAGCTCCACCCTGGCTGGTATTCCCATGGCTGTGAGCAAGACACTACAAGAATGAATTTAGTCAGTCACTTTAGCCATCAACATTATGCGTTCTTAGAAATGGTACTGCACCTTAACAAGTCACCACcatgtttatgtaaatgtgtacTGCATAAGGCACTGTAGGGTGGATtgtatatgttgtatatatgGATGCTCTGCAAAGCCTGCTGAACATATTCTCaaaatagtagtagtaaaaaGTAATAGTTAGCTGCCTGCTATATGTTATTAACACATAAAGTAATGCTGTGACTGTTTAATAACACAGTGCTGTACTTTTTTGTTCACGTTTCATTTGCCTGGCCATTTTGTCTTGTTACAAACTGTAATGTGTGTACAGGTGGTTGTAATATGGAATTGTTTTATGCATGTATTGTGAATATATTGCATTGAATTTGTAAATT

Function

NR:

description
prolactin-releasing peptide receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006935 chemotaxis biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004950 chemokine receptor activity molecular_function
GO:0004983 neuropeptide Y receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198543 True 2042 lncRNA 0.36 1 18569379 18571420
XM_026934337.2 False 2037 mRNA 0.46 4 18570890 18578308
XM_026934338.2 False 1993 mRNA 0.45 4 18570890 18578308

Neighbor

gene id symbol gene type direction distance location
ccdc32 c9h15orf57 coding upstream 703 18563403 ~ 18568676 (+)
disp2 disp2 coding upstream 17676 18535334 ~ 18551703 (+)
degs2 degs2,LOC107697737,LOC107733197 coding upstream 154975 18408090 ~ 18414404 (+)
tpp1 tpp1 coding upstream 173108 18388105 ~ 18396271 (+)
LOC113539017 NA coding upstream 249303 18319970 ~ 18320076 (+)
itpka itpka coding downstream 92134 18670442 ~ 18681876 (+)
LOC113538626 LOC108269552,LOC103041189,LOC108436737 coding downstream 224946 18803254 ~ 18809458 (+)
heatr4 heatr4 coding downstream 233949 18812257 ~ 18819683 (+)
adprs adprhl2,LOC107561543,LOC107697751,LOC107733180,LOC107594801,LOC107674064 coding downstream 247005 18825313 ~ 18832116 (+)
cinp cinp coding downstream 272589 18850897 ~ 18854826 (+)
G167698 NA non-coding upstream 26872 18542308 ~ 18542507 (+)
G167665 NA non-coding upstream 55382 18513739 ~ 18513997 (+)
G167621 NA non-coding upstream 99375 18459498 ~ 18470004 (+)
G167636 NA non-coding upstream 110387 18458439 ~ 18458992 (+)
G167556 gdf7,LOC108270114,LOC108425593,LOC107594862,LOC107674098,LOC107733118,LOC107563371,LOC107719468 non-coding upstream 190619 18377434 ~ 18378760 (+)
G167730 NA non-coding downstream 63984 18642292 ~ 18643418 (+)
G167735 NA non-coding downstream 70047 18648355 ~ 18648562 (+)
G167909 NA non-coding downstream 258783 18837091 ~ 18837322 (+)
G167913 LOC107572756,LOC107690120,LOC107579140 non-coding downstream 261301 18839609 ~ 18841610 (+)
G168011 NA non-coding downstream 398708 18977016 ~ 18978476 (+)
ldah ldah other upstream 195299 18330467 ~ 18374080 (+)
kidins220a LOC108269813,LOC108425633 other upstream 646628 17867416 ~ 17922751 (+)
itgb1bp1 itgb1bp1,LOC107707691,LOC107655317 other upstream 862547 17700467 ~ 17706832 (+)
sox11a sox11b,LOC108269454 other upstream 1138628 17385507 ~ 17430751 (+)
G166976 NA other upstream 1512568 17055674 ~ 17056811 (+)
G168191 NA other downstream 1096605 19674913 ~ 19687591 (+)
LOC113538915 c9h15orf52 other downstream 1144472 19722780 ~ 19766581 (+)
zfyve19 zfyve19 other downstream 1301427 19879735 ~ 19886509 (+)
LOC113538658 NA other downstream 1335035 19913343 ~ 19922486 (+)
G168650 cep170b other downstream 1464169 20042477 ~ 20042935 (+)

Expression


Co-expression Network