G168493


Basic Information

Item Value
gene id G168493
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 19766754 ~ 19766953 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU199462
GTGGGAAACCCTaccaaaagagtggaggttattataacagcaacgagggactaaatctggaatggatgttcaacaaacatatgcgtgtgatggtcaggtgtaaacacacttttggccatatagtgtacatacaaCTGAAGCAAAATCCAAGTGTAATATTGAGTAAGGATCTTGCTTAAAGGCTTAACAGTGACTCTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199462 True 200 lncRNA 0.40 1 19766754 19766953

Neighbor

gene id symbol gene type direction distance location
LOC113538986 LOC108269623,LOC108430634 coding downstream 123139 19629234 ~ 19643615 (-)
LOC113538672 LOC108269607 coding downstream 183504 19528667 ~ 19583250 (-)
LOC113538555 LOC108269630,LOC108441822 coding downstream 241886 19498748 ~ 19524868 (-)
grhl1 grhl1,LOC108269933 coding downstream 344829 19407717 ~ 19421925 (-)
klf11b LOC108270275 coding downstream 374572 19388971 ~ 19392182 (-)
LOC113538599 inafm2 coding upstream 5847 19772800 ~ 19775087 (-)
LOC113538902 pak6,LOC108269614,LOC108430618,LOC100536197,LOC107663165,LOC108237117 coding upstream 73418 19840371 ~ 19867165 (-)
bub1bb bub1b coding upstream 106469 19873422 ~ 19879335 (-)
zgc:162989 ppp1r14d,LOC108269636,LOC105908342,LOC107678771,LOC107663168,LOC107552907,LOC101077163 coding upstream 124641 19891594 ~ 19908747 (-)
LOC113538610 pld4 coding upstream 252266 20019219 ~ 20025636 (-)
G168466 NA non-coding downstream 1027 19763846 ~ 19765727 (-)
LOC113538910 NA non-coding downstream 78645 19687231 ~ 19688109 (-)
LOC117598314 NA non-coding downstream 82608 19683239 ~ 19684146 (-)
LOC117598328 NA non-coding downstream 86085 19679497 ~ 19680669 (-)
G168405 NA non-coding downstream 167856 19598368 ~ 19598898 (-)
G168608 NA non-coding upstream 120362 19887315 ~ 19887830 (-)
G168661 NA non-coding upstream 156152 19923105 ~ 19924187 (-)
G168665 NA non-coding upstream 172863 19939816 ~ 19940040 (-)
G168747 NA non-coding upstream 332174 20099127 ~ 20100572 (-)
G168750 NA non-coding upstream 339260 20106213 ~ 20106858 (-)
LOC113538763 max,LOC108269635,LOC108441826,LOC103037189,LOC100701192,LOC103363129 other downstream 156976 19600130 ~ 19609778 (-)
LOC113538862 LOC108269633,LOC103039104,LOC107671782,LOC107668202 other downstream 171540 19589368 ~ 19595214 (-)
gpx2 gpx2,LOC102306767,LOC100700650 other downstream 177852 19586924 ~ 19588902 (-)
G168015 arhgap5,LOC107733129,LOC107594795,LOC107719447 other downstream 800141 18961708 ~ 18966613 (-)
LOC113538624 LOC107572756,LOC107690120,LOC107579140,LOC107722728,LOC107690130 other downstream 919058 18839615 ~ 18847696 (-)
srp14 srp14,LOC106610862 other upstream 246626 20013579 ~ 20018717 (-)
LOC113529462 LOC108269960 other upstream 531558 20298511 ~ 20301554 (-)
gchfr gchfr,LOC106583112 other upstream 555811 20322764 ~ 20330746 (-)
G169119 NA other upstream 797976 20564929 ~ 20565799 (-)
grem1b LOC108269477 other upstream 1046736 20813689 ~ 20817439 (-)

Expression


Co-expression Network