Gene
RNA
| Item | Value |
|---|---|
| gene id | G171232 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 24598275 ~ 24655253 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU202651 | True | 372 | lncRNA | 0.50 | 2 | 24598275 | 24655253 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem30b | LOC108269804 | coding | downstream | 135339 | 24454401 ~ 24462936 (-) |
| smndc1 | smndc1,LOC107671123,LOC107668620,LOC107552887 | coding | downstream | 148313 | 24443797 ~ 24449962 (-) |
| samd8 | LOC108269803 | coding | downstream | 158021 | 24431395 ~ 24440254 (-) |
| dnal1 | dnal1 | coding | downstream | 189493 | 24403823 ~ 24408782 (-) |
| tedc1 | c9h14orf80 | coding | downstream | 196716 | 24391053 ~ 24401559 (-) |
| cep295 | LOC108269817 | coding | upstream | 318786 | 24974039 ~ 24991828 (-) |
| si:ch211-266o15.1 | LOC108269816 | coding | upstream | 354530 | 25009783 ~ 25046786 (-) |
| nid2a | nid2,wu:fb77a09 | coding | upstream | 401111 | 25056364 ~ 25106759 (-) |
| txndc16 | txndc16 | coding | upstream | 527163 | 25182416 ~ 25206473 (-) |
| ero1a | ero1a,LOC107679999,LOC107693134,LOC107564954,LOC107583613 | coding | upstream | 584833 | 25240086 ~ 25252303 (-) |
| G171184 | NA | non-coding | downstream | 69579 | 24528327 ~ 24528696 (-) |
| G171160 | NA | non-coding | downstream | 103485 | 24418931 ~ 24494790 (-) |
| G171175 | kdm1a | non-coding | downstream | 128789 | 24468223 ~ 24469486 (-) |
| G171056 | NA | non-coding | downstream | 313874 | 24284009 ~ 24284401 (-) |
| G171028 | NA | non-coding | downstream | 350260 | 24247685 ~ 24248015 (-) |
| G171258 | NA | non-coding | upstream | 111657 | 24766910 ~ 24801063 (-) |
| G171257 | NA | non-coding | upstream | 127764 | 24783017 ~ 24915150 (-) |
| G171260 | NA | non-coding | upstream | 157925 | 24813178 ~ 24822221 (-) |
| G171381 | NA | non-coding | upstream | 352846 | 25008099 ~ 25009389 (-) |
| G171542 | NA | non-coding | upstream | 606355 | 25261608 ~ 25262527 (-) |
| luzp1 | luzp1 | other | downstream | 54196 | 24490238 ~ 24544079 (-) |
| greb1 | greb1 | other | downstream | 1418764 | 23148743 ~ 23179511 (-) |
| G170435 | NA | other | downstream | 1734508 | 22855494 ~ 22863767 (-) |
| G170023 | NA | other | downstream | 2482399 | 22115565 ~ 22115876 (-) |
| bmf1 | bmf | other | downstream | 3478650 | 21088303 ~ 21119625 (-) |
| G171256 | NA | other | upstream | 126029 | 24781282 ~ 24926224 (-) |
| G171569 | NA | other | upstream | 603586 | 25258839 ~ 25259362 (-) |
| G171734 | NA | other | upstream | 923686 | 25578939 ~ 25582527 (-) |
| foxn3 | foxn3,LOC107583483,LOC107755777,LOC107751738,LOC107693108,LOC107680774 | other | upstream | 2910005 | 27565258 ~ 27652301 (-) |
| efcab11 | efcab11 | other | upstream | 3016370 | 27671623 ~ 27725757 (-) |
