G173262


Basic Information

Item Value
gene id G173262
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 29014349 ~ 29014929 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU205107
cacacacacacacactctctctctctctcacacacacacacacacacacactctctctctctctctctctctctctctcacacacacacacacactctctctctctcacacacacacacacactctctctctcacacacacacacacactctctctctctcacacacacacacactctctctctcacacacactctcacactctctctcacacacacacacacactctctctcacacacacacacacacactctctctctcacacacacacacacactctctctctcacacacacacacacactctctctctcacacacacacacacactctctctctctctctctctcacacacacacacactctctctctctctctctctctctctctctctctctctctctctcacacacacacacacacacacacactctctctctctctctctctcacacacacacacacacacactctctctca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205107 True 480 lncRNA 0.50 3 29014349 29014929

Neighbor

gene id symbol gene type direction distance location
khk khk,LOC107729261,LOC107693158,LOC107725530 coding downstream 18192 28987359 ~ 28996157 (-)
gpn1 gpn1,LOC107729295,LOC107725955,LOC107682285,LOC107693155 coding downstream 85454 28916376 ~ 28928895 (-)
il17a/f2 LOC108269798 coding downstream 129240 28882252 ~ 28885109 (-)
lrrc57 lrrc57,LOC107682003 coding downstream 136468 28867671 ~ 28877881 (-)
nfkbiab nfkbia coding downstream 242187 28768475 ~ 28772162 (-)
mrpl57 mrpl57 coding upstream 57775 29072704 ~ 29075467 (-)
calm1a LOC108270185 coding upstream 74243 29089172 ~ 29092223 (-)
ndnfl LOC108270182 coding upstream 103444 29118373 ~ 29130728 (-)
LOC113525666 LOC108261332 coding upstream 123091 29138020 ~ 29146605 (-)
G173260 NA non-coding downstream 29108 28933960 ~ 28985241 (-)
G173293 NA non-coding downstream 140031 28873443 ~ 28874318 (-)
G173292 NA non-coding downstream 142394 28871470 ~ 28871955 (-)
G173268 NA non-coding downstream 147674 28865913 ~ 28866675 (-)
G173289 NA non-coding downstream 150182 28862908 ~ 28864167 (-)
G173338 NA non-coding upstream 55106 29070035 ~ 29071425 (-)
G173339 NA non-coding upstream 61334 29076263 ~ 29077297 (-)
G173288 NA non-coding upstream 63485 29078414 ~ 29080610 (-)
G173349 NA non-coding upstream 92947 29107876 ~ 29108297 (-)
G173431 kif26b,kif26ba,LOC108415509 non-coding upstream 216684 29231613 ~ 29231919 (-)
stmn4l stmn4,stmn4l,LOC108413759,LOC107682023,LOC107586609,LOC107693156,LOC107729296,LOC107589635 other downstream 105797 28900904 ~ 28908552 (-)
ralgapa1 ralgapa1,LOC107589631,LOC107725466,LOC107682070,LOC107586611,LOC107693153 other downstream 154338 28798149 ~ 28860011 (-)
G172919 NA other downstream 1101805 27912237 ~ 27912544 (-)
si:ch73-204p21.2 NA other downstream 1103459 27899482 ~ 27910890 (-)
efcab11 efcab11 other downstream 1288592 27671623 ~ 27725757 (-)
G173434 kif26b,LOC107589674 other upstream 220990 29235919 ~ 29239270 (-)
smyd3 smyd3 other upstream 231040 29245969 ~ 29329076 (-)

Expression


Co-expression Network