G173292


Basic Information

Item Value
gene id G173292
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 28871470 ~ 28871955 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU205165
TAACGCTTACCGTATCTAACGTTAATAACGCTTACCGTATCTAACGTTAATAACGCTTACCGTATCTAACGTTAATAACGCTTACCGTATCTACTGTTAATAACGCTTACCGTATCTAACGTTAATAACGCTTACCGTATCTACTGTTAATAACGCTTACCGTATCTAACGTTAATAACGCTTACCGTATCTAACGTTAATAACGCTTACCGTATCTAACGTTAATAACGCTTACCGTATCTAACGATAATAACGC

Function

NR:

description
PREDICTED: dehydrogenase/reductase SDR family member 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205165 True 256 lncRNA 0.36 3 28871470 28871955

Neighbor

gene id symbol gene type direction distance location
nfkbiab nfkbia coding downstream 99308 28768475 ~ 28772162 (-)
ppp2r3c ppp2r3c,LOC107682116,LOC107725453,LOC106611177 coding downstream 129399 28736318 ~ 28742071 (-)
LOC113534010 fbxo33 coding downstream 141983 28722659 ~ 28729487 (-)
gemin2 gemin2,LOC107589646,LOC107725416 coding downstream 180068 28687175 ~ 28691402 (-)
pnn pnn,LOC107729287,LOC107693145,LOC107682204,LOC107586617 coding downstream 185219 28680699 ~ 28686251 (-)
il17a/f2 LOC108269798 coding upstream 10297 28882252 ~ 28885109 (-)
gpn1 gpn1,LOC107729295,LOC107725955,LOC107682285,LOC107693155 coding upstream 44421 28916376 ~ 28928895 (-)
khk khk,LOC107729261,LOC107693158,LOC107725530 coding upstream 115404 28987359 ~ 28996157 (-)
mrpl57 mrpl57 coding upstream 200749 29072704 ~ 29075467 (-)
calm1a LOC108270185 coding upstream 217217 29089172 ~ 29092223 (-)
G173268 NA non-coding downstream 4795 28865913 ~ 28866675 (-)
G173289 NA non-coding downstream 7303 28862908 ~ 28864167 (-)
G173282 NA non-coding downstream 8862 28861401 ~ 28862608 (-)
G173274 NA non-coding downstream 112564 28757778 ~ 28758906 (-)
G173255 NA non-coding downstream 154799 28715522 ~ 28716671 (-)
G173293 NA non-coding upstream 1488 28873443 ~ 28874318 (-)
G173260 NA non-coding upstream 62005 28933960 ~ 28985241 (-)
G173262 NA non-coding upstream 142394 29014349 ~ 29014929 (-)
G173338 NA non-coding upstream 198080 29070035 ~ 29071425 (-)
G173339 NA non-coding upstream 204308 29076263 ~ 29077297 (-)
ralgapa1 ralgapa1,LOC107589631,LOC107725466,LOC107682070,LOC107586611,LOC107693153 other downstream 11459 28798149 ~ 28860011 (-)
G172919 NA other downstream 958926 27912237 ~ 27912544 (-)
si:ch73-204p21.2 NA other downstream 960580 27899482 ~ 27910890 (-)
efcab11 efcab11 other downstream 1145713 27671623 ~ 27725757 (-)
foxn3 foxn3,LOC107583483,LOC107755777,LOC107751738,LOC107693108,LOC107680774 other downstream 1219169 27565258 ~ 27652301 (-)
stmn4l stmn4,stmn4l,LOC108413759,LOC107682023,LOC107586609,LOC107693156,LOC107729296,LOC107589635 other upstream 28949 28900904 ~ 28908552 (-)
G173434 kif26b,LOC107589674 other upstream 363964 29235919 ~ 29239270 (-)
smyd3 smyd3 other upstream 374014 29245969 ~ 29329076 (-)

Expression


Co-expression Network