G173457


Basic Information

Item Value
gene id G173457
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 29355098 ~ 29359259 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU205369
ctatacaccactatacatcactatacatcgctatacaccgctatacaccgctatacatcactatacatcactatacgccactatacatcactatacaccgctatacgccactatacatcactatacatcactatacaccgctatacgCCACTATACACTgctatacaccgctatacatcactatacatcactatacatcactatacaccgctataccactatacatcactatacatcactatacaccgctatacgCCACTATACACTgctatacaccgctatacatcactatacaccgctatacatcactatacatcactatacatcactatacatcactatacatcactatacaccgctatacgCCACTATACACTgctatacaccgctatacaccgctatacatcactatacatcactatac
>TU205370
tatacaccgctatacatcactatacaccgctatacatcactatacatcgctatacaccgctatacaccgctatacatcactatacatcactatacaccgctatacgccactatacaccgctatacatcactatacatcactatacgccactatacatcactatacaccgctatacgccactatacatcactatacatcactatacaccgctatacgCCACTATACACTgctatacaccgctatacatcactatacatcactatacatcactatacaccgctataccactatacatcactatacatcactatacaccgctatacgCCACTATACACTgctatacaccgctatacatcactatacaccgctatacatcactatacatcactatacatcactatacatcactatacatcactatacaccgctatacgCCACTATACACTgctatacaccgctatacaccgctatacatcactatacatcactatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205369 False 424 lncRNA 0.39 2 29355098 29356090
TU205370 True 493 lncRNA 0.40 2 29355098 29359259

Neighbor

gene id symbol gene type direction distance location
LOC113525666 LOC108261332 coding downstream 208493 29138020 ~ 29146605 (-)
ndnfl LOC108270182 coding downstream 224370 29118373 ~ 29130728 (-)
calm1a LOC108270185 coding downstream 262875 29089172 ~ 29092223 (-)
mrpl57 mrpl57 coding downstream 279631 29072704 ~ 29075467 (-)
khk khk,LOC107729261,LOC107693158,LOC107725530 coding downstream 358941 28987359 ~ 28996157 (-)
G173441 NA non-coding downstream 5199 29344371 ~ 29349899 (-)
G173449 NA non-coding downstream 14338 29340100 ~ 29340760 (-)
G173447 NA non-coding downstream 15487 29339179 ~ 29339611 (-)
G173443 NA non-coding downstream 21054 29332402 ~ 29334044 (-)
G173442 NA non-coding downstream 47620 29277201 ~ 29307478 (-)
smyd3 smyd3 other downstream 26022 29245969 ~ 29329076 (-)
G173434 kif26b,LOC107589674 other downstream 115828 29235919 ~ 29239270 (-)
G173287 NA other downstream 305072 28836892 ~ 29050026 (-)
stmn4l stmn4,stmn4l,LOC108413759,LOC107682023,LOC107586609,LOC107693156,LOC107729296,LOC107589635 other downstream 446546 28900904 ~ 28908552 (-)
ralgapa1 ralgapa1,LOC107589631,LOC107725466,LOC107682070,LOC107586611,LOC107693153 other downstream 495087 28798149 ~ 28860011 (-)

Expression


Co-expression Network