G173458


Basic Information

Item Value
gene id G173458
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 29356472 ~ 29358281 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU205371
ctatacatcactatacatcactatacaccgctatacatcactatacactgctatacaccgctatacatcactatacaccgctatacatcactatacatcactatacaccgctatacatcactatacatcactatacaccactatacaccgctatacatcactatacatcactatacatcactatacaccgctatacgCCACTATACACTgctatacaccgctatacatcactatacatcactatacaccactatacatcactatacaccgctatacatcactatacatcactatacatcactatacatcactatacaccgctatacaccgctatacatcactatacaccgctatacaccgctatacatcactatacaccgctatacatcactatacaccgctatacaccgctatacatcactatacatcactatacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205371 True 438 lncRNA 0.38 2 29356472 29358281

Neighbor

gene id symbol gene type direction distance location
LOC113525666 LOC108261332 coding downstream 209867 29138020 ~ 29146605 (-)
ndnfl LOC108270182 coding downstream 225744 29118373 ~ 29130728 (-)
calm1a LOC108270185 coding downstream 264249 29089172 ~ 29092223 (-)
mrpl57 mrpl57 coding downstream 281005 29072704 ~ 29075467 (-)
khk khk,LOC107729261,LOC107693158,LOC107725530 coding downstream 360315 28987359 ~ 28996157 (-)
G173441 NA non-coding downstream 6573 29344371 ~ 29349899 (-)
G173449 NA non-coding downstream 15712 29340100 ~ 29340760 (-)
G173447 NA non-coding downstream 16861 29339179 ~ 29339611 (-)
G173443 NA non-coding downstream 22428 29332402 ~ 29334044 (-)
G173442 NA non-coding downstream 48994 29277201 ~ 29307478 (-)
smyd3 smyd3 other downstream 27396 29245969 ~ 29329076 (-)
G173434 kif26b,LOC107589674 other downstream 117202 29235919 ~ 29239270 (-)
G173287 NA other downstream 306446 28836892 ~ 29050026 (-)
stmn4l stmn4,stmn4l,LOC108413759,LOC107682023,LOC107586609,LOC107693156,LOC107729296,LOC107589635 other downstream 447920 28900904 ~ 28908552 (-)
ralgapa1 ralgapa1,LOC107589631,LOC107725466,LOC107682070,LOC107586611,LOC107693153 other downstream 496461 28798149 ~ 28860011 (-)

Expression


Co-expression Network