prorp (kiaa0391)


Basic Information

Item Value
gene id prorp
gene name kiaa0391
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 28742052 ~ 28759394 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026925996.2
GAGACTCGTCGCGATGCTACTGACGTCACCCAGGTCGCCGCATTGCTAGTGATACATACATGAGGAGTTTAGGTAGTTATCAGTTTTCTGTTATATTTGAGGTTTTTAAATGTAAGTGAACCGTGTTTTAACTGAAGGAAGAGAAGCAGCAGACTCGTTATTGTGGTCTGGTCTctaattttagtttattttattgtgttagcGCTTTATATTTAACGAGAGTGACAGTAATGCATGTTCAGTGACGTCTGGTTTATTATAGCTAGTTAACTAGATGCACAAAAGTTAATATGAGTTCTTGAAGATGTAATTTGAAGTCAACTGTCATGtcatttaacataaaaaaaatctctaaaaaaaaaaagctagacaTGTCAGAATTTTTGTAATTGTCTTTCCACAATTCTGTGAAATCAGCTAAAAAGCCAGTTTGCAATGGGATCCTTTATTATAACAAATTCAAGGACTTGTCTCAAGCACCTGTGCCCCCTACTTAGGCGCCCTCTTTATCACCAGCGCGCTCCACAAAAGAATAACCAGCCCAGTAATCACCCCTACTGCACGAAAGGAGAGAGAAGACCATCAGAGTTTCATGGCACCAAGCACAGAGACTTCACTCCGAGAGACAGAACTTCATTCCCAAAGTCAGTGTTTGCAGCCGGCAATGCCAGAAGAACTGCTGAGATTTTAAAGAGGAAATCGGGAGCGGATCAGGACCGGGATCAGGACCCGGACCAGGTCAGTACGGGTTCACTGAAAGGCCGGGCAGCTTTTACAGCTCAGATTCCTGATCGGGCTCTGAGCGTTTCAGAATGGAGAGATCTGAAAAGCAGCTCGTCCAGGCCGGAGCGCTTCGAGCTGAGGATGATGGAGGGAATGCTGGCTGACACTGAGGCTGACATCAGCGTCGCTAAATCTCTCCTCAACTACGTCGCTGCTGAAAACGGAACGCTGCCCTATGAACTGCTGCTCAAGTATCTGGCACTTTGTGTCTCTGGTGGCCATCACTCAGAAGTTTCCGACGTCTACGACATCATGAAGAGCTGCTTTAAGACTCTGGACACCGGAGCGTACAGTCTGTTCGTGAAAGGCCTGAGTCACACCGAGCGCTGGAGAGAAGCCCTGATCATCCTGGAAGACATTAAGAAGgtcatcacaccatcatccaGGAATTATGGTGATGCTGTGACCGGGGCTGTTCTCCATGGCGACAGGGAGACGGCGTGGCGTCTGTATGGTGAGCTGATGGATCAGGGACTGATGCCCAACCAGGAAACATGGCGGTGTTTATTTGAGAGTGGTGTGAGTCAGCGTGCACACAAAGACGAACTCCTGGCCATCTTGACCTACATGAGAGAAAACCAGATTTATCCGGAGGAGAAGTTGGTCAGAAGCATTAAAGCGTGGTTTGAAAGTTTACCAGATGAGAACTGGAGAGGGAAGTTTACTTCTGTGGACCCCGGAGGAGTGTGTCGGAGCTGTGGGACAGAGCTGGAGTCCATCCAGCTGACGGAGGAGGAGTACAATCAGCTAAAACACAGAGTGATGGAGGACGTGATCGAGGGCCGGGACGTCTTCAATAAGACCACGCCTGAGGAGCTGGAGAGTTTTAAGAGCTTTGTGCAGAAAAGACCTGCGTTTGATGTGGTGATCGACGGCCTGAACGTAGCGAACATCACACccaagtgtgtaaaatcagagACGcTGTTGGCGGTGGTCTCAGCACTTCAGGGTCTGAATGTTCTGGTTCTGGgcagaaaacacatgcagcAGCCGTCACGTAACTGGAACAGACACGACATGAACCAGATCAAACAGAAAGCACACTGCTTCTTCACTGAGAACAtCTCGGAGGACGACCCGTTCCTGCTCTacgctgcattgcattctgggaacCACTGTAACTTTGTGAGCCGGGACCTGATGAGGGATCACAAGGCGTGTCTCCCGGACAGCGCCACACGACGCCTCTTCTTCAAGTGGCAGCGAGGACATCAGCTCGTGCTCAGCAACTTCATCCCGGGGAAGAAGATCCGCTTTCAGaggaCGTCACGCTATGATACGATAGTCCAGAGTCATGGAAAGACGTGGCACGTACCCTACGATGAGGACGGAGGAGAGCGGAGCACGTATGAAGTTCCACAGAGGTGGCTGTGTCTCAGTAATGACGTGTGAAATGTGTACTAACTATACAGATTAATAAAGAAATGGATTTGCTGgttaatgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcactgcTTAGGAAccaataataaagaaataaagggGAAGAAATAAGCAGAATTGGTTTCTGTGTGATAAAAGCTTTGAAATGGAATAAACTAATATATACACAATCATTATGCCTCATAGATGCCTTTAAATATAAGATGAAgga
>XM_026925997.2
ATGACGTCGAGACTCGAGACTCGTCGCGATGCTACTGACGTCACCCAGGTCGCCGCATTGCTAGTGATACATACATGAGGAGTTTAGCTAAAAAGCCAGTTTGCAATGGGATCCTTTATTATAACAAATTCAAGGACTTGTCTCAAGCACCTGTGCCCCCTACTTAGGCGCCCTCTTTATCACCAGCGCGCTCCACAAAAGAATAACCAGCCCAGTAATCACCCCTACTGCACGAAAGGAGAGAGAAGACCATCAGAGTTTCATGGCACCAAGCACAGAGACTTCACTCCGAGAGACAGAACTTCATTCCCAAAGTCAGTGTTTGCAGCCGGCAATGCCAGAAGAACTGCTGAGATTTTAAAGAGGAAATCGGGAGCGGATCAGGACCGGGATCAGGACCCGGACCAGGTCAGTACGGGTTCACTGAAAGGCCGGGCAGCTTTTACAGCTCAGATTCCTGATCGGGCTCTGAGCGTTTCAGAATGGAGAGATCTGAAAAGCAGCTCGTCCAGGCCGGAGCGCTTCGAGCTGAGGATGATGGAGGGAATGCTGGCTGACACTGAGGCTGACATCAGCGTCGCTAAATCTCTCCTCAACTACGTCGCTGCTGAAAACGGAACGCTGCCCTATGAACTGCTGCTCAAGTATCTGGCACTTTGTGTCTCTGGTGGCCATCACTCAGAAGTTTCCGACGTCTACGACATCATGAAGAGCTGCTTTAAGACTCTGGACACCGGAGCGTACAGTCTGTTCGTGAAAGGCCTGAGTCACACCGAGCGCTGGAGAGAAGCCCTGATCATCCTGGAAGACATTAAGAAGgtcatcacaccatcatccaGGAATTATGGTGATGCTGTGACCGGGGCTGTTCTCCATGGCGACAGGGAGACGGCGTGGCGTCTGTATGGTGAGCTGATGGATCAGGGACTGATGCCCAACCAGGAAACATGGCGGTGTTTATTTGAGAGTGGTGTGAGTCAGCGTGCACACAAAGACGAACTCCTGGCCATCTTGACCTACATGAGAGAAAACCAGATTTATCCGGAGGAGAAGTTGGTCAGAAGCATTAAAGCGTGGTTTGAAAGTTTACCAGATGAGAACTGGAGAGGGAAGTTTACTTCTGTGGACCCCGGAGGAGTGTGTCGGAGCTGTGGGACAGAGCTGGAGTCCATCCAGCTGACGGAGGAGGAGTACAATCAGCTAAAACACAGAGTGATGGAGGACGTGATCGAGGGCCGGGACGTCTTCAATAAGACCACGCCTGAGGAGCTGGAGAGTTTTAAGAGCTTTGTGCAGAAAAGACCTGCGTTTGATGTGGTGATCGACGGCCTGAACGTAGCGAACATCACACccaagtgtgtaaaatcagagACGcTGTTGGCGGTGGTCTCAGCACTTCAGGGTCTGAATGTTCTGGTTCTGGgcagaaaacacatgcagcAGCCGTCACGTAACTGGAACAGACACGACATGAACCAGATCAAACAGAAAGCACACTGCTTCTTCACTGAGAACAtCTCGGAGGACGACCCGTTCCTGCTCTacgctgcattgcattctgggaacCACTGTAACTTTGTGAGCCGGGACCTGATGAGGGATCACAAGGCGTGTCTCCCGGACAGCGCCACACGACGCCTCTTCTTCAAGTGGCAGCGAGGACATCAGCTCGTGCTCAGCAACTTCATCCCGGGGAAGAAGATCCGCTTTCAGaggaCGTCACGCTATGATACGATAGTCCAGAGTCATGGAAAGACGTGGCACGTACCCTACGATGAGGACGGAGGAGAGCGGAGCACGTATGAAGTTCCACAGAGGTGGCTGTGTCTCAGTAATGACGTGTGA

Function

GO: NA

KEGG:

id description
K17655 MRPP3; mitochondrial ribonuclease P protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026925996.2 True 2440 mRNA 0.48 7 28742067 28759394
XM_026925997.2 False 1845 mRNA 0.52 8 28742052 28759129

Neighbor

gene id symbol gene type direction distance location
fam177a1 fam177a1 coding upstream 6162 28730429 ~ 28735890 (+)
ctage5 ctage5 coding upstream 25365 28694978 ~ 28716687 (+)
LOC117598320 NA coding upstream 264807 28441002 ~ 28477245 (+)
jkamp jkamp,LOC107693092,LOC107564966,LOC107751812 coding upstream 516398 28217692 ~ 28225654 (+)
daam1a daam1,daam1a,LOC108269704,LOC107725326,LOC107751774,LOC107693144,LOC107679992 coding upstream 533190 28181100 ~ 28208862 (+)
psma6a psma6,psma6a,LOC107729267,LOC107586679,LOC103457804,LOC107725920 coding downstream 471 28759865 ~ 28764015 (+)
LOC113533718 insm2 coding downstream 33445 28792839 ~ 28796775 (+)
il17a/f1 LOC108269793 coding downstream 136498 28895892 ~ 28898603 (+)
emilin1b emilin1,LOC107693157,LOC107729260 coding downstream 208737 28968131 ~ 28983869 (+)
ankef1b LOC108269963 coding downstream 237630 28997024 ~ 29006766 (+)
G173106 NA non-coding upstream 210361 28531459 ~ 28531691 (+)
LOC117598375 NA non-coding upstream 306654 28389196 ~ 28435398 (+)
LOC113534053 NA non-coding upstream 497326 28236673 ~ 28244726 (+)
G172873 NA non-coding upstream 550140 28148577 ~ 28191912 (+)
G172830 NA non-coding upstream 619220 28119062 ~ 28122832 (+)
G173140 nfkbia non-coding downstream 10631 28770025 ~ 28772065 (+)
G173143 NA non-coding downstream 38773 28798167 ~ 28807149 (+)
G173154 ralgapa1,LOC108414275,LOC107729238,LOC107589631,LOC107586611 non-coding downstream 61106 28820500 ~ 28825365 (+)
G173156 NA non-coding downstream 72952 28832346 ~ 28864098 (+)
G173198 NA non-coding downstream 154698 28914092 ~ 28973429 (+)
LOC113533782 cldn20,LOC108269830,LOC107573130,LOC107675320,LOC107571061,LOC101886267,LOC107728965,LOC108443299 other upstream 670971 28028000 ~ 28071081 (+)
trnak-uuu_7 NA other upstream 1016773 27725207 ~ 27725279 (+)
nrxn3a nrxn3,LOC107583487 other upstream 1274486 27156343 ~ 27467566 (+)
LOC113534148 NA other upstream 3311123 25426891 ~ 25430929 (+)
samd4a samd4a other upstream 3423775 25258811 ~ 25318277 (+)
brms1la brms1l,brms1la,LOC107682295,LOC107693096 other downstream 102068 28861462 ~ 28935700 (+)
kif28 kif28p,LOC108270380 other downstream 294839 29054233 ~ 29138878 (+)
G173221 mrpl57 other downstream 310326 29069720 ~ 29073089 (+)
nrde2 NA other downstream 334070 29093464 ~ 29138776 (+)

Expression


Co-expression Network