ak7b (LOC108269780)


Basic Information

Item Value
gene id ak7b
gene name LOC108269780
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 26349862 ~ 26360091 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026926082.2
CTCCCAGCTCTAGTTGCGAAGCAAcacaacctaaaaaaaaacaatatggctGCAGAAACTGAGGAACTCTCCCACCTCTCTAAACGCGTTTTTATCAATAATGTGGACAAATATACCTCAAAATATATCGCAGAGTTTTTGTCCTCGTGTGCTGCTGGAGCGTCCCGTGTTGCTGAACAAGTCGAGGATGAAGAGGAAAACGAATCATCCCAGAAAGGCACTTTCCGGATTGTTGGAACCGTTTCTGGGAAAACCGAGGAAAAGTCCAGTTTTGCAGTCGAAGAATATACTAACTTAACACGTGAAGAGCTTTTCCATCACCTGATGGAGTCGGATGTCGTCGTTTATAACATTAACAGCGAGCATGCTGATCAGATAGACGAAGCCTCTTGGGCGGTCTCAGcTCTTCACAAAGAAATCGATGCATTTCCTGGACCCAAGATGTTCATCTTAATCTCCTCGGTCATGACGTGGGCTCTGACTAAGACCCTTGATCCAAACGATCCAGAGATTTCTTTTACGGAAGAGGACTACAGGAGACGGAAACCGCATCCCAACTTTAAGGATCATATCTCTGTGGAGAAGCTTGTGGTTAAACTGGGAAAATCTAATCCGTCACAGTTCTCTACTTATGTGGTTGCATCTGGACTGCAATATGGAAAGGGAGAGCAAgcgtttcatttctttttcaagACATCGTGGCTGGGAGAGGAACGCGAAGTGCCGATCTTCGGAGACGGCTCCAATATCATTCCTGCTATTCACATCAGTGATCTGGCAGGgaTTGTACAGAATGTAATCGACCGTAAGCCGAAGCCGCAGTACTTTCTTGCAGTGGATGAATCACAGAATACCATTGCTGACATTATCAGCGCAATAGCGTTGGTGCTCGGGTCAggaaaaacccaaaacattcCAGAAGAGGACGCATTTTTCATAGAAGAATTGACACAAGCAGAAATTGATCGTTTGTTCATCAACCTTCGAATGGAAGCCATTTTTTTCACAGACAATTTCAGTATCAACTGGGTTTCAAAGAGAGGCATTGTTGATAACATCGACCAAGTCGTGGAGGAATACAAGCTCACCCGAGGCCTGCTGcctgttCGCATCTGTGTCTTGGGACCTCCTGCTGTCGGGAAAAGCACCATAGCTGAAAAGATCTGCAAGCACTACAAACTGCACCATGTAAAACTCAAAGAGACCATCACTGAGACTCTCGCGAACCTGGAGTCGCGTGTCCGCATAGAAGAAAGCAACGAGGACGATGAATCACATGAAGCACAGGAGCTTTTGGAGACACTGAAGAAGAACATCGAAGAAAACGGAGGCCGGTTGGATGGGCAGTATGTTATCCAAATCATGAAGGACAAGCTGAAGACTAAACCATGTAGAAATCAAGGATTCGTCCTGGACGGCTTTCCGAAGACATACAAGCAAGCTAAAGAGCTATTTTATGCCGAGGATGACAAAGCTACAGACGCGAGGTCCAATGTCAAAATCATCCCAGagtttgtGTTCTCTCTGGATGCCACTGACGAGTTCCTGAAGGAACGTGTGCTGAACCTGCCTGAGAGCGTGGTGCAGGGAACGTCACACTCCTTCGATAACTTTCTCCCACGTCTGGCCACGTTCAGAAAAAACAATTCAGAGGACGAAATTGTGCTAAACTACTTTGAAGAGCTGCTGATTCACCCTGAGCATATAGAGATCAACACTGATGACCCAGAGAATGTTCTGGTGATGGAGAAGGTCAGTGAGATTGTGGGGAAGGTCAGGAACTACGGCCCCACTGCAAAGCATTTAGAGGAGGAGCGGAGGCAGGCGGAGATCAGGctgagggaggaagaggaggcacGCCGGGCCGAAGCCAAGCgcagagaggaggaagaggaggagcagaGAGCACAGTGCTGGGAGGAATggaaccGACGCCTCCAAGACGTGAAGCAGCAGGAAGAGGagctgttgatgagagaagaagaatcTGCCAGGCAGTATCTGATGTACACTGTGATGCCCGTTCTGTCTCAAGGCCTGATTGAGTTGTGCAGAATCCGACCAAATGATGCAATAGACTTCCTGGCTGAGTATCTCCTCAACAACAACCCAGAAATGGAATAAAGCACATCCGCCTAAAGGATAATTGTggtataagacaaataaaatgctACAAGACACGATGTTTTAGGAAATAAGTGACTTCCAGGTGccaacagtaactccgcttcacatcTGGCCGTttcacaccaccccgttgttgattgtttttctataacagcatgccccattgtgCTCTAATTGCACGTTCATTATAGTCAGGGAAAGCTGATTGTAAACTTTCTCGTTTCTGACCTTGCTGTTTGTGTACCTGTCCGTTTAAAAGCTTCCGAAACCGACAATAAAAGCCAGCTGCTAATTAAAAGTTCATTAACGATAATGTATTTGGGAGTGCTTGATAACTAGAAAAGTAGACATGGCACTGCATAATTGCCTTGATTTGCCGTACAGTTTCAAAGGATCGATGTAACAAATGGCggataattaaaatattttcatacgCAAGTCGGAGAGcagaaaattaattacattGGTAAACAAAAATTATTCCATTTCTGCAAACATTCATTCAGTTCATTGTTTCAGGAAGTTGTTAGTTCACAGCGCTGAATGTGCTAATAAACTTAAGTCATTATTAA
>XM_026926083.2
CTCCCAGCTCTAGTTGCGAAGCAAcacaacctaaaaaaaaacaatatggctGCAGAAACTGAGGAACTCTCCCACCTCTCTAAACGCGTTTTTATCAATAATGTGGACAAATATACCTCAAAATATATCGCAGAGTTTTTGTCCTCGTGTGCTGCTGGAGCGTCCCGTGTTGCTGAACAAGTCGAGGATGAAGAGGAAAACGAATCATCCCAGAAAGGCACTTTCCGGATTGTTGGAACCGTTTCTGGGAAAACCGAGGAAAAGTCCAGTTTTGCAGTCGAAGAATATACTAACTTAACACGTGAAGAGCTTTTCCATCACCTGATGGAGTCGGATGTCGTCGTTTATAACATTAACAGCGAGCATGCTGATCAGATAGACGAAGCCTCTTGGGCGGTCTCAGcTCTTCACAAAGAAATCGATGCATTTCCTGGACCCAAGATGTTCATCTTAATCTCCTCGGTCATGACGTGGGCTCTGACTAAGACCCTTGATCCAAACGATCCAGAGATTTCTTTTACGGAAGAGGACTACAGGAGACGGAAACCGCATCCCAACTTTAAGGATCATATCTCTGTGGAGAAGCTTGTGGTTAAACTGGGAAAATCTAATCCGTCACAGTTCTCTACTTATGTGGTTGCATCTGGACTGCAATATGGAAAGGGAGAGCAAgcgtttcatttctttttcaagACATCGTGGCTGGGAGAGGAACGCGAAGTGCCGATCTTCGGAGACGGCTCCAATATCATTCCTGCTATTCACATCAGTGATCTGGCAGGgaTTGTACAGAATGTAATCGACCGTAAGCCGAAGCCGCAGTACTTTCTTGCAGTGGATGAATCACAGAATACCATTGCTGACATTATCAGCGCAATAGCGTTGGTGCTCGGGTCAggaaaaacccaaaacattcCAGAAGAGGACGCATTTTTCATAGAAGAATTGACACAAGCAGAAATTGATCGTTTGTTCATCAACCTTCGAATGGAAGCCATTTTTTTCACAGACAATTTCAGTATCAACTGGGTTTCAAAGAGAGGCATTGTTGATAACATCGACCAAGTCGTGGAGGAATACAAGCTCACCCGAGGCCTGCTGcctgttCGCATCTGTGTCTTGGGACCTCCTGCTGTCGGGAAAAGCACCATAGCTGAAAAGATCTGCAAGCACTACAAACTGCACCATGTAAAACTCAAAGAGACCATCACTGAGACTCTCGCGAACCTGGAGTCGCGTGTCCGCATAGAAGAAAGCAACGAGGACGATGAATCACATGAAGCACAGGAGCTTTTGGAGACACTGAAGAAGAACATCGAAGAAAACGGAGGCCGGTTGGATGGGCAGTATGTTATCCAAATCATGAAGGACAAGCTGAAGACTAAACCATGTAGAAATCAAGGATTCGTCCTGGACGGCTTTCCGAAGACATACAAGCAAGCTAAAGAGCTATTTTATGCCGAGGATGACAAAGCTACAGACGCGAGGTCCAATGTCAAAATCATCCCAGagtttgtGTTCTCTCTGGATGCCACTGACGAGTTCCTGAAGGAACGTGTGCTGAACCTGCCTGAGAGCGTGGTGCAGGGAACGTCACACTCCTTCGATAACTTTCTCCCACGTCTGGCCACGTTCAGAAAAAACAATTCAGAGGACGAAATTGTGCTAAACTACTTTGAAGAGCTGCTGATTCACCCTGAGCATATAGAGATCAACACTGATGACCCAGAGAATGTTCTGGTGATGGAGAAGGTCAGTGAGATTGTGGGGAAGGTCAGGAACTACGGCCCCACTGCAAAGCATTTAGAGGAGGAGCGGAGGCAGGCGGAGATCAGGctgagggaggaagaggaggcacGCCGGGCCGAAGCCAAGCgcagagaggaggaagaggaggagcagaGAGCACAGTGCTGGGAGGAATggaaccGACGCCTCCAAGACGTGAAGCAGCAGGAAGAGGagctgttgatgagagaagaagaatcTGCCAGGCAGTATCTGATGTACACTGTGATGCCCGTTCTGTCTCAAGGCCTGATTGAGTTGTGCAGAATCCGACCAAATGATGCAATAGACTTCCTGGCTGAGTATCTCCTCAACAACAACCCAGAAATGGAATAAAGCACATCCGCCTAAAGGATAATTGTgGAAACGAACCCGGACGTGAGCAGT
>XM_034307840.1
CTCCCAGCTCTAGTTGCGAAGCAAcacaacctaaaaaaaaacaatatggctGCAGAAACTGAGGAACTCTCCCACCTCTCTAAACGCGTTTTTATCAATAATGTGGACAAATATACCTCAAAATATATCGCAGAGTTTTTGTCCTCGTGTGCTGCTGGAGCGTCCCGTGTTGCTGAACAAGTCGAGGATGAAGAGGAAAACGAATCATCCCAGAAAGGCACTTTCCGGATTGTTGGAACCGTTTCTGGGAAAACCGAGGAAAAGTCCAGTTTTGCAGTCGAAGAATATACTAACTTAACACGTGAAGAGCTTTTCCATCACCTGATGGAGTCGGATGTCGTCGTTTATAACATTAACAGCGAGCATGCTGATCAGATAGACGAAGCCTCTTGGGCGGTCTCAGcTCTTCACAAAGAAATCGATGCATTTCCTGGACCCAAGATGTTCATCTTAATCTCCTCGGTCATGACGTGGGCTCTGACTAAGACCCTTGATCCAAACGATCCAGAGATTTCTTTTACGGAAGAGGACTACAGGAGACGGAAACCGCATCCCAACTTTAAGGATCATATCTCTGTGGAGAAGCTTGTGGTTAAACTGGGAAAATCTAATCCGTCACAGTTCTCTACTTATGTGGTTGCATCTGGACTGCAATATGGAAAGGGAGAGCAAgcgtttcatttctttttcaagACATCGTGGCTGGGAGAGGAACGCGAAGTGCCGATCTTCGGAGACGGCTCCAATATCATTCCTGCTATTCACATCAGTGATCTGGCAGGgaTTGTACAGAATGTAATCGACCGTAAGCCGAAGCCGCAGTACTTTCTTGCAGTGGATGAATCACAGAATACCATTGCTGACATTATCAGCGCAATAGCGTTGGTGCTCGGGTCAggaaaaacccaaaacattcCAGAAGAGGACGCATTTTTCATAGAAGAATTGACACAAGCAGAAATTGATCGTTTGTTCATCAACCTTCGAATGGAAGCCATTTTTTTCACAGACAATTTCAGTATCAACTGGGTTTCAAAGAGAGGCATTGTTGATAACATCGACCAAGTCGTGGAGGAATACAAGCTCACCCGAGGCCTGCTGcctgttCGCATCTGTGTCTTGGGACCTCCTGCTGTCGGGAAAAGCACCATAGCTGAAAAGATCTGCAAGCACTACAAACTGCACCATGTAAAACTCAAAGAGACCATCACTGAGACTCTCGCGAACCTGGAGTCGCGTGTCCGCATAGAAGAAAGCAACGAGGACGATGAATCACATGAAGCACAGGAGCTTTTGGAGACACTGAAGAAGAACATCGAAGAAAACGGAGGCCGGTTGGATGGGCAGTATGTTATCCAAATCATGAAGGACAAGCTGAAGACTAAACCATGTAGAAATCAAGGATTCGTCCTGGACGGCTTTCCGAAGACATACAAGCAAGCTAAAGAGCTATTTTATGCCGAGGATGACAAAGCTACAGACGCGAGGTCCAATGTCAAAATCATCCCAGagtttgtGTTCTCTCTGGATGCCACTGACGAGTTCCTGAAGGAACGTGTGCTGAACCTGCCTGAGAGCGTGGTGCAGGGAACGTCACACTCCTTCGATAACTTTCTCCCACGTCTGGCCACGTTCAGAAAAAACAATTCAGAGGACGAAATTGTGCTAAACTACTTTGAAGAGCTGCTGATTCACCCTGAGCATATAGGTAGCACAGTTTTCTTTCAGTTCATGCTATGGGCAACAGAGGgctccaaaaataaaaaaaaagctcctaCTTTCTAGAGATCAACACTGATGACCCAGAGAATGTTCTGG
>XM_034307841.1
CTCCCAGCTCTAGTTGCGAAGCAAcacaacctaaaaaaaaacaatatggctGCAGAAACTGAGGAACTCTCCCACCTCTCTAAACGCGTTTTTATCAATAATGTGGACAAATATACCTCAAAATATATCGCAGAGTTTTTGTCCTCGTGTGCTGCTGGAGCGTCCCGTGTTGCTGAACAAGTCGAGGATGAAGAGGAAAACGAATCATCCCAGAAAGGCACTTTCCGGATTGTTGGAACCGTTTCTGGGAAAACCGAGGAAAAGTCCAGTTTTGCAGTCGAAGAATATACTAACTTAACACGTGAAGAGCTTTTCCATCACCTGATGGAGTCGGATGTCGTCGTTTATAACATTAACAGCGAGCATGCTGATCAGATAGACGAAGCCTCTTGGGCGGTCTCAGcTCTTCACAAAGAAATCGATGCATTTCCTGGACCCAAGATGTTCATCTTAATCTCCTCGGTCATGACGTGGGCTCTGACTAAGACCCTTGATCCAAACGATCCAGAGATTTCTTTTACGGAAGAGGACTACAGGAGACGGAAACCGCATCCCAACTTTAAGGATCATATCTCTGTGGAGAAGCTTGTGGTTAAACTGGGAAAATCTAATCCGTCACAGTTCTCTACTTATGTGGTTGCATCTGGACTGCAATATGGAAAGGGAGAGCAAgcgtttcatttctttttcaagACATCGTGGCTGGGAGAGGAACGCGAAGTGCCGATCTTCGGAGACGGCTCCAATATCATTCCTGCTATTCACATCAGTGATCTGGCAGGgaTTGTACAGAATGTAATCGACCGTAAGCCGAAGCCGCAGTACTTTCTTGCAGTGGATGAATCACAGAATACCATTGCTGACATTATCAGCGCAATAGCGTTGGTGCTCGGGTCAggaaaaacccaaaacattcCAGAAGAGGACGCATTTTTCATAGAAGAATTGACACAAGCAGAAATTGATCGTTTGTTCATCAACCTTCGAATGGAAGCCATTTTTTTCACAGACAATTTCAGTATCAACTGGGTTTCAAAGAGAGGCATTGTTGATAACATCGACCAAGTCGTGGAGGAATACAAGCTCACCCGAGGCCTGCTGcctgttCGCATCTGTGTCTTGGGACCTCCTGCTGTCGGGAAAAGCACCATAGCTGAAAAGATCTGCAAGCACTACAAACTGCACCATGTAAAACTCAAAGAGACCATCACTGAGACTCTCGCGAACCTGGAGTCGCGTGTCCGCATAGAAGAAAGCAACGAGGACGATGAATCACATGAAGCACAGGAGCTTTTGGAGACACTGAAGAAGAACATCGAAGAAAACGGAGGCCGGTTGGATGGGCAGTATGTTATCCAAATCATGAAGGACAAGCTGAAGACTAAACCATGTAGAAATCAAGGATTCGTCCTGGACGGCTTTCCGAAGACATACAAGCAAGCTAAAGAGCTATTTTATGCCGAGGATGACAAAGCTACAGACGCGAGGTCCAATGTCAAAATCATCCCAGagtttgtGTTCTCTCTGGATGCCACTGACGAGTTCCTGAAGGAACGTGTGCTGAACCTGCCTGAGAGCGTGGTGCAGGGAACGTCACACTCCTTCGATAACTTTCTCCCACGTCTGGCCACGTTCAGAAAAAACAATTCAGAGGACGAAATTGTGCTAAACTACTTTGAAGAGCTGCTGATTCACCCTGAGCATATAGTTCATGCTATGGGCAACAGAGGgctccaaaaataaaaaaaaagctcctaCTTTCTAGAGATCAACACTGATGACCCAGAGAATGTTCTGGTGATGGAGAAGGTCAGTGAGATTGTGGGGAAG

Function

NR:

description
adenylate kinase 7

GO: NA

KEGG:

id description
K00939 adk, AK; adenylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026926082.2 True 2699 mRNA 0.45 18 26349862 26357143
XM_026926083.2 False 2175 mRNA 0.47 19 26349862 26360091
XM_034307840.1 False 1818 mRNA 0.46 16 26349862 26354738
XM_034307841.1 False 1830 mRNA 0.46 16 26349862 26354770

Neighbor

gene id symbol gene type direction distance location
LOC113533735 amhr2 coding upstream 1522 26334822 ~ 26348340 (+)
galcb LOC108269778,LOC108444013,LOC107372531 coding upstream 15806 26323399 ~ 26334056 (+)
LOC113534080 NA coding upstream 37355 26307077 ~ 26312507 (+)
si:dkey-87k14.1 flrt2,LOC107583684,LOC107750877 coding upstream 131694 26213268 ~ 26218168 (+)
gsc gsc,LOC102791948,LOC101076325,LOC107578966 coding upstream 439556 25904043 ~ 25910306 (+)
vrk1 vrk1 coding downstream 45299 26405390 ~ 26419207 (+)
hhipl1 hhipl1,LOC107668615,LOC107740569,LOC103460662 coding downstream 543548 26903639 ~ 26914229 (+)
trnat-ugu_12 NA coding downstream 555267 26915358 ~ 26915430 (+)
slirp slirp,LOC107680761,LOC107588278,LOC107583681,LOC106611374 coding downstream 644018 27004109 ~ 27006749 (+)
adck1 adck1,LOC107740534,LOC107751735,LOC107680795,LOC107676278 coding downstream 647843 27007934 ~ 27125905 (+)
G171684 NA non-coding upstream 571130 25682394 ~ 25778732 (+)
G171647 col10a1a,LOC108270375,LOC108443413,LOC102306528,LOC102208108,LOC107680775,LOC107564946,LOC101475390,LOC100691618 non-coding upstream 757113 25587489 ~ 25592749 (+)
G171619 NA non-coding upstream 827173 25518116 ~ 25522689 (+)
G171523 NA non-coding upstream 960357 25389366 ~ 25389505 (+)
G171522 NA non-coding upstream 960696 25388772 ~ 25389166 (+)
LOC117598331 NA non-coding downstream 265849 26625940 ~ 26686726 (+)
G172052 NA non-coding downstream 429432 26789523 ~ 26789807 (+)
LOC117598329 setd3,LOC107588283,LOC107668608,LOC107583493 non-coding downstream 442965 26803056 ~ 26839478 (+)
G172099 NA non-coding downstream 507026 26867117 ~ 26960238 (+)
G172118 NA non-coding downstream 607241 26967332 ~ 26967536 (+)
LOC113534148 NA other upstream 918933 25426891 ~ 25430929 (+)
samd4a samd4a other upstream 1031585 25258811 ~ 25318277 (+)
LOC117598238 LOC108191637 other upstream 1171965 25176374 ~ 25177897 (+)
G171329 NA other upstream 1342096 25003983 ~ 25007766 (+)
cx28.6 LOC108269818,LOC108441857,LOC101482426,LOC102791942,LOC102199391,LOC100705227,LOC102313633,LOC107679991 other upstream 1349243 24994493 ~ 25000619 (+)
nrxn3a nrxn3,LOC107583487 other downstream 796252 27156343 ~ 27467566 (+)
trnak-uuu_7 NA other downstream 1365116 27725207 ~ 27725279 (+)
LOC113533782 cldn20,LOC108269830,LOC107573130,LOC107675320,LOC107571061,LOC101886267,LOC107728965,LOC108443299 other downstream 1667909 28028000 ~ 28071081 (+)
brms1la brms1l,brms1la,LOC107682295,LOC107693096 other downstream 2501371 28861462 ~ 28935700 (+)
kif28 kif28p,LOC108270380 other downstream 2694142 29054233 ~ 29138878 (+)

Expression


Co-expression Network