ero1a (ero1a,LOC107679999,LOC107693134,LOC107564954,LOC107583613)


Basic Information

Item Value
gene id ero1a
gene name ero1a,LOC107679999,LOC107693134,LOC107564954,LOC107583613
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 25240086 ~ 25252303 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026926785.2
AACAGGAAGTTAATGACACAACCCACTTTCACACGCACTCTTACACGCTCTCtttcacacctacacacactctatctctctctaacacacagaACACATCCTAAACTCCAGCTTACAAGCGAGAGCTTGAATTCAGACTTGTGTATTGAAGTGTGTAGCTCAGGGCAGCAcaatgagattattattattgtgtataaacttgagtgtgcttgtgtttcctgtttcagGCAGTATGGCGAACTCTGCTGCACACAGGTGTTTCTGCAAAGTCACCGGTAGTCTGGACGACTGCGCCTGCGATGTGGAAACAATCGATGGCTTCAACAACAAGAAGCTCTTCCCCCAACTTCAGAAACTCCTTTCGTCTGATTATTTCAGGTTCTATAAGGTGAATCTGAATAACCCATGTCCGTTCTGGAGGGACAGCAGCAACTGTGGTCTCAGAGACTGTGCCGTTAAACCCTGCAAACCTAATGAAGTACCCGAGGGGCTGAAAACCAGCAGCTACAAGTACTCATTAGAGGCCAGCCAGCACACAAAGGAGTGTGAAATGGCAGAGAAGCTGGGCGCTGTCAATATCTCTCTAAGTGATGAAACCCGGCAGGCTCTGCTCGACTGGAACCGGCACGATGACGAGGCCGACCGTTTCTGCATGCATGATGATGAAGACTCTCCGGATTCGCAGTATGTCGATCTCCTCCTCAACCCTGAGCGATACACTGGATATAAGGGTCCTGAGGCCTGGCAGATATGGAACAGTATATATGAAGAAAACTGTTTCAAACCGTATACAGTTAAACGACCACTGAACCCTCTGGTGTCGAGCAGTGGAGACAGTGAAGGAAGGGGATTCTACAAGTGGCTGGAAGGTCTGTGTGTGGAGAAAAGAGCGTTCTTCAGGCTCGTCTCAGGACTGCATGCGAGCATAAATGTGCACTTGAGTGCCAGGTACCTGTTGGATGATAACTGGTTTGAGAGGAAGTGGGGTCCCAACGTCACTGAGTTCCAGCTGAGATTTGATGAAGAACTGACAAAAGGAGAAGGACCCAAACGTCTGAGGAATCTCTACTTCCTCTATCTGATCGAGCTCCGTGCCCTGGCTAAAGTCCTGCCTTTCTTTGAGCGtccctccatccatctgtaCACAGGAGAGGCAGAACAAGACAAGCAGACTAAAGAGCTGCTCTTAGAGCTCCTCCATATGGCCAAGTCTTTCCCATTGCATTTTGATGAAACCACACTGTTTGCAGGCGATAAGACAGAAGCAGCAAAGCTAAAAGAAGACCTCAGGCTGACTTTTAAGAACATCTCTAGGATCATGGACTGCGTAGGATGCTACAAGTGTAGACTGTGGGGCAAACTGCAGACCCAGGGTTTAGGTACAGTTCTAAAGATCCTGTTCTCAGAGAAGCAAATTGAAACTCTTCCTCAGTCCAGCAACGCCAAACCGTCCTTCCAGCTGAGTCGGCAGGAGATCGTTTCCCTCTTCAACGCTTTCGGGAGaatctcAACAAGTATTCAAGAACTGGAAAACTTCCGGAAACTGTTATCAGAGCTCAAGCAATGAGGTGATCTCAGCCTGATGTTATTCCTTCGCGTGGATGAACAGCCTGCTATCTATCAACCAAGACATGTTTGACGTTCCAAGTTGGCTTCTTTAGTTTTCCACAGGAATTAGGAGGAGATtgtagctaccagtttagcacaTCAGGTATTTCAACCAGACTTGTTCATGTGCTTTCCGACACTGTATCACATATTAttatctataaaaatggacaaaaggatACCACAGAACTAAAAACAATACTAACGGCCATTTTGTATCTGAATCATGTTCTTTCTCAGCACATAGTTTGGTGTCACTTGGTGTTATGTCATTATAGGTCATTATGTCGTTTTAGGCGTGCTTAGGTGTGATGCTTTAGGCAGGCAAATTGGTAGCTATAAGCTTTCTTGTTTAGCTATATTAGCTACAGAAGAAAACTTTCAaccaccaaacatgtcttggttgATTATAATAGGAGtaacaagaaatgaaaaaaaaaaaaatcatttttgccCAAACTGTTCATTTAAGCTCGACTCAGGAAGTGTGGTTGAAGATCATGAGAAACTTTACAGCCCAAAGAGAAAGTCTCAATGCCAATGAGATGTCCTTGAGGTATGAGATTTGGCAATACAGATGCCCCTAAACAAACCGAGCACTTTAATGACTGAGGATTAAATTTAGCATTTAGCACAATTTGCACTATGGCATATCTGAGGAatgtatttaacaaagaagTTTGGAGCGAAAATAAGAATTAGGACTACTCCCACataggattgttttttttctcagggaTTTAAAAGTCAAAATTTCAGAATCAATTAGACAATAATGTGGAAAATAGGCTTGTCGTTCTTGAGTCAGGTACTACTGATGAATAAGGATCATTTTTGGATGATTCTTCTATTGCATACAGTTGTTAAAACTATTGGTTTTTGCATTTCGTTTTGTATCTTGCATCACAATACTTGTCCATAGTTCACATTAGGTATCGTGATATTTAGTTGTATGTTAGAACAGATACgtcatctttaaaaaaagtacGTAAAGCATTACAAcatgaaacaggaaaaaaaataaattaaatagtaaatacatttacatatacatgcatacaGATGATGTGAGAAAACtgtattttgacttttttgtgATGGTAATATATTGTCTTATCGCCTGTGGTTCAGTAGGTTTacggatttttcttttttttctaccacAATTTGACAACAGCcatgtaaatgtgttcattccttaataaaaattatttacatgca

Function

symbol description
ero1a Predicted to enable protein disulfide isomerase activity and protein-disulfide reductase activity. Predicted to be involved in protein folding in endoplasmic reticulum. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human ERO1A (endoplasmic reticulum oxidoreductase 1 alpha).

NR:

description
ERO1-like protein alpha isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0006810 transport biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0003756 protein disulfide isomerase activity molecular_function
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor molecular_function

KEGG:

id description
K10950 ERO1L; ERO1-like protein alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026926785.2 True 2829 mRNA 0.42 16 25240086 25252303

Neighbor

gene id symbol gene type direction distance location
txndc16 txndc16 coding downstream 33613 25182416 ~ 25206473 (-)
nid2a nid2,wu:fb77a09 coding downstream 133327 25056364 ~ 25106759 (-)
si:ch211-266o15.1 LOC108269816 coding downstream 193300 25009783 ~ 25046786 (-)
cep295 LOC108269817 coding downstream 248258 24974039 ~ 24991828 (-)
tmem30b LOC108269804 coding downstream 777150 24454401 ~ 24462936 (-)
gch1 gch1,LOC107583460,LOC107564951,LOC107693131,LOC107723641,LOC107751761,LOC107680005 coding upstream 68207 25320510 ~ 25335259 (-)
wdhd1 wdhd1,LOC107583614 coding upstream 84243 25336546 ~ 25361861 (-)
socs4 socs4,LOC108270091,LOC107564995 coding upstream 117202 25369505 ~ 25371805 (-)
styx styx,LOC107723651,LOC107680756,LOC107693126 coding upstream 137628 25389931 ~ 25396747 (-)
ros1 NA coding upstream 145787 25398090 ~ 25418463 (-)
G171381 NA non-coding downstream 230697 25008099 ~ 25009389 (-)
G171257 NA non-coding downstream 324936 24783017 ~ 24915150 (-)
G171260 NA non-coding downstream 417865 24813178 ~ 24822221 (-)
G171258 NA non-coding downstream 439023 24766910 ~ 24801063 (-)
G171232 NA non-coding downstream 584833 24598275 ~ 24655253 (-)
G171542 NA non-coding upstream 9305 25261608 ~ 25262527 (-)
G171545 NA non-coding upstream 12065 25264368 ~ 25265970 (-)
G171543 NA non-coding upstream 15599 25267902 ~ 25271762 (-)
G171572 NA non-coding upstream 33739 25286042 ~ 25286781 (-)
G171570 NA non-coding upstream 34849 25287152 ~ 25289502 (-)
G171256 NA other downstream 313862 24781282 ~ 24926224 (-)
luzp1 luzp1 other downstream 696007 24490238 ~ 24544079 (-)
greb1 greb1 other downstream 2060575 23148743 ~ 23179511 (-)
G170435 NA other downstream 2376319 22855494 ~ 22863767 (-)
G170023 NA other downstream 3124210 22115565 ~ 22115876 (-)
G171569 NA other upstream 6536 25258839 ~ 25259362 (-)
G171734 NA other upstream 326636 25578939 ~ 25582527 (-)
foxn3 foxn3,LOC107583483,LOC107755777,LOC107751738,LOC107693108,LOC107680774 other upstream 2312955 27565258 ~ 27652301 (-)
efcab11 efcab11 other upstream 2419320 27671623 ~ 27725757 (-)
si:ch73-204p21.2 NA other upstream 2647179 27899482 ~ 27910890 (-)

Expression


Co-expression Network