tmem62 (tmem62,LOC103132791)


Basic Information

Item Value
gene id tmem62
gene name tmem62,LOC103132791
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 16907722 ~ 16922047 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026933876.2
TTTGCGCAGAGTGAAGCGTCTCGACAGCGCGTGACGATCTGTGGCCTCAGTTTAAAAATCCAGAAAGGCGGAAGTGTGAGCTGTAAGCGGTGATGACAGCGCGGTTATTTGTCCTATCGTGTGCTCTGTCTGTTCGTCTCCCCGCCACTGAACAGCGCAGGATTTTGGGGTTGCAGCTGTTAAGCAGTGAGCGGAGAGAGGCCATGGCCAGTGCTCCGGGGGGTCTCCAGGACAGGGTTTGACGTGTGCTCGCTCTGTGCAGGAACACCGCTGCTGTCAGGATGCTACGACTGTTTGTTGTCCTGCTTGTTACCGGCTTGGTGCTGGCGTGTTTTACTTCCTGGGTGCTGGATAGCTACGACACCACCTGGCACCCTAAACGGAGTTTAGCGCAGTCAGACGGAGAACATGttaggaagaaaagagaggaaccTTTTCCAGGCGCAGAGCTGCAGAACATCTTCTGGTTTGTGCAGGTATCAGACATTCATATAAGTCGCTTCCGTGATCCGAGACGTGTCCCAGACTTCGAAAGGTTCTGTACAGACACTGTTGAGGTCATTAAACCAGCTCTTGTACTTGCCACAGGGGACTTAACAGATGCAAAGACAGAGAATAAAGTTGGCTCTCTTCAGCATGAGGTGGAGTGGCAGGCCTATCACAACGTCCTAAAGAAATCTCGAGTGCTGGAGCGCACAAAATGGATAGACATTCGTGGAAACCATGATGCCTTCAATATTATTTCTCCGGATAGTGTAAACAATTATTACAGGAAGTATTCTGCCAACCAGAAGCTTGGCTCCTTCCACTATGTACACAGCACTCCCTTTGGGAACTATTCATTTATCTGTGTTGATGCCACCCTCACCCCTGGGCCTAAGCGTCCCTACAACTTCTTTGGAATACTTAATCAGAGTCAAATTGACATGCTGGCCACCTTTAGGCAGGAGAGTCAGAGCAGCAATCAGACCATCTGGTTTGGACACTACACCACCTCCACTGTCATCTCCCCTTCACCAGGGGTCAGAGCCCTGATGAGCATGGCAGTGGCGTACCTGTGTGGGCACCTGCACACGCTGGGGGGTCTGATGCCTGTCCTCCACAGCAGACACTCAACGGGAAcactggagctggagctgggaGACTGGATGGACAACCGCAGATACAGGATCCTGGCCTTTGACCACGATCTCTTGAGTTTCTCGGACCTGACATTTGAGGACTGGCCAGCAGTGGTCATCACCAACCCCAAAGATGCTCAGTACCTGCATCCAGGAATGGAGCCTGTGGGTCGCATCTACAGCTCCACACACATCAGGATCCTGGTCTTTTCAGCAGCTCCAGTTACAGCAGTGTATGTGAATGTGGATGGAGAGTTCTTGGGGAAAGCAGAGCGTGTAGGGGGACCTCTGTATGTGCTGCGCTGGGATCCCAAAGCCTACTCCACTGGACTGCATACCATTACAGTCAAAGCAGAGAATTTGGCAGGTCAGACCAAGGTGCAAGAGCAACTTTTTACCATGCAGGAGGACCTCACACCCAGCTTTGGCTTCCTACAGTCTTTCATCCTCCTCACTGACCACTACATcctggcaCGGATCGCTTTTGTAGCTGTCGTGTTGCTGAATGTGGGCGTCCTTGTTGCCTTCAGATTCTGGCACATGCCCGCTGCCCGAGGGTTTCGCTCTCAAGCATTTATGTCCCTGCACCTTGTCAGCAAGATCGATGCTTTCTACTACACCTTGCTGCTGTTTAATCTGTGTACAGCATTAGGTCCATGGTTCGTTGGGGAGGTAATTGATGGACACAGTGGAGCTTGCTTTGCTTTCGGTGTGTTGGTGGATGGGCATTTTCTTGAGGGCAGTCTGACCTATGTTGTGGGTGTGATGCAGTTGATCTTCTTCAACATGCCTCTGACATGCTACCTCTGCTGGAGCCTGCACCAGCGCTTCAGCGGCTGCTCCTTCCGCTCTCACTTCTGCAGGCTGGGATACCGCTGGAGTACTCTGGCTGTACACGTGGTCATGCTGCTTCTCTTCATCTGGCAGGCATACTCCTGCTACTTCCTGCTGGAGACCTACGGCCTTTTGGCTTTCTTCCTGTCTCCGGTGCGTACCTGGGCTCTGCTGATGGGTCTGCTGCTCATCTACAAGGTCTGGAGGGGACCAGCTCCAAATCTCACTAACAAGAGCAACTCACAGCTATGACAACTAAACTGACCAGTTTTTCAGACACAGTTTTcaatattttactgttatacATATTTGTGTGCCAAATTCTCccctctctatctttctgtacAATCACTATACAATACAATCATAATAGGAGAGCTGGAGAGATGTACTACTTAAGCAAGGGCAGGTTGGGCCATTTACTTTAACACTGTTCTTGGGCCActgttcttgttctttttcAGTAGATTACACTGAAGTATTCCAGCAATTCAACACTGATAGTTGTGACTgccagactaaaaaaaaaacgtgatcAATTACATAAAATCCCGATTTGTGGATGAGCACTGAGACCCTCTGACTTGCATAATCAGTTGACAACCACTCGCAATATAATTTGTTTCATTAAGAGAGCAAtagtttggtttaaaaaaaaaaagtagcaagTTTGGTTCTGCTACTTGGACATATTGATGTCAGCATTGAGGTTGTTAAagtcttttttctgtttattcacATGCCTTCCTGCACCAAATACAAAcagtttattcagaatgaacagatattatGTTCTAAACATGTACAAATACAGACACGAATAGGAGactcactattattattattttttattttcataaagaaagtttgccagaaaggttcacatggCATCAAGTTGAGACTAGATGTGTGCATTGGGACTGTGATCCCAAGAAAAGGCAATCCCAGTGGGAAGTTTCACTTTCATACTGCcgagcattcattcattcattcattcattcattcattgttagtaactgcctggtcagggttgcgatggtttaaattaggcttcCAGTTTATTTAGGCttatattttgcaaaatagAACAACAGACCAactaaatttattagaaaatgttgtaggcagGTTCAAACAAAATAATACCTCTATTTGACACTCTATTTCTCTAGGTCAAAAAAACACCACGCCCACTTTAAAtctaaatacagatacaaatgtttggagcactaaacagagaCATATAGTGGATTATATTACACCCCTATGTTGTACCTATAAATACAGAAACCTAATGTCTAACACTGAGAGTTTGACTTGCTCTTATCGTTTCTGCCTTGATCAAATTTCATCACCAATTGTGCAGGCTCATCAGAACATGctgattgtttgttttgtctattTGGTGAGTCACAGTTTGTGGAGGAGTATATAGAGTAACCTCATGAGATAGCTTTTATATTAGACTAGCAAAGGACAGACGGGCTTTTATGGAGAAGGTATGAGTGCCGGAGCTGTATCCTAGACATACTACAActatatgctttatttattgtattacacTGGCAAGAGACCACTGATCTCACTAAACACAAACCACTGTTTTAGTAAATAAGCGTGAGGATAAACTGTACGTAGGATAGCTTCGTGGGATTAAGTTGCAGGAAAAGACAATCGCCACTGTGTGTATACACTATAGCTCATTAAAATATAAGCTCACTGAAGTtccagggatttttttttttttagcttctcATTCTGTACTTCAGCTGGATATGATAAACACAGATTGCAAACTAGGGAAACAATCCATGCAACACAATCAATGCATAACAATCATGTTGTTGTACAGAAGGAACTAAAAGTAGAGAGAATATTAGTGTTCATGTTGaatatgtttttctgtttaatccacaaaaatgttgtttttttcagtctacTTCATATGTTGCTGTGATAAATTTGCAGTGGTagattgttttgtgtgtttttgttgaatTGTGTTTGATTACCTGTAGCTCAGTTAAGATCTCTTGGGAACATAAAGACTTCAATACTTGGCTGCTCTGGATGATCTATCAACAATGTGAAGGGTTTCAAAtggtttcttttttgcttttgggTTCATTCAGACCAATAACTCAATATTTGTTCATTAACAGTTGTGGTGAAGTGAcatatttcttgaaaaaaaatgatttgaaataatatacttttataattattttatgcatattgattttattgttttttagtACTGTGTTGTTGCCCATTACCTTGTATGTAGTACAACTTTGACGTTCCTTGAATGCTAAAGATTGCTGCTCAACTAATGGAAACTTAATTACACACTGATAGGTGAACAAGTTATTGTGCTCACTGGTCAGTCAGAATGCAAGTGATGACTTAAAGATCATTTGTTCTTAGAAAATTTGCTTTTctgacaaaataaacaaaaaagaaa

Function

symbol description
tmem62 Predicted to enable hydrolase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human TMEM62 (transmembrane protein 62).

NR:

description
transmembrane protein 62

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026933876.2 True 4419 mRNA 0.43 14 16907722 16922047

Neighbor

gene id symbol gene type direction distance location
mta1 mta1,LOC107679789,LOC107666257 coding downstream 96506 16776703 ~ 16811216 (-)
tmem229b tmem229b,LOC107752730,LOC107679790,LOC107594722,LOC107578043,LOC107666241,LOC107708331 coding downstream 132146 16761588 ~ 16775576 (-)
plekhh1 LOC108270359,LOC108425659,LOC107679799,LOC107752725,LOC107741858 coding downstream 250352 16626955 ~ 16657370 (-)
slc25a21 slc25a21,LOC107679800 coding downstream 287321 16540840 ~ 16620401 (-)
nkx2.9 nkx2-8 coding downstream 392542 16513235 ~ 16515180 (-)
hadhab hadha,LOC100304971,LOC103035446,LOC108425650,LOC102203549,LOC107594700,LOC102787580,LOC107752738 coding upstream 6798 16928845 ~ 16937439 (-)
slc30a1b LOC108269644,LOC105895753 coding upstream 18580 16940627 ~ 16953297 (-)
impg1b LOC108270397 coding upstream 213431 17135478 ~ 17155642 (-)
iah1 iah1 coding upstream 772733 17694780 ~ 17699650 (-)
asap2a asap2 coding upstream 786571 17708618 ~ 17781052 (-)
LOC113538645 NA non-coding downstream 42295 16839081 ~ 16865427 (-)
G166865 NA non-coding downstream 162900 16744606 ~ 16744822 (-)
G166633 NA non-coding downstream 461717 16444841 ~ 16446005 (-)
G166484 NA non-coding downstream 640207 16267229 ~ 16267515 (-)
G166390 NA non-coding downstream 907210 16000219 ~ 16000512 (-)
G166967 NA non-coding upstream 3229 16925276 ~ 16928196 (-)
G167011 NA non-coding upstream 45409 16967456 ~ 16969965 (-)
G167007 NA non-coding upstream 130437 17052484 ~ 17055548 (-)
LOC117598293 NA non-coding upstream 154935 17076982 ~ 17088776 (-)
G167079 myo6b,LOC108269576,LOC107666253 non-coding upstream 202458 17124505 ~ 17125588 (-)
mideasb elmsan1 other downstream 8992 16873279 ~ 16898730 (-)
eml5 eml5,LOC108435760 other downstream 1145004 15715560 ~ 15762718 (-)
ktn1 ktn1,LOC107668535 other downstream 1244227 15633002 ~ 15663495 (-)
pgfb pgf,LOC108435746 other downstream 1585671 15303235 ~ 15322051 (-)
capn3a capn3,LOC108269768,LOC108435782 other downstream 1790358 15107120 ~ 15117364 (-)
htr1b htr1e,LOC108269541 other upstream 244821 17166868 ~ 17247823 (-)
cmpk2 cmpk2 other upstream 693691 17615738 ~ 17624534 (-)
G167566 apob other upstream 1383696 18305743 ~ 18316207 (-)
gdf7 LOC108270114 other upstream 1453356 18375403 ~ 18382455 (-)
bahd1 bahd1,LOC108436768 other upstream 1678248 18600295 ~ 18642889 (-)

Expression


Co-expression Network