capn3a (capn3,LOC108269768,LOC108435782)


Basic Information

Item Value
gene id capn3a
gene name capn3,LOC108269768,LOC108435782
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 15107120 ~ 15117364 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026934051.2
GTTTAGAGAGCTTGAATGCCTTCTGCTGAGGCAGGCCATCCCACTACTCTTTGCAGCTCCGCTCGTCTTTCAATGATGGAGCACCGGTGTTCATTGTTCTCCAGCCAATGGGAATGGTCCAAAAGACTTTAGCtatgtgtatgcatatgtgCATGCATGGCACACATGTGGCATGAAAGTCTTTTGCCTCAAACCCTGACCTCCACTCCATGACCAGGTGAAGTGGGCGTCATTTAGCaggacagccaatcagaggtcAGCGCTTTGGATTTATGCCAGGGATTTTGGACTTCTAAGGCCTAAACGTTGTTGGCCAAAGGCTGTTTTTACAACACCAAATAAACATCTTTGTGAGACAAGATGCCCTACACACCATCAGGCTTTTTTTGTGACCGGCTGAtccgggagagagagagaaaggatggAGAAGGATCTGTGAACAAACCTCTTCGATTCAGTGGCCAGGACTTTAACGCCCTGAAACAGGATTGTCTTAAGAAAAAGGTGCTGTTTGAGGATGATACCTTCCCAGCCAATGTGGAGTCCCTGGGTTACAAGGAACTGGGCCCCAAGTCCAACAAGGTCAAGAACATTGTCTGGAAAAGACCCAAGGATATTTGTGATAATCCACAGTTCATCGTTGGAGGTGCCAGCAGAACAGACATCTGTCAGGGAGACTTGGGAGACTGCTGGCTGCTTGCTGCCATTGCTTGTCTTACGCTGAACGATAAGCTACTGTATCGGGTTGTTCCTCAAGAGCAGAGTTTCTCTGACAATTATGCGGGAATCTTTCATTTTCAGTTCTGGCGTTACGGTGACTGGGTGGATGTTGTGGTTGATGATCGGATCCCTACCATCAATAACCAGCTGGTGTTCACCAAATCTGCTGAGAGGAATGAGTTCTGGAGCGTACTTCTTGAGAAAGCTTATGCCAAACTGCATGGTTCTTATGAGGCTCTGAAAGGTGGAAACACTGCCGAGGGGATGGAAGACTTCACTGGAGGAGTAACTGAGTTTTATGAAATGAAGGAGGCACCCAAAGACCTTTACAAGATCATGAAGAAGGCCTTGGAGCGAGGCTCCCTTATGGGTTGCTCTATTGATGCCTTGGTCCCAGCCCGCTTGGAGACTCGCACCACGACTGGGCTAGTGAAAGGTCATGCCTATTCTGTAACTGCTGTGGAGGAGTGTAAACAGAGCGCACAAAAAGAATCTAAAGTGCGTCTGGTGCGTCTCCGTAATCCGTGGGGCCAAGTGGAGTGGAACGGACCTTGGAGTGATAATTCAAAGGAGTGGGCTACCATTTctaaggaagagaaagaaaacctgCATCTACAGAATGCAGAAGATGGAGAGTTCTGgATGTCCTTTGCTGATTTCACGAAGAACTACACCAAGCTGGAAATCTGTAACCTGACCCCTGATGCTCTGGATGATGATAAGCTCCACAAGTGGACAGTGTCTGTGAATGAGGGGCGCTGGGTAAAAGGCTGCTCTGCTGGAGGCTGCAGGAATTATACTGaCACCTTTTGGACAAACCCACAGTATCGCCTTCGCCTCCTTGAGGAGGATGACGACCCGGACAACAGTGAGGTGGCCTGCTCCTTTGTGGTGGCTCTCatgcagaaaaacagaagaaaagaacgCAAACTGGGTGCCAATTTATTCACTATTGGATTTTCCATCTATGAGGTGCCAAAGGAGaTGCATGGTAACAAGCAGCACATGCAGAAGGAATTCTTCCTGCTGAACTCAACCAAGGCTCGCTGCAAGGCCTACATTAACTTGCGGGAGGTGACTCAACGCTTCAGGCTGAGCCCTGGGGAGTATGTCATTGTGCCTTCCACCTATGAGCCCCACCAGGAAGGCGAGTTTCTCCTCCGTGTCTTCTCTGAAAAGAAGAACATCTCTGAGGAAATAGAGAACAGGATCGAAGCTGACCATCCAGTGCCAGCTCCAGCCTCAGCAGGGGAAGAGACTGAGGAGGACCAGCAGTTCCGTACCATTTTTCAGCAGATAGCTGGGGATGAAATGGAGATCTCAGCCAACGAGCTGAGAAATGTCCTGAACAAGGTGTTGGCTGAGCACAGGGACATGAATAAAGAGGGCTTCAGTCTAGAGAGCTGCCGTAGCATGATTGCCTTCATGGATATGGATGGAACAGGCAGACTTAATCTACAAGAGCTTAGACAGTTGTGGAATAAGATCAAACAGTGGCAGGAAATTTTTAAGCACTATGAAGCTGAGCATACTGGCTTCATCAGCAGCTATGAGATGAGAAATGCCATCAATGATGCAGGGTTCCGTCTCAACAACCCACTGTACAACATTATCACAATGCGTTACGCCAATGAGAACATGAACATCGACTTTGACAGCTTTGTTAGCTGTCTTGTGCGTTTGGAGGGGATGTTCAGAGCTTTCCAGGCCTTTGATCAGGATGGAGACGGcactatcagtctgtctgtacTGGAGTGGCTCCAGTTGACTCTGTATGCCTAAACACACTCAGGATTCCGGTGAACCCAAAGAACAGGACCAGAACCACCAGCCTTTACCTCAAACTCAGTGTGCCAAACCTCTGCCACTTCTCCCTTTGTATTTTTAGCCTTGATATAGCACAATTGTTTACAATCTTCACATAAAATAGTCATTACTAAACTTTAACACCATTCCACATTCCGGAGAGTTTTGGAGAGTCAAGGACAGGTGATACGTCAGTCACATGTAGTGATAGGCATGATGTCATCATCTCTTCAACAGGTTGAAAGCAGGTTTTAGACCAGGTTAGAGGTTTTGCAGTATCTCCCAAGTGTCCTGAGGCTCACCTTCCATGTACTCAGTGGCACCATTCATCTCTAGAACTCTGTTTTAACCTAaacacttttactttctttcctttcctttactGCAGTGCTCAAGGTGTCAGGCCACTGTTTGCTACTGTTCATACTCCTTTCATTTTGTTCTTCTTTAGGCCTGTCTTCTTATCTCTTTCTCACCCATATACCAACACCGGAAACCTCTTGCTTCCTGTTACAATACAGTACCTCAGATTATTCTTTAAATAcctctgctctgtttttttttttttttaaatcttttaccGACTGGCTATGATAACCAAATCCATAAACTTGAATTCAATTAAAGATCGGTGTTCGCACACATTTCACAACAGCCACCTTTCAGGCCATTTCACATTTGTTGTTGGAAGATTCCTCTGTTTTTGTTTCCACAAGCCTGTTCACAAGTTGTTTGGTG
>XM_034307782.1
GTTTAGAGAGCTTGAATGCCTTCTGCTGAGGCAGGCCATCCCACTACTCTTTGCAGCTCCGCTCGTCTTTCAATGATGGAGCACCGGTGTTCATTGTTCTCCAGCCAATGGGAATGGTCCAAAAGACTTTAGCtatgtgtatgcatatgtgCATGCATGGCACACATGTGGCATGAAAGTCTTTTGCCTCAAACCCTGACCTCCACTCCATGACCAGGTGAAGTGGGCGTCATTTAGCaggacagccaatcagaggtcAGCGCTTTGGATTTATGCCAGGGATTTTGGACTTCTAAGGCCTAAACGTTGTTGGCCAAAGGCTGTTTTTACAACACCAAATAAACATCTTTGTGAGACAAGATGCCCTACACACCATCAGGCTTTTTTTGTGACCGGCTGAtccgggagagagagagaaaggatggAGAAGGATCTGTGAACAAACCTCTTCGATTCAGTGGCCAGGACTTTAACGCCCTGAAACAGGATTGTCTTAAGAAAAAGGTGCTGTTTGAGGATGATACCTTCCCAGCCAATGTGGAGTCCCTGGGTTACAAGGAACTGGGCCCCAAGTCCAACAAGGTCAAGAACATTGTCTGGAAAAGACCCAAGGATATTTGTGATAATCCACAGTTCATCGTTGGAGGTGCCAGCAGAACAGACATCTGTCAGGGAGACTTGGGAGACTGCTGGCTGCTTGCTGCCATTGCTTGTCTTACGCTGAACGATAAGCTACTGTATCGGGTTGTTCCTCAAGAGCAGAGTTTCTCTGACAATTATGCGGGAATCTTTCATTTTCAGTTCTGGCGTTACGGTGACTGGGTGGATGTTGTGGTTGATGATCGGATCCCTACCATCAATAACCAGCTGGTGTTCACCAAATCTGCTGAGAGGAATGAGTTCTGGAGCGTACTTCTTGAGAAAGCTTATGCCAAACTGCATGGTTCTTATGAGGCTCTGAAAGGTGGAAACACTGCCGAGGGGATGGAAGACTTCACTGGAGGAGTAACTGAGTTTTATGAAATGAAGGAGGCACCCAAAGACCTTTACAAGATCATGAAGAAGGCCTTGGAGCGAGGCTCCCTTATGGGTTGCTCTATTGATGCCTTGGTCCCAGCCCGCTTGGAGACTCGCACCACGACTGGGCTAGTGAAAGGTCATGCCTATTCTGTAACTGCTGTGGAGGAGTGTAAACAGAGCGCACAAAAAGAATCTAAAGTGCGTCTGGTGCGTCTCCGTAATCCGTGGGGCCAAGTGGAGTGGAACGGACCTTGGAGTGATAATTCAAAGGAGTGGGCTACCATTTctaaggaagagaaagaaaacctgCATCTACAGAATGCAGAAGATGGAGAGTTCTGgATGTCCTTTGCTGATTTCACGAAGAACTACACCAAGCTGGAAATCTGTAACCTGACCCCTGATGCTCTGGATGATGATAAGCTCCACAAGTGGACAGTGTCTGTGAATGAGGGGCGCTGGGTAAAAGGCTGCTCTGCTGGAGGCTGCAGGAATTATACTGaCACCTTTTGGACAAACCCACAGTATCGCCTTCGCCTCCTTGAGGAGGATGACGACCCGGACAACAGTGAGGTGGCCTGCTCCTTTGTGGTGGCTCTCatgcagaaaaacagaagaaaagaacgCAAACTGGGTGCCAATTTATTCACTATTGGATTTTCCATCTATGAGGTGCCAAAGGAGaTGCATGGTAACAAGCAGCACATGCAGAAGGAATTCTTCCTGCTGAACTCAACCAAGGCTCGCTGCAAGGCCTACATTAACTTGCGGGAGGTGACTCAACGCTTCAGGCTGAGCCCTGGGGAGTATGTCATTGTGCCTTCCACCTATGAGCCCCACCAGGAAGGCGAGTTTCTCCTCCGTGTCTTCTCTGAAAAGAAGAACATCTCTGAGGAAATAGAGAACAGGATCGAAGCTGACCATCCAGTGCCAGCTCCAGCCTCAGCAGGGGAAGAGACTGAGGAGGACCAGCAGTTCCGTACCATTTTTCAGCAGATAGCTGGGGATGTGAGTACTAGGGAGCCAGAGAGCGCTGGGGGGACAGAAATGGAGATCTCAGCCAACGAGCTGAGAAATGTCCTGAACAAGGTGTTGGCTGAGCACAGGGACATGAATAAAGAGGGCTTCAGTCTAGAGAGCTGCCGTAGCATGATTGCCTTCATGGATATGGATGGAACAGGCAGACTTAATCTACAAGAGCTTAGACAGTTGTGGAATAAGATCAAACAGTGGCAGGAAATTTTTAAGCACTATGAAGCTGAGCATACTGGCTTCATCAGCAGCTATGAGATGAGAAATGCCATCAATGATGCAGGGTTCCGTCTCAACAACCCACTGTACAACATTATCACAATGCGTTACGCCAATGAGAACATGAACATCGACTTTGACAGCTTTGTTAGCTGTCTTGTGCGTTTGGAGGGGATGTTCAGAGCTTTCCAGGCCTTTGATCAGGATGGAGACGGcactatcagtctgtctgtacTGGAGTGGCTCCAGTTGACTCTGTATGCCTAAACACACTCAGGATTCCGGTGAACCCAAAGAACAGGACCAGAACCACCAGCCTTTACCTCAAACTCAGTGTGCCAAACCTCTGCCACTTCTCCCTTTGTATTTTTAGCCTTGATATAGCACAATTGTTTACAATCTTCACATAAAATAGTCATTACTAAACTTTAACACCATTCCACATTCCGGAGAGTTTTGGAGAGTCAAGGACAGGTGATACGTCAGTCACATGTAGTGATAGGCATGATGTCATCATCTCTTCAACAGGTTGAAAGCAGGTTTTAGACCAGGTTAGAGGTTTTGCAGTATCTCCCAAGTGTCCTGAGGCTCACCTTCCATGTACTCAGTGGCACCATTCATCTCTAGAACTCTGTTTTAACCTAaacacttttactttctttcctttcctttactGCAGTGCTCAAGGTGTCAGGCCACTGTTTGCTACTGTTCATACTCCTTTCATTTTGTTCTTCTTTAGGCCTGTCTTCTTATCTCTTTCTCACCCATATACCAACACCGGAAACCTCTTGCTTCCTGTTACAATACAGTACCTCAGATTATTCTTTAAATAcctctgctctgtttttttttttttttaaatcttttaccGACTGGCTATGATAACCAAATCCATAAACTTGAATTCAATTAAAGATCGGTGTTCGCACACATTTCACAACAGCCACCTTTCAGGCCATTTCACATTTGTTGTTGGAAGATTCCTCTGTTTTTGTTTCCACAAGCCTGTTCACAAGTTGTTTGGTG
>XM_034307783.1
GTTTAGAGAGCTTGAATGCCTTCTGCTGAGGCAGGCCATCCCACTACTCTTTGCAGCTCCGCTCGTCTTTCAATGATGGAGCACCGGTGTTCATTGTTCTCCAGCCAATGGGAATGGTCCAAAAGACTTTAGCtatgtgtatgcatatgtgCATGCATGGCACACATGTGGCATGAAAGTCTTTTGCCTCAAACCCTGACCTCCACTCCATGACCAGGTGAAGTGGGCGTCATTTAGCaggacagccaatcagaggtcAGCGCTTTGGATTTATGCCAGGGATTTTGGACTTCTAAGGCCTAAACGTTGTTGGCCAAAGGCTGTTTTTACAACACCAAATAAACATCTTTGTGAGACAAGATGCCCTACACACCATCAGGCTTTTTTTGTGACCGGCTGAtccgggagagagagagaaaggatggAGAAGGATCTGTGAACAAACCTCTTCGATTCAGTGGCCAGGACTTTAACGCCCTGAAACAGGATTGTCTTAAGAAAAAGGTGCTGTTTGAGGATGATACCTTCCCAGCCAATGTGGAGTCCCTGGGTTACAAGGAACTGGGCCCCAAGTCCAACAAGGTCAAGAACATTGTCTGGAAAAGACCCAAGGATATTTGTGATAATCCACAGTTCATCGTTGGAGGTGCCAGCAGAACAGACATCTGTCAGGGAGACTTGGGAGACTGCTGGCTGCTTGCTGCCATTGCTTGTCTTACGCTGAACGATAAGCTACTGTATCGGGTTGTTCCTCAAGAGCAGAGTTTCTCTGACAATTATGCGGGAATCTTTCATTTTCAGTTCTGGCGTTACGGTGACTGGGTGGATGTTGTGGTTGATGATCGGATCCCTACCATCAATAACCAGCTGGTGTTCACCAAATCTGCTGAGAGGAATGAGTTCTGGAGCGTACTTCTTGAGAAAGCTTATGCCAAACTGCATGGTTCTTATGAGGCTCTGAAAGGTGGAAACACTGCCGAGGGGATGGAAGACTTCACTGGAGGAGTAACTGAGTTTTATGAAATGAAGGAGGCACCCAAAGACCTTTACAAGATCATGAAGAAGGCCTTGGAGCGAGGCTCCCTTATGGGTTGCTCTATTGATGCCTTGGTCCCAGCCCGCTTGGAGACTCGCACCACGACTGGGCTAGTGAAAGGTCATGCCTATTCTGTAACTGCTGTGGAGGAGTGTAAACAGAGCGCACAAAAAGAATCTAAAGTGCGTCTGGTGCGTCTCCGTAATCCGTGGGGCCAAGTGGAGTGGAACGGACCTTGGAGTGATAATTCAAAGGAGTGGGCTACCATTTctaaggaagagaaagaaaacctgCATCTACAGAATGCAGAAGATGGAGAGTTCTGgATGTCCTTTGCTGATTTCACGAAGAACTACACCAAGCTGGAAATCTGTAACCTGACCCCTGATGCTCTGGATGATGATAAGCTCCACAAGTGGACAGTGTCTGTGAATGAGGGGCGCTGGGTAAAAGGCTGCTCTGCTGGAGGCTGCAGGAATTATACTGaCACCTTTTGGACAAACCCACAGTATCGCCTTCGCCTCCTTGAGGAGGATGACGACCCGGACAACAGTGAGGTGGCCTGCTCCTTTGTGGTGGCTCTCatgcagaaaaacagaagaaaagaacgCAAACTGGGTGCCAATTTATTCACTATTGGATTTTCCATCTATGAGGTGCCAAAGGAGaTGCATGGTAACAAGCAGCACATGCAGAAGGAATTCTTCCTGCTGAACTCAACCAAGGCTCGCTGCAAGGCCTACATTAACTTGCGGGAGGTGACTCAACGCTTCAGGCTGAGCCCTGGGGAGTATGTCATTGTGCCTTCCACCTATGAGCCCCACCAGGAAGGCGAGTTTCTCCTCCGTGTCTTCTCTGAAAAGAAGAACATCTCTGAGGAAATAGAGAACAGGATCGAAGCTGACCATCCAGTGCCAGCTCCAGCCTCAGCAGGGGAAGAGACTGAGGAGGACCAGCAGTTCCGTACCATTTTTCAGCAGATAGCTGGGGATGAAATGGAGATCTCAGCCAACGAGCTGAGAAATGTCCTGAACAAGGTGTTGGCTGAGCACAGGGACATGAATAAAGAGGGCTTCAGTCTAGAGAGCTGCCGTAGCATGATTGCCTTCATGGATATGGATGGAACAGGCAGACTTAATCTACAAGAGCTTAGACAGTTGTGGAATAAGATCAAACAGTGGCAGGAAATTTTTAAGCACTATGAAGCTGAGCATACTGGCTTCATCAGCAGCTATGAGATGAGAAATGCCATCAATGATGCAGTCATGTGTGTTATGTGTCATTCAGGGTTCCGTCTCAACAACCCACTGTACAACATTATCACAATGCGTTACGCCAATGAGAACATGAACATCGACTTTGACAGCTTTGTTAGCTGTCTTGTGCGTTTGGAGGGGATGTTCAGAGCTTTCCAGGCCTTTGATCAGGATGGAGACGGcactatcagtctgtctgtacTGGAGTGGCTCCAGTTGACTCTGTATGCCTAAACACACTCAGGATTCCGGTGAACCCAAAGAACAGGACCAGAACCACCAGCCTTTACCTCAAACTCAGTGTGCCAAACCTCTGCCACTTCTCCCTTTGTATTTTTAGCCTTGATATAGCACAATTGTTTACAATCTTCACATAAAATAGTCATTACTAAACTTTAACACCATTCCACATTCCGGAGAGTTTTGGAGAGTCAAGGACAGGTGATACGTCAGTCACATGTAGTGATAGGCATGATGTCATCATCTCTTCAACAGGTTGAAAGCAGGTTTTAGACCAGGTTAGAGGTTTTGCAGTATCTCCCAAGTGTCCTGAGGCTCACCTTCCATGTACTCAGTGGCACCATTCATCTCTAGAACTCTGTTTTAACCTAaacacttttactttctttcctttcctttactGCAGTGCTCAAGGTGTCAGGCCACTGTTTGCTACTGTTCATACTCCTTTCATTTTGTTCTTCTTTAGGCCTGTCTTCTTATCTCTTTCTCACCCATATACCAACACCGGAAACCTCTTGCTTCCTGTTACAATACAGTACCTCAGATTATTCTTTAAATAcctctgctctgtttttttttttttttaaatcttttaccGACTGGCTATGATAACCAAATCCATAAACTTGAATTCAATTAAAGATCGGTGTTCGCACACATTTCACAACAGCCACCTTTCAGGCCATTTCACATTTGTTGTTGGAAGATTCCTCTGTTTTTGTTTCCACAAGCCTGTTCACAAGTTGTTTGGTG
>XR_004578922.1
GTTTAGAGAGCTTGAATGCCTTCTGCTGAGGCAGGCCATCCCACTACTCTTTGCAGCTCCGCTCGTCTTTCAATGATGGAGCACCGGTGTTCATTGTTCTCCAGCCAATGGGAATGGTCCAAAAGACTTTAGCtatgtgtatgcatatgtgCATGCATGGCACACATGTGGCATGAAAGTCTTTTGCCTCAAACCCTGACCTCCACTCCATGACCAGGTGAAGTGGGCGTCATTTAGCaggacagccaatcagaggtcAGCGCTTTGGATTTATGCCAGGGATTTTGGACTTCTAAGGCCTAAACGTTGTTGGCCAAAGGCTGTTTTTACAACACCAAATAAACATCTTTGTGAGACAAGATGCCCTACACACCATCAGGCTTTTTTTGTGACCGGCTGAtccgggagagagagagaaaggatggAGAAGGATCTGTGAACAAACCTCTTCGATTCAGTGGCCAGGACTTTAACGCCCTGAAACAGGATTGTCTTAAGAAAAAGGTGCTGTTTGAGGATGATACCTTCCCAGCCAATGTGGAGTCCCTGGGTTACAAGGAACTGGGCCCCAAGTCCAACAAGGTCAAGAACATTGTCTGGAAAAGACCCAAGGATATTTGTGATAATCCACAGTTCATCGTTGGAGGTGCCAGCAGAACAGACATCTGTCAGGGAGACTTGGGAGACTGCTGGCTGCTTGCTGCCATTGCTTGTCTTACGCTGAACGATAAGCTACTGTATCGGGTTGTTCCTCAAGAGCAGAGTTTCTCTGACAATTATGCGGGAATCTTTCATTTTCAGTTCTGGCGTTACGGTGACTGGGTGGATGTTGTGGTTGATGATCGGATCCCTACCATCAATAACCAGCTGGTGTTCACCAAATCTGCTGAGAGGAATGAGTTCTGGAGCGTACTTCTTGAGAAAGCTTATGCCAAACTGCATGGTTCTTATGAGGCTCTGAAAGGTGGAAACACTGCCGAGGGGATGGAAGACTTCACTGGAGGAGTAACTGAGTTTTATGAAATGAAGGAGGCACCCAAAGACCTTTACAAGATCATGAAGAAGGCCTTGGAGCGAGGCTCCCTTATGGGTTGCTCTATTGATGCCTTGGTCCCAGCCCGCTTGGAGACTCGCACCACGACTGGGCTAGTGAAAGGTCATGCCTATTCTGTAACTGCTGTGGAGGAGTGTAAACAGAGCGCACAAAAAGAATCTAAAGTGCGTCTGGTGCGTCTCCGTAATCCGTGGGGCCAAGTGGAGTGGAACGGACCTTGGAGTGATAATTCAAAGGAGTGGGCTACCATTTctaaggaagagaaagaaaacctgCATCTACAGAATGCAGAAGATGGAGAGTTCTGgATGTCCTTTGCTGATTTCACGAAGAACTACACCAAGCTGGAAATCTGTAACCTGACCCCTGATGCTCTGGATGATGATAAGCTCCACAAGTGGACAGTGTCTGTGAATGAGGGGCGCTGGGTAAAAGGCTGCTCTGCTGGAGGCTGCAGGAATTATACTGaCACCTTTTGGACAAACCCACAGTATCGCCTTCGCCTCCTTGAGGAGGATGACGACCCGGACAACAGTGAGGTGGCCTGCTCCTTTGTGGTGGCTCTCatgcagaaaaacagaagaaaagaacgCAAACTGGGTGCCAATTTATTCACTATTGGATTTTCCATCTATGAGGTGCCAAAGGAGaTGCATGGTAACAAGCAGCACATGCAGAAGGAATTCTTCCTGCTGAACTCAACCAAGGCTCGCTGCAAGGCCTACATTAACTTGCGGGAGGTGACTCAACGCTTCAGGCTGAGCCCTGGGGAGTATGTCATTGTGCCTTCCACCTATGAGCCCCACCAGGAAGGCGAGTTTCTCCTCCGTGTCTTCTCTGAAAAGAAGAACATCTCTGAGGAAATAGAGAACAGGATCGAAGCTGACCATCCAGTGCCAGCTCCAGCCTCAGCAGGGGAAGAGACTGAGGAGGACCAGCAGTTCCGTACCATTTTTCAGCAGATAGCTGGGGATGAAATGGAGATCTCAGCCAACGAGCTGAGAAATGTCCTGAACAAGACAGGGACATGAATAAAGAGGGCTTCAGTCTAGAGAGCTGCCGTAGCATGATTGCCTTCATGGATATGGATGGAACAGGCAGACTTAATCTACAAGAGCTTAGACAGTTGTGGAATAAGATCAAACAGTGGCA

Function

symbol description
capn3 Enables several functions, including identical protein binding activity; ligase regulator activity; and titin binding activity. Involved in several processes, including calcium-dependent self proteolysis; protein destabilization; and regulation of transcription, DNA-templated. Located in cytoplasm and nucleolus. Implicated in autosomal dominant limb-girdle muscular dystrophy; autosomal recessive limb-girdle muscular dystrophy type 2A; and muscular dystrophy.

NR:

description
PREDICTED: calpain-3 isoform X2

GO: NA

KEGG:

id description
K08573 CAPN3; calpain-3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026934051.2 False 3264 mRNA 0.47 21 15107120 15117364
XM_034307782.1 True 3300 mRNA 0.47 21 15107120 15117364
XM_034307783.1 False 3288 mRNA 0.47 21 15107120 15117364
XR_004578922.1 False 2206 misc_RNA 0.49 17 15109594 15117364

Neighbor

gene id symbol gene type direction distance location
tagapa LOC108269769 coding downstream 27529 15074911 ~ 15079591 (-)
ezra ezr,LOC108269770,LOC108435787,LOC106607585,LOC107662612,LOC103355633 coding downstream 32768 15065039 ~ 15074352 (-)
kcnk3b kcnk3b,LOC108269606,LOC108435788,LOC107739252,LOC107559904,LOC107664451,LOC107732341,LOC107586855,LOC107662623 coding downstream 42782 15059864 ~ 15064338 (-)
marc1 mosc1 coding downstream 50444 15050847 ~ 15056676 (-)
LOC113538997 LOC108270103 coding downstream 91654 15006613 ~ 15015466 (-)
ganc ganc,LOC108269767 coding upstream 1147 15118511 ~ 15126777 (-)
LOC113538889 LOC108269495 coding upstream 10479 15127843 ~ 15130701 (-)
gstz1 gstz1 coding upstream 59980 15177344 ~ 15184952 (-)
si:ch211-163l21.10 bbof1 coding upstream 78464 15195828 ~ 15214198 (-)
coq6 coq6,LOC107739237,LOC107732250,LOC107586847 coding upstream 112550 15229914 ~ 15241927 (-)
G165882 LOC106571191,LOC101157503 non-coding downstream 310 15100092 ~ 15106810 (-)
G165879 NA non-coding downstream 84676 15019814 ~ 15022444 (-)
G165873 NA non-coding downstream 109929 14996631 ~ 14997191 (-)
G165864 NA non-coding downstream 153004 14951741 ~ 14954116 (-)
G165856 NA non-coding downstream 165077 14941701 ~ 14942043 (-)
G165907 NA non-coding upstream 55873 15173237 ~ 15226726 (-)
G165949 fam161b non-coding upstream 126921 15244285 ~ 15244498 (-)
G165950 fam161b non-coding upstream 127502 15244866 ~ 15245463 (-)
G165951 NA non-coding upstream 128220 15245584 ~ 15245909 (-)
LOC113539013 NA non-coding upstream 363766 15481130 ~ 15491008 (-)
nenf nenf other downstream 24915 15079696 ~ 15082205 (-)
nkx2.2a nkx2-2,nkx2.2a,LOC107558480,LOC107707659,LOC107737280,LOC108435751 other downstream 334239 14727133 ~ 14772881 (-)
exd2 exd2,LOC107558452 other downstream 906323 14190691 ~ 14200797 (-)
G165451 LOC108269968 other downstream 916635 14188238 ~ 14190485 (-)
trnal-uaa_1 NA other downstream 1251328 13855388 ~ 13855792 (-)
pgfb pgf,LOC108435746 other upstream 185871 15303235 ~ 15322051 (-)
ktn1 ktn1,LOC107668535 other upstream 515638 15633002 ~ 15663495 (-)
eml5 eml5,LOC108435760 other upstream 598196 15715560 ~ 15762718 (-)
mideasb elmsan1 other upstream 1755915 16873279 ~ 16898730 (-)
htr1b htr1e,LOC108269541 other upstream 2049504 17166868 ~ 17247823 (-)

Expression


Co-expression Network