ahsa1b (ahsa1,LOC108425677,LOC107732084)


Basic Information

Item Value
gene id ahsa1b
gene name ahsa1,LOC108425677,LOC107732084
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 15987086 ~ 15992896 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026934497.2
acGTAATTCCGTTTCCAGTAATTTCTACGGGCAACAAAATCGGAGGTTCGCGTGAAGAGTGTTCCAGAAGTCGCTTGTTGACCCGACTGTTTCAGACGTCTGTCCGCTGATATAATCCGTCCTGTACTTTTGAGGAAACATGGCTAAGTGGGGAGAAGGGGACCCTCGGTGGATTGTGGAAGAAAGAGCGGATGCTACAAATGTCAACAATTGGCACTGGACGGAGAGGGACGCCACAAACTGGTCATCAGAGAAGTTGAAAGAGCTTCTGGTGGGACTGCAAGTAGAAAACGATGAGGGCAAGTGTGAAATCACAGAGGTCAGCAAGATGGAAGGAGAGGCTTCTATCAACAACCGCAAAGGAAAGCTCATCTTCTTCTACGAGTGGAACTTAAAGGCCAAGTGGAAAGggaCAACGAAATCGGGGATCAAATACAAAGGCGATGTTGAAATTCCAAACCTTTCTGACGAAAATGATAAGGAGGACCTTGATATCACTGTGTCCCTTTGTAAAGATGAGCCTGACACACCACTCTTTACACTGATGAAAGTGGAGGGGGCAGAGAAAGTCCGCGAGGCACTAGACAGCTACGTTGAGCTTCTCAAAACAGAGTTCACGCAGGGTATGATCTTACCGACAGCCAATGGGGTGACCAAACAGCCGACCTCTCAGGCAAAAGTCAAGATGGACAAAACCCAGATTGGCTCAGGCAGTGCAGCTCCTCCTCCCTGCACAGGAGTGAAGATCCCCACTTGCAAGTTCTTGATGAAAGACACTTTCCTCACTTCACCGGAggacctctacagagccttcCTCAACCAAGAGatGGTGCAGGCGTTTACACACACGGCTGCCGTGGTTGAGCCAGAGAAGGGAGGAAAGTTCCGTCTGTTGGGTGGAAATGTATTCGGAGAGTTCCAGGAGCTGGTTCCTGAGGAGAAGATAGTCATGAAATGGAGGTACAACACGTGGCCAAGCGAGCACTATGCGACAGTGACGCTGACCTTCATAGACAAGGGCAATGAGACGGAGCTGAAGATCGAGTGTCGAGCTGTACCAGAGAGTGAGGAGGACCGCACACGAGAAGGCTGGCAGAGGTACTACTGCCAGGCCATCAAACAGACATTTGGCTTTGGTGCACGACTCTGCTGAGCTCCAGCTTCAACCATCACTattttggctgatttttttttttttcttccctgtgTACAAATGAGCACCTGGAATGTGACTCTACTGAAAAACAGACTTAACATTGCACCATGTTCTACCTTTCTGGTTTtggtttctgtgtttaaaaaaaaaaatccaaaaatcagaaaagaaaatgaatagaTACTATGATTGACATGGAGTAAGAAAGGGGGAGACTTGAGTCATTCTTTTCATGTATCATCTGCATATGTATgtaagaaacatttttattgtaGTGCAGTAAGACCTACATTTGGCACTCTCACCTCCTGACCTTGTCTGGACAGGGGCAGACTTGACTAGTGCCTTCTTTGGATTGAGAGTTTAACGTATGGATCTATGGCAAAGACTTGTTCATGTCATGTAGTCGAGCAGAATAAACTGTCAAACCACTAAA

Function

symbol description
ahsa1 Enables ATPase activator activity; Hsp90 protein binding activity; and chaperone binding activity. Involved in positive regulation of ATPase activity. Located in cytosol.

NR:

description
PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0032781 positive regulation of ATPase activity biological_process
GO:0051087 chaperone binding molecular_function
GO:0001671 ATPase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026934497.2 True 1592 mRNA 0.47 9 15987086 15992896

Neighbor

gene id symbol gene type direction distance location
jmjd1ca LOC108270245 coding downstream 5302 15917801 ~ 15981784 (-)
egr2a egr2a,LOC108269483 coding downstream 72376 15906357 ~ 15914710 (-)
rtkn2a LOC108269925 coding downstream 97548 15883398 ~ 15889538 (-)
zfyve28 zfyve28 coding downstream 108742 15864120 ~ 15878344 (-)
nt5c1ab LOC108269929,LOC108425685,LOC106610886 coding downstream 123458 15858730 ~ 15863628 (-)
si:dkey-229e3.2 LOC108269466 coding upstream 8166 16001062 ~ 16007423 (-)
eprs1 eprs,LOC107732550 coding upstream 17581 16010477 ~ 16035433 (-)
LOC113539022 NA coding upstream 23456 16016352 ~ 16016484 (-)
zgc:174356 LOC108269442,LOC107719194,LOC107662648,LOC106601284 coding upstream 126821 16119717 ~ 16136443 (-)
LOC117598246 NA coding upstream 158757 16151653 ~ 16155407 (-)
G166380 NA non-coding downstream 53649 15933157 ~ 15933437 (-)
G166319 NA non-coding downstream 90516 15895667 ~ 15896570 (-)
G166289 NA non-coding downstream 140831 15664486 ~ 15846255 (-)
G166286 NA non-coding downstream 379564 15605903 ~ 15607522 (-)
LOC113539013 NA non-coding downstream 496078 15481130 ~ 15491008 (-)
G166390 NA non-coding upstream 7323 16000219 ~ 16000512 (-)
G166484 NA non-coding upstream 274333 16267229 ~ 16267515 (-)
G166633 NA non-coding upstream 451945 16444841 ~ 16446005 (-)
G166865 NA non-coding upstream 751710 16744606 ~ 16744822 (-)
LOC113538645 NA non-coding upstream 846185 16839081 ~ 16865427 (-)
eml5 eml5,LOC108435760 other downstream 224368 15715560 ~ 15762718 (-)
ktn1 ktn1,LOC107668535 other downstream 323591 15633002 ~ 15663495 (-)
pgfb pgf,LOC108435746 other downstream 665035 15303235 ~ 15322051 (-)
capn3a capn3,LOC108269768,LOC108435782 other downstream 869722 15107120 ~ 15117364 (-)
nenf nenf other downstream 904881 15079696 ~ 15082205 (-)
mideasb elmsan1 other upstream 880383 16873279 ~ 16898730 (-)
htr1b htr1e,LOC108269541 other upstream 1173972 17166868 ~ 17247823 (-)
cmpk2 cmpk2 other upstream 1622842 17615738 ~ 17624534 (-)
G167566 apob other upstream 2312847 18305743 ~ 18316207 (-)
gdf7 LOC108270114 other upstream 2382507 18375403 ~ 18382455 (-)

Expression


Co-expression Network