khk (khk,LOC107729261,LOC107693158,LOC107725530)


Basic Information

Item Value
gene id khk
gene name khk,LOC107729261,LOC107693158,LOC107725530
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 28987359 ~ 28996157 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034307850.1
CATGTTCCACttaccacaccacacacacaccacaccacaccaccgACACACCACCCatcacaccccacacacacacacacacacacagagtggaaCATGGAGCAGAAGAAGATCCTGTGTGTCGGTTTGGTGTGTTTGGACATCATTAACGTGGTGGATAAATTTCCGGAAGAGGACACGGACACCAGatgTGTGTCTCAGAGGTGGCAGCGAGGTGGGAACGCCTCGAACTCCTGCACGGTTCTGTCTCTGCTCGGTGCTCCCTGTGCCTTCATGGGGTCTCTGGCTGCAGGACCAATTGCTGACTTCATCGTGGGTGATTTTAGCCGCCGCGGTGTGGATATTTCTGGTGTAGCGTGGCAGCAGTGTGGCGAGACGCCGTGTGCGTGTTGTATTGTTTGTCAAAAGTCGGGTTCTCGCACCGTGGTTCTCTATGACACAAACCTGCCTGATGTTTGTGCAGATGATTTCTCAAAGCTGGATCTCAGTCACTACAAGTGGATTCACTTTGAGggtCGTAACGCTGATGAACAGATGAAGATGATCGAGCAGGTGAAACTCTACAACGCCACACAGGAGGAGAAGAACAGGATCACCATCTCCGTGGAGATCGAGAAAACCCGCCCCTCGCTCTATCAGCTCTTCCCCCATGGAGACGTGGTGTTTGTGAGTAAAGACCTGGCGATGCATTTCGGGTTTCAGTCGGCGTCCAGTGCAGTGAAGGGGTTTTACAGCCGTGTGAAAGAAGGGGCTGTGCTGATCTGTGCCTGGGCGGAGAACGGTGCCGACGCGATGGGTCCTGATGGTGCCGTACTGCACTCTGACGCTTTTCCTCCTGAGAAACTGGTGGACACACTGGGAGCTGGAGACACGTTTAACGCCTCGGTCATTTACAGCCTGTCTAACGGAGGGTCTTTACAGGAAGCGCTCACATTTGGCTGCCAGATTGCGGGAAAGAAATGCGGTGTTCACGGCTACGACGGGATCGTTCAGCGAAAACAGAGCTGAAGATGCAGATGTTCAGGAAAATCAC
>XM_034307851.1
CCATGTTCCACttaccacaccacacacacaccacaccacaccaccgACACACCACCCatcacaccccacacacacacacacacacacagagtggaaCATGGAGCAGAAGAAGATCCTGTGTGTCGGTTTGGTGTGTTTGGACATCATTAACGTGGTGGATAAATTTCCGGAAGAGGACACGGACACCAGatgTGTGTCTCAGAGGTGGCAGCGAGGTGGGAACGCCTCGAACTCCTGCACGGTTCTGTCTCTGCTCGGTGCTCCCTGTGCCTTCATGGGGTCTCTGGCTGCAGGACCAATTGCTGACTTCATcctgaatgattttaaaatgtaccACGTTGACGTGTCTCTTGTTACTGAGCATGCTCAGTGCTCATGCCCCGCCTCCGTCGTCATCAGCAGCCAGAGCAGCGGCACACGCACCATCCTGCACATgaacagAAACCTGCCTGATGTTTGTGCAGATGATTTCTCAAAGCTGGATCTCAGTCACTACAAGTGGATTCACTTTGAGggtCGTAACGCTGATGAACAGATGAAGATGATCGAGCAGGTGAAACTCTACAACGCCACACAGGAGGAGAAGAACAGGATCACCATCTCCGTGGAGATCGAGAAAACCCGCCCCTCGCTCTATCAGCTCTTCCCCCATGGAGACGTGGTGTTTGTGAGTAAAGACCTGGCGATGCATTTCGGGTTTCAGTCGGCGTCCAGTGCAGTGAAGGGGTTTTACAGCCGTGTGAAAGAAGGGGCTGTGCTGATCTGTGCCTGGGCGGAGAACGGTGCCGACGCGATGGGTCCTGATGGTGCCGTACTGCACTCTGACGCTTTTCCTCCTGAGAAACTGGTGGACACACTGGGAGCTGGAGACACGTTTAACGCCTCGGTCATTTACAGCCTGTCTAACGGAGGGTCTTTACAGGAAGCGCTCACATTTGGCTGCCAGATTGCGGGAAAGAAATGCGGTGTTCACGGCTACGACGGGATCGTTCAGCGAAAACAGAGCTGAAGATGCAGATGTTCAGGAAAATCAC
>XM_034307852.1
ATGTTCCACttaccacaccacacacacaccacaccacaccaccgACACACCACCCatcacaccccacacacacacacacacacacagagtggaaCATGGAGCAGAAGAAGATCCTGTGTGTCGGTTTGGTGTGTTTGGACATCATTAACGTGGTGGATAAATTTCCGGAAGAGGACACGGACACCAGatgTGTGTCTCAGAGGTGGCAGCGAGGTGGGAACGCCTCGAACTCCTGCACGGTTCTGTCTCTGCTCGGTGCTCCCTGTGCCTTCATGGGGTCTCTGGCTGCAGGACCAATTGCTGAAAACCTGCCTGATGTTTGTGCAGATGATTTCTCAAAGCTGGATCTCAGTCACTACAAGTGGATTCACTTTGAGggtCGTAACGCTGATGAACAGATGAAGATGATCGAGCAGGTGAAACTCTACAACGCCACACAGGAGGAGAAGAACAGGATCACCATCTCCGTGGAGATCGAGAAAACCCGCCCCTCGCTCTATCAGCTCTTCCCCCATGGAGACGTGGTGTTTGTGAGTAAAGACCTGGCGATGCATTTCGGGTTTCAGTCGGCGTCCAGTGCAGTGAAGGGGTTTTACAGCCGTGTGAAAGAAGGGGCTGTGCTGATCTGTGCCTGGGCGGAGAACGGTGCCGACGCGATGGGTCCTGATGGTGCCGTACTGCACTCTGACGCTTTTCCTCCTGAGAAACTGGTGGACACACTGGGAGCTGGAGACACGTTTAACGCCTCGGTCATTTACAGCCTGTCTAACGGAGGGTCTTTACAGGAAGCGCTCACATTTGGCTGCCAGATTGCGGGAAAGAAATGCGGTGTTCACGGCTACGACGGGATCGTTCAGCGAAAACAGAGCTGAAGATGCAGATGTTCAGGAAAATCAC

Function

symbol description
khk Predicted to enable ketohexokinase activity. Predicted to be involved in several processes, including regulation of glycogen metabolic process; response to hexose; and response to sucrose. Predicted to act upstream of or within phosphorylation. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in essential fructosuria. Orthologous to human KHK (ketohexokinase).

NR:

description
ketohexokinase isoform X1

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K00846 KHK; ketohexokinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034307850.1 False 1033 mRNA 0.53 8 28987359 28996156
XM_034307851.1 True 1034 mRNA 0.53 8 28987359 28996157
XM_034307852.1 False 897 mRNA 0.53 7 28987359 28996155
Loading

Neighbor

gene id symbol gene type direction distance location
gpn1 gpn1,LOC107729295,LOC107725955,LOC107682285,LOC107693155 coding downstream 58464 28916376 ~ 28928895 (-)
il17a/f2 LOC108269798 coding downstream 102250 28882252 ~ 28885109 (-)
lrrc57 lrrc57,LOC107682003 coding downstream 109478 28867671 ~ 28877881 (-)
nfkbiab nfkbia coding downstream 215197 28768475 ~ 28772162 (-)
ppp2r3c ppp2r3c,LOC107682116,LOC107725453,LOC106611177 coding downstream 245288 28736318 ~ 28742071 (-)
mrpl57 mrpl57 coding upstream 76547 29072704 ~ 29075467 (-)
calm1a LOC108270185 coding upstream 93015 29089172 ~ 29092223 (-)
ndnfl LOC108270182 coding upstream 122216 29118373 ~ 29130728 (-)
LOC113525666 LOC108261332 coding upstream 141863 29138020 ~ 29146605 (-)
G173260 NA non-coding downstream 2118 28933960 ~ 28985241 (-)
G173293 NA non-coding downstream 113041 28873443 ~ 28874318 (-)
G173292 NA non-coding downstream 115404 28871470 ~ 28871955 (-)
G173268 NA non-coding downstream 120684 28865913 ~ 28866675 (-)
G173289 NA non-coding downstream 123192 28862908 ~ 28864167 (-)
G173262 NA non-coding upstream 18192 29014349 ~ 29014929 (-)
G173338 NA non-coding upstream 73878 29070035 ~ 29071425 (-)
G173339 NA non-coding upstream 80106 29076263 ~ 29077297 (-)
G173288 NA non-coding upstream 82257 29078414 ~ 29080610 (-)
G173349 NA non-coding upstream 111719 29107876 ~ 29108297 (-)
stmn4l stmn4,stmn4l,LOC108413759,LOC107682023,LOC107586609,LOC107693156,LOC107729296,LOC107589635 other downstream 78807 28900904 ~ 28908552 (-)
ralgapa1 ralgapa1,LOC107589631,LOC107725466,LOC107682070,LOC107586611,LOC107693153 other downstream 127348 28798149 ~ 28860011 (-)
G172919 NA other downstream 1074815 27912237 ~ 27912544 (-)
si:ch73-204p21.2 NA other downstream 1076469 27899482 ~ 27910890 (-)
efcab11 efcab11 other downstream 1261602 27671623 ~ 27725757 (-)
G173434 kif26b,LOC107589674 other upstream 239762 29235919 ~ 29239270 (-)
smyd3 smyd3 other upstream 249812 29245969 ~ 29329076 (-)

Expression

khk(khk,LOC107729261,LOC107693158,LOC107725530) Expression in all Baseline Samples

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 50.
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khk(khk,LOC107729261,LOC107693158,LOC107725530) Expression in each Bioproject

Bar chart with 3 bars.
khk(khk,LOC107729261,LOC107693158,LOC107725530) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network