ywhaqb (LOC108269934)


Basic Information

Item Value
gene id ywhaqb
gene name LOC108269934
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 19449741 ~ 19457559 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034308097.1
AGAGAACAGGCGCGGtcctgcgctctgattggagGAGGACGTCGTGGGCGTGGTTATACCATACAGAAGTGCTTTCCGATGAGGAATGTATGCCTCATTCTCTCAGCTGCTCAGGTGTAAAGAGGAGCGTTCATATCTCAGCTTCTTTGAAGATTGAGGAAGAACTGTGTCCACTGCAGCCACTTGATTAGTCTTAAAACAAAATTCCCCaaaattttgtttcattgttgTGCTCCGTAGAgagcttctttctttttttggtttccATAAAAACACCCATAAAACAGACCCAGAATGGAAAGAGCAGACTTTGTCCAAAAGGCCAAATTGGCTGAGCAAGCTGAGCGTTATGAAGATATGGTGGCTTGTATGAGGGAGGTGACCAAGACTGGCCACGATCTCTCTAATGAGGAAAGGAACTTGCTGTCTGTTGCCTACAAGAATGTGGTGGGCACACGCAGGTTGGCCTGGCGGGTCATATCCAACATTGAGAACAATCCTGAAGAGAGTGACAAGAAGCCTGAGGTGGTCAAAGAATACCGGGAGAAAGTGGAGCGTGAACTCCGAGATATCTGCAATGATGTACTGGAGCTGCTGAGTAAATACCTAATAACAAATTCTGAAAATTACGAAAACAAGGTCTTTTACCTGAAGATGAAGGGAGACTACTTCAGATACCTTGCTGAAGTGGCCCCTAAAGATGataaatCTGCTATAAATGACTCTCAGCAAGCCTACCAAGAGGCATTCAATCTGAGCAAGGCGGAGATGCAGCCAACACACCCCATCCACCTGGGCCTTGCCCTGAACTTCTCTGTCTTCTATTACGAGATTCTTGGCTCTCCAAAGGAGGCTTGCAACCTCGCCAGAGAGGTACTTGAAAAAGCCACAGCAGAGGTCAGTTCACTTAATGAAGAGTCTTTTAAAGACAGCACCATCATCATACAGCTGCTAAGAGACAACCTCTCCTTATGGACATCCGATAACAGCGATGGAAAATGAAGGACAGAAGAGCTGAAACTTCCATGCCTTCAGATTAGATGGGGGATTATCCAATAGGATGAAAATCATTCTTTTAATAATCCATCACCTCACACTACTGTCTACTGCACCTCAGTGCTGCTATTTAAGCTATGTTATGGGTTATACCACTGTTAGTTAGTCAAACTCCTAATGCTCTTAACgcaaaaaaaggtaaaaaatcGAAAGATTCTCACATTAGGAAAATTAAGAGTTCACATTTAAACCAGTAGATTTTACTTTAACATTTGAGTAATGTGTTTTATGGTCATTTCTTAATGGGGAATCTTTAAATCTTTAGAATATTCTTTTGTACTTATGCAACGTGACATTCAAAATTCCTAACTGCTTGGTCACATACAAACATGAAAACCCACttgaaaacaacaataaaactgAGGAATGAGGCTCTGAGATTTTCTAAAATCCAAACAATTTTACAAAAGATTTTCCCAGTTGAAAAAgggcaaatgtattttttcattaattatgacacttaaaattgtaaaattggaAGATGAGTAATATGTCAGCCTTTTTAATTTtgcctaataaataaaaacttagtAATATCTAAGGCTTCAGGTTGAATGAGCGCAGAGAGGAGTGATGTGCAAGAGCTCCACAGTTTGTAAGGAAGCTAAAAGCTCTGTGACAAACAGTATCCAACATATGAAGATaccagtgtgatttatttatatacaaccAATCAGAATAATCAAGAACAGATGAAAATGTCAATTCAGCTAGTCATCGTCTAACAAAAAATAAGTACTTGATTGTTCAtctgtataaaataatacaatgttCAAATAGATTTCATTTGACCTATTGTATGTGCACAGCTGTTAATTCTGCATTATCTCTGCATTCTTTCAGCAGTGAACATGAATTTATGAACTTTTTACAGTTTtgcagtttagtgtttttattgctaTTGATAGCTGCATAAATTCAAGACTCGTATCTCACAATTTACATGAATTAGAAATGATGCAGAAGCAGATGTTTGACATTTTAACAGTGAAAAGTATGTAAGTTGAATAAGGTATGTTCCCATGCATGTTCTTAAAGACAAATATTGTTGGAATGTCATGGCAAGAACAGTTAAATACTTTTCACAGCAGGTTTGATAAATTGTGAGACTTTGAGCGAGTGCTCGGATAGATTTGGAACATGAATGTGTTTTGCTAGTCAACAATTACAGTCATAATCACCTTCTGGTCTGTTCATGCTTTACTTCTGTCATTCTAATGCCAccttaaaaaatgacaaaactgagctggaaacaaaaaagtaaagGGAAAATCTGCAGAGACAAAGaagtgaaacatttcaaaatggtactacaaaacaaaattattgcATCAAAAAACATCAATACCTTACTTTGTTTGCAACTTCAtcattgtgatattttctattttgaacAATGTTAAAGCCCTCAGTTTGACTCCATAGCTGGCTGATGGTTTATAGATTGGCCCAGTCAGGTTAGCTATGCTTCTGGGGACAGTACATACCTATTTCCTTTCTCTCAATGCGCAGCTTTTGCTTCGGGAGTATCCATTACTGAAGGTGTGGCTTTAGCAATGCGCCCTCTGTCGGGTGCCTAAGTTTATAGGTATAGGGCTACCATCTTGCTCATAACTTGAATCTATCAGAAAGCTGATATACTGGGGCCACAGATTATGTAACTTAAGGGAATATGAATCCTAACTAGTGGCCacaacatcatcacatcatcaaaacTTTGATTTACTATGATATTAAAAGGGAATGTAAAGGGCCAATGGCTTTGGTCTGTAATCTCTCAAGATAATTAAAATCATGATTAAATCTGAA
>XM_034308098.1
ATACCATACAGAAGTGCTTTCCGATGAGGAATGTATGCCTCATTCTCTCAGCTGCTCAGGTGTAAAGAGGAGCGTTCATATCTCAGGTGAGCTTCTTTGAAGATTGAGGAAGAACTGTGTCCACTGCAGCCACTTGATTAGTCTTAAAACAAAATTCCCCaaaattttgtttcattgttgTGCTCCGTAGAgagcttctttctttttttggtttccATAAAAACACCCATAAAACAGACCCAGAATGGAAAGAGCAGACTTTGTCCAAAAGGCCAAATTGGCTGAGCAAGCTGAGCGTTATGAAGATATGGTGGCTTGTATGAGGGAGGTGACCAAGACTGGCCACGATCTCTCTAATGAGGAAAGGAACTTGCTGTCTGTTGCCTACAAGAATGTGGTGGGCACACGCAGGTTGGCCTGGCGGGTCATATCCAACATTGAGAACAATCCTGAAGAGAGTGACAAGAAGCCTGAGGTGGTCAAAGAATACCGGGAGAAAGTGGAGCGTGAACTCCGAGATATCTGCAATGATGTACTGGAGCTGCTGAGTAAATACCTAATAACAAATTCTGAAAATTACGAAAACAAGGTCTTTTACCTGAAGATGAAGGGAGACTACTTCAGATACCTTGCTGAAGTGGCCCCTAAAGATGataaatCTGCTATAAATGACTCTCAGCAAGCCTACCAAGAGGCATTCAATCTGAGCAAGGCGGAGATGCAGCCAACACACCCCATCCACCTGGGCCTTGCCCTGAACTTCTCTGTCTTCTATTACGAGATTCTTGGCTCTCCAAAGGAGGCTTGCAACCTCGCCAGAGAGGTACTTGAAAAAGCCACAGCAGAGGTCAGTTCACTTAATGAAGAGTCTTTTAAAGACAGCACCATCATCATACAGCTGCTAAGAGACAACCTCTCCTTATGGACATCCGATAACAGCGATGGAAAATGAAGGACAGAAGAGCTGAAACTTCCATGCCTTCAGATTAGATGGGGGATTATCCAATAGGATGAAAATCATTCTTTTAATAATCCATCACCTCACACTACTGTCTACTGCACCTCAGTGCTGCTATTTAAGCTATGTTATGGGTTATACCACTGTTAGTTAGTCAAACTCCTAATGCTCTTAACgcaaaaaaaggtaaaaaatcGAAAGATTCTCACATTAGGAAAATTAAGAGTTCACATTTAAACCAGTAGATTTTACTTTAACATTTGAGTAATGTGTTTTATGGTCATTTCTTAATGGGGAATCTTTAAATCTTTAGAATATTCTTTTGTACTTATGCAACGTGACATTCAAAATTCCTAACTGCTTGGTCACATACAAACATGAAAACCCACttgaaaacaacaataaaactgAGGAATGAGGCTCTGAGATTTTCTAAAATCCAAACAATTTTACAAAAGATTTTCCCAGTTGAAAAAgggcaaatgtattttttcattaattatgacacttaaaattgtaaaattggaAGATGAGTAATATGTCAGCCTTTTTAATTTtgcctaataaataaaaacttagtAATATCTAAGGCTTCAGGTTGAATGAGCGCAGAGAGGAGTGATGTGCAAGAGCTCCACAGTTTGTAAGGAAGCTAAAAGCTCTGTGACAAACAGTATCCAACATATGAAGATaccagtgtgatttatttatatacaaccAATCAGAATAATCAAGAACAGATGAAAATGTCAATTCAGCTAGTCATCGTCTAACAAAAAATAAGTACTTGATTGTTCAtctgtataaaataatacaatgttCAAATAGATTTCATTTGACCTATTGTATGTGCACAGCTGTTAATTCTGCATTATCTCTGCATTCTTTCAGCAGTGAACATGAATTTATGAACTTTTTACAGTTTtgcagtttagtgtttttattgctaTTGATAGCTGCATAAATTCAAGACTCGTATCTCACAATTTACATGAATTAGAAATGATGCAGAAGCAGATGTTTGACATTTTAACAGTGAAAAGTATGTAAGTTGAATAAGGTATGTTCCCATGCATGTTCTTAAAGACAAATATTGTTGGAATGTCATGGCAAGAACAGTTAAATACTTTTCACAGCAGGTTTGATAAATTGTGAGACTTTGAGCGAGTGCTCGGATAGATTTGGAACATGAATGTGTTTTGCTAGTCAACAATTACAGTCATAATCACCTTCTGGTCTGTTCATGCTTTACTTCTGTCATTCTAATGCCAccttaaaaaatgacaaaactgagctggaaacaaaaaagtaaagGGAAAATCTGCAGAGACAAAGaagtgaaacatttcaaaatggtactacaaaacaaaattattgcATCAAAAAACATCAATACCTTACTTTGTTTGCAACTTCAtcattgtgatattttctattttgaacAATGTTAAAGCCCTCAGTTTGACTCCATAGCTGGCTGATGGTTTATAGATTGGCCCAGTCAGGTTAGCTATGCTTCTGGGGACAGTACATACCTATTTCCTTTCTCTCAATGCGCAGCTTTTGCTTCGGGAGTATCCATTACTGAAGGTGTGGCTTTAGCAATGCGCCCTCTGTCGGGTGCCTAAGTTTATAGGTATAGGGCTACCATCTTGCTCATAACTTGAATCTATCAGAAAGCTGATATACTGGGGCCACAGATTATGTAACTTAAGGGAATATGAATCCTAACTAGTGGCCacaacatcatcacatcatcaaaacTTTGATTTACTATGATATTAAAAGGGAATGTAAAGGGCCAATGGCTTTGGTCTGTAATCTCTCAAGATAATTAAAATCATGATTAAATCTGAA

Function

NR:

description
PREDICTED: 14-3-3 protein zeta/delta-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0004497 monooxygenase activity molecular_function
GO:0019904 protein domain specific binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034308097.1 True 2865 mRNA 0.38 6 19449741 19457559
XM_034308098.1 False 2815 mRNA 0.38 6 19449796 19457559

Neighbor

gene id symbol gene type direction distance location
dhx32b LOC108269478,LOC108436743,LOC107592761 coding upstream 70967 19369052 ~ 19378774 (+)
adam12 LOC108270250,LOC108436745 coding upstream 97428 19227546 ~ 19352313 (+)
LOC113538933 c9h10orf90,LOC107594852 coding upstream 224900 19204852 ~ 19224841 (+)
insyn2ab LOC108269663 coding upstream 325506 19091361 ~ 19124235 (+)
eef1akmt2 mettl10 coding upstream 429125 19016194 ~ 19020616 (+)
gcfc2 LOC108270421 coding downstream 2624 19460183 ~ 19474686 (+)
LOC113538831 LOC108269613,LOC108441832 coding downstream 19654 19477213 ~ 19492363 (+)
LOC113538896 LOC108269628 coding downstream 163288 19620847 ~ 19630120 (+)
mthfd1b mthfd1,LOC108269612,LOC108232073 coding downstream 188724 19646283 ~ 19669547 (+)
plcb2 plcb2 coding downstream 321009 19778568 ~ 19809259 (+)
G168011 NA non-coding upstream 471265 18977016 ~ 18978476 (+)
G167913 LOC107572756,LOC107690120,LOC107579140 non-coding upstream 608131 18839609 ~ 18841610 (+)
G167909 NA non-coding upstream 612419 18837091 ~ 18837322 (+)
G167735 NA non-coding upstream 801179 18648355 ~ 18648562 (+)
G167730 NA non-coding upstream 806323 18642292 ~ 18643418 (+)
G168175 NA non-coding downstream 65595 19523154 ~ 19524855 (+)
G168207 NA non-coding downstream 138864 19596423 ~ 19596967 (+)
G168504 inafm2 non-coding downstream 315331 19772890 ~ 19774666 (+)
G168585 NA non-coding downstream 430368 19887927 ~ 19888154 (+)
G168630 NA non-coding downstream 530089 19987648 ~ 19987870 (+)
prlh2r LOC108269650,LOC108425589 other upstream 871433 18569379 ~ 18578308 (+)
ldah ldah other upstream 1075661 18330467 ~ 18374080 (+)
kidins220a LOC108269813,LOC108425633 other upstream 1526990 17867416 ~ 17922751 (+)
itgb1bp1 itgb1bp1,LOC107707691,LOC107655317 other upstream 1742909 17700467 ~ 17706832 (+)
sox11a sox11b,LOC108269454 other upstream 2018990 17385507 ~ 17430751 (+)
G168191 NA other downstream 217354 19674913 ~ 19687591 (+)
LOC113538915 c9h15orf52 other downstream 265221 19722780 ~ 19766581 (+)
zfyve19 zfyve19 other downstream 422176 19879735 ~ 19886509 (+)
LOC113538658 NA other downstream 455784 19913343 ~ 19922486 (+)
G168650 cep170b other downstream 584918 20042477 ~ 20042935 (+)

Expression


Co-expression Network