trnae-uuc_2


Basic Information

Item Value
gene id trnae-uuc_2
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 24428180 ~ 24428251 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnae-uuc_2
TCCCATATGGTCTAGCGGTCAGGATTCCTGGTTTTCACCCAGGCGGCCCGGGTTCGACTCCCGGTATGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-uuc_2 True 72 tRNA 0.60 1 24428180 24428251

Neighbor

gene id symbol gene type direction distance location
trnar-acg_2 NA coding upstream 1153 24426955 ~ 24427027 (+)
trnah-gug_12 NA coding upstream 1340 24426769 ~ 24426840 (+)
cdk1 cdk1,LOC107671106,LOC107717073 coding upstream 9256 24412971 ~ 24418924 (+)
pth2 pth2 coding upstream 64300 24361819 ~ 24363880 (+)
rin3 LOC108270235 coding upstream 69646 24347102 ~ 24358534 (+)
trnah-gug_13 NA coding downstream 1153 24429404 ~ 24429475 (+)
trnar-acg_3 NA coding downstream 1339 24429590 ~ 24429662 (+)
ptafr ptafr coding downstream 126332 24554583 ~ 24561278 (+)
pacrg pacrg,LOC107695182,LOC107697704,LOC107583491,LOC107590953 coding downstream 200844 24629095 ~ 24767416 (+)
qkia qkia,LOC108269894,LOC107697705,LOC107590898,LOC107721620 coding downstream 354752 24783003 ~ 24861032 (+)
G171021 ect2l non-coding upstream 110114 24317534 ~ 24318066 (+)
G171019 NA non-coding upstream 118214 24309630 ~ 24309966 (+)
G171017 NA non-coding upstream 119851 24307854 ~ 24308329 (+)
G170904 NA non-coding upstream 392009 24035784 ~ 24036171 (+)
LOC117598313 NA non-coding upstream 394118 24028325 ~ 24034062 (+)
G171135 smndc1 non-coding downstream 17352 24445603 ~ 24450067 (+)
G171121 NA non-coding downstream 57077 24485328 ~ 24491209 (+)
G171215 NA non-coding downstream 331361 24759612 ~ 24800058 (+)
G171352 nid2,wu:fb77a09,LOC107564977 non-coding downstream 644495 25072746 ~ 25076475 (+)
G171413 NA non-coding downstream 706349 25134600 ~ 25134885 (+)
LOC113533992 gphna,gphn,LOC108270253,LOC108443923,LOC107752769,LOC107657705,LOC107733155 other upstream 1405785 22861807 ~ 23022395 (+)
G169692 LOC107990201 other upstream 2608121 21819281 ~ 21820059 (+)
im:7136021 LOC108270035 other upstream 2661807 21760771 ~ 21766373 (+)
G169577 heatr5a,LOC108412624 other upstream 2753719 21669907 ~ 21674461 (+)
LOC113530103 LOC108269986 other upstream 3896958 20521595 ~ 20531222 (+)
kdm1a kdm1a other downstream 35215 24463466 ~ 24482854 (+)
cx28.6 LOC108269818,LOC108441857,LOC101482426,LOC102791942,LOC102199391,LOC100705227,LOC102313633,LOC107679991 other downstream 566242 24994493 ~ 25000619 (+)
G171329 NA other downstream 575732 25003983 ~ 25007766 (+)
LOC117598238 LOC108191637 other downstream 748123 25176374 ~ 25177897 (+)
samd4a samd4a other downstream 830560 25258811 ~ 25318277 (+)

Expression


Co-expression Network