trnah-gug_10


Basic Information

Item Value
gene id trnah-gug_10
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 23961984 ~ 23962055 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnah-gug_10
GCCGTGATCGTATAGTGGTCAGTACTCTGCGTTGTGGCCGCAGCAACCCCGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnah-gug_10 True 72 tRNA 0.61 1 23961984 23962055

Neighbor

gene id symbol gene type direction distance location
wdr25 wdr25 coding upstream 52349 23894848 ~ 23909635 (+)
slc25a47b slc25a47 coding upstream 78262 23879309 ~ 23883722 (+)
fancm fancm coding upstream 97851 23820846 ~ 23864133 (+)
LOC113534170 fam179b,LOC108270205,LOC108266164,LOC108270136 coding upstream 141670 23797542 ~ 23820314 (+)
c10h14orf28 c9h14orf28,clg15h14orf28,LOC106581668,LOC106610876 coding upstream 184668 23768992 ~ 23777316 (+)
trnah-gug_11 NA coding downstream 2793 23964848 ~ 23964919 (+)
trnay-aua NA coding downstream 2979 23965034 ~ 23965106 (+)
LOC113533835 dlk1 coding downstream 17335 23979390 ~ 23982635 (+)
ctsba ctsb,LOC108433939,LOC107733172,LOC107592770,LOC107752788 coding downstream 26703 23988758 ~ 23998042 (+)
pomca pomc coding downstream 271303 24233358 ~ 24235125 (+)
G170718 NA non-coding upstream 132798 23827063 ~ 23829186 (+)
G170716 NA non-coding upstream 179895 23779323 ~ 23782089 (+)
G170717 NA non-coding upstream 182757 23778269 ~ 23779227 (+)
G170610 NA non-coding upstream 586546 23375238 ~ 23375438 (+)
G170568 NA non-coding upstream 811900 23149542 ~ 23150084 (+)
G170893 LOC108269891,LOC108433938,LOC105908308,LOC105908357,LOC107592771,LOC107752785,LOC107674111,LOC107733184 non-coding downstream 48294 24010349 ~ 24011349 (+)
LOC117598313 NA non-coding downstream 66270 24028325 ~ 24034062 (+)
G170904 NA non-coding downstream 73729 24035784 ~ 24036171 (+)
G171017 NA non-coding downstream 345799 24307854 ~ 24308329 (+)
G171019 NA non-coding downstream 347575 24309630 ~ 24309966 (+)
LOC113533992 gphna,gphn,LOC108270253,LOC108443923,LOC107752769,LOC107657705,LOC107733155 other upstream 939589 22861807 ~ 23022395 (+)
G169692 LOC107990201 other upstream 2141925 21819281 ~ 21820059 (+)
im:7136021 LOC108270035 other upstream 2195611 21760771 ~ 21766373 (+)
G169577 heatr5a,LOC108412624 other upstream 2287523 21669907 ~ 21674461 (+)
LOC113530103 LOC108269986 other upstream 3430762 20521595 ~ 20531222 (+)
kdm1a kdm1a other downstream 501411 24463466 ~ 24482854 (+)
cx28.6 LOC108269818,LOC108441857,LOC101482426,LOC102791942,LOC102199391,LOC100705227,LOC102313633,LOC107679991 other downstream 1032438 24994493 ~ 25000619 (+)
G171329 NA other downstream 1041928 25003983 ~ 25007766 (+)
LOC117598238 LOC108191637 other downstream 1214319 25176374 ~ 25177897 (+)
samd4a samd4a other downstream 1296756 25258811 ~ 25318277 (+)

Expression


Co-expression Network