trnah-gug_12


Basic Information

Item Value
gene id trnah-gug_12
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047604.1
NCBI id CM018550.1
chromosome length 29376037
location 24426769 ~ 24426840 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnah-gug_12
GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGCCGCAGCAACCCCGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnah-gug_12 True 72 tRNA 0.60 1 24426769 24426840

Neighbor

gene id symbol gene type direction distance location
cdk1 cdk1,LOC107671106,LOC107717073 coding upstream 7845 24412971 ~ 24418924 (+)
pth2 pth2 coding upstream 62889 24361819 ~ 24363880 (+)
rin3 LOC108270235 coding upstream 68235 24347102 ~ 24358534 (+)
LOC113534014 snap23.1,LOC108270295,LOC107697784,LOC107752778,LOC108433924 coding upstream 80585 24333525 ~ 24346184 (+)
zgc:162964 NA coding upstream 119751 24295606 ~ 24307018 (+)
trnar-acg_2 NA coding downstream 115 24426955 ~ 24427027 (+)
trnae-uuc_2 NA coding downstream 1340 24428180 ~ 24428251 (+)
trnah-gug_13 NA coding downstream 2564 24429404 ~ 24429475 (+)
trnar-acg_3 NA coding downstream 2750 24429590 ~ 24429662 (+)
ptafr ptafr coding downstream 127743 24554583 ~ 24561278 (+)
G171021 ect2l non-coding upstream 108703 24317534 ~ 24318066 (+)
G171019 NA non-coding upstream 116803 24309630 ~ 24309966 (+)
G171017 NA non-coding upstream 118440 24307854 ~ 24308329 (+)
G170904 NA non-coding upstream 390598 24035784 ~ 24036171 (+)
LOC117598313 NA non-coding upstream 392707 24028325 ~ 24034062 (+)
G171135 smndc1 non-coding downstream 18763 24445603 ~ 24450067 (+)
G171121 NA non-coding downstream 58488 24485328 ~ 24491209 (+)
G171215 NA non-coding downstream 332772 24759612 ~ 24800058 (+)
G171352 nid2,wu:fb77a09,LOC107564977 non-coding downstream 645906 25072746 ~ 25076475 (+)
G171413 NA non-coding downstream 707760 25134600 ~ 25134885 (+)
LOC113533992 gphna,gphn,LOC108270253,LOC108443923,LOC107752769,LOC107657705,LOC107733155 other upstream 1404374 22861807 ~ 23022395 (+)
G169692 LOC107990201 other upstream 2606710 21819281 ~ 21820059 (+)
im:7136021 LOC108270035 other upstream 2660396 21760771 ~ 21766373 (+)
G169577 heatr5a,LOC108412624 other upstream 2752308 21669907 ~ 21674461 (+)
LOC113530103 LOC108269986 other upstream 3895547 20521595 ~ 20531222 (+)
kdm1a kdm1a other downstream 36626 24463466 ~ 24482854 (+)
cx28.6 LOC108269818,LOC108441857,LOC101482426,LOC102791942,LOC102199391,LOC100705227,LOC102313633,LOC107679991 other downstream 567653 24994493 ~ 25000619 (+)
G171329 NA other downstream 577143 25003983 ~ 25007766 (+)
LOC117598238 LOC108191637 other downstream 749534 25176374 ~ 25177897 (+)
samd4a samd4a other downstream 831971 25258811 ~ 25318277 (+)

Expression


Co-expression Network