Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC113546936 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22470179 ~ 22470678 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC113546936 | True | 410 | V_segment | 0.45 | 2 | 22470179 | 22470678 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117598775 | NA | coding | upstream | 801297 | 21668341 ~ 21668882 (+) |
| LOC117598774 | NA | coding | upstream | 804435 | 21664594 ~ 21665744 (+) |
| LOC117598848 | NA | coding | upstream | 806639 | 21663095 ~ 21663540 (+) |
| LOC117599000 | NA | coding | upstream | 809140 | 21660425 ~ 21661039 (+) |
| LOC117598992 | NA | coding | upstream | 811072 | 21658502 ~ 21659107 (+) |
| LOC113546929 | NA | coding | downstream | 66824 | 22537502 ~ 22548866 (+) |
| cckb | LOC108274239 | coding | downstream | 144181 | 22614859 ~ 22621980 (+) |
| rnf44 | rnf44 | coding | downstream | 263057 | 22733735 ~ 22754432 (+) |
| pdlim7 | pdlim7 | coding | downstream | 310688 | 22781366 ~ 22825233 (+) |
| LOC113546949 | LOC108277208 | coding | downstream | 671036 | 23141714 ~ 23143760 (+) |
| G215153 | NA | non-coding | upstream | 64655 | 22401950 ~ 22405524 (+) |
| G215149 | NA | non-coding | upstream | 126542 | 22340221 ~ 22343637 (+) |
| G215127 | NA | non-coding | upstream | 187186 | 22260891 ~ 22282993 (+) |
| LOC117598808 | NA | non-coding | upstream | 276596 | 22193074 ~ 22193583 (+) |
| LOC117598807 | NA | non-coding | upstream | 286195 | 22183539 ~ 22183984 (+) |
| LOC117598850 | NA | non-coding | downstream | 24530 | 22495208 ~ 22535776 (+) |
| LOC117595678 | NA | non-coding | downstream | 30205 | 22500883 ~ 22501370 (+) |
| G215294 | NA | non-coding | downstream | 254009 | 22724687 ~ 22726646 (+) |
| G215336 | NA | non-coding | downstream | 265093 | 22735771 ~ 22735986 (+) |
| G215343 | NA | non-coding | downstream | 307938 | 22778616 ~ 22779241 (+) |
| LOC117598940 | NA | other | upstream | 72609 | 22397112 ~ 22397570 (+) |
| LOC117598922 | LOC108275153 | other | upstream | 79357 | 22390359 ~ 22390822 (+) |
| LOC117598883 | NA | other | upstream | 82030 | 22387697 ~ 22388149 (+) |
| LOC117598944 | NA | other | upstream | 87854 | 22381888 ~ 22382325 (+) |
| LOC117598924 | NA | other | upstream | 90493 | 22379243 ~ 22379686 (+) |
| higd2a | higd2a | other | downstream | 295136 | 22765814 ~ 22769636 (+) |
| trnat-cgu_7 | NA | other | downstream | 309608 | 22780286 ~ 22780576 (+) |
| G215347 | NA | other | downstream | 364986 | 22835664 ~ 22835902 (+) |
| G215621 | LOC108277208 | other | downstream | 666568 | 23137246 ~ 23170553 (+) |
| LOC113546919 | LOC108278588 | other | downstream | 1260776 | 23731454 ~ 23741390 (+) |
