Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117595695 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 21952036 ~ 21952525 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC117595695 | True | 377 | V_segment | 0.46 | 2 | 21952036 | 21952525 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117598896 | NA | coding | downstream | 258402 | 21693183 ~ 21693634 (-) |
| LOC117598776 | NA | coding | downstream | 260460 | 21685697 ~ 21691576 (-) |
| LOC117598954 | NA | coding | downstream | 267391 | 21684024 ~ 21684645 (-) |
| LOC117598868 | NA | coding | downstream | 275229 | 21675638 ~ 21676807 (-) |
| LOC117598919 | NA | coding | downstream | 278706 | 21672822 ~ 21673330 (-) |
| topaz1 | topaz1 | coding | upstream | 600199 | 22552724 ~ 22582102 (-) |
| trak1b | LOC108275079,LOC108414239,LOC107706145 | coding | upstream | 677356 | 22629881 ~ 22644263 (-) |
| LOC113546927 | ctnnb1,LOC108256545,LOC108414240,LOC103034575,LOC107710337,LOC107706261,LOC107688361,LOC107654753 | coding | upstream | 709035 | 22661560 ~ 22676748 (-) |
| LOC113546904 | LOC108258503 | coding | upstream | 725639 | 22678164 ~ 22696823 (-) |
| cdhr2 | NA | coding | upstream | 754029 | 22706554 ~ 22729853 (-) |
| G215168 | NA | non-coding | downstream | 306142 | 21645119 ~ 21645894 (-) |
| G214980 | NA | non-coding | downstream | 317172 | 21634658 ~ 21634864 (-) |
| G214978 | rest,LOC106604639 | non-coding | downstream | 320169 | 21628129 ~ 21631867 (-) |
| G214977 | NA | non-coding | downstream | 330115 | 21620678 ~ 21621921 (-) |
| G214976 | NA | non-coding | downstream | 335204 | 21616602 ~ 21616832 (-) |
| G215217 | NA | non-coding | upstream | 69561 | 22022086 ~ 22078908 (-) |
| G215171 | NA | non-coding | upstream | 72958 | 22025483 ~ 22082843 (-) |
| G215221 | NA | non-coding | upstream | 127637 | 22080162 ~ 22136007 (-) |
| G215224 | NA | non-coding | upstream | 168931 | 22121456 ~ 22133365 (-) |
| G215172 | NA | non-coding | upstream | 173147 | 22125672 ~ 22140140 (-) |
| LOC113546938 | NA | other | downstream | 3686 | 21947731 ~ 21948350 (-) |
| LOC117598794 | NA | other | downstream | 13462 | 21794381 ~ 21938574 (-) |
| G215202 | NA | other | downstream | 14811 | 21792783 ~ 21937225 (-) |
| LOC117598958 | NA | other | downstream | 16850 | 21934755 ~ 21935186 (-) |
| LOC117598793 | NA | other | downstream | 19268 | 21932317 ~ 21932768 (-) |
| LOC117598870 | NA | other | upstream | 2775 | 21955300 ~ 21956128 (-) |
| LOC117595694 | NA | other | upstream | 4773 | 21957298 ~ 21957752 (-) |
| G215211 | NA | other | upstream | 4795 | 21957320 ~ 22217070 (-) |
| LOC117598909 | NA | other | upstream | 9913 | 21962438 ~ 21963007 (-) |
| LOC113546933 | NA | other | upstream | 13365 | 21965890 ~ 21966382 (-) |
