G202968



Basic Information


Item Value
gene id G202968
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 19977 ~ 20203 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU240262
CACAAAGCATCACTCTTCTTCTCGTGGAAGACAAAGGGGTTATTAAAGGTTACCTTTAAAAACgtatttctctaaaaaaaataaagttaagcCTCGTTAAAAACACAtctatatttgtaaaatatctaaaatggaaaatatcTCAGATGTAGTTTCTGCATGGCCTCATTTTCATAGAGTTTATCACAGAAAGCGAAAAGGACGGACTGTGACGCAGCTGTTTTTAC

Function


GO:

id name namespace
GO:0008509 anion transmembrane transporter activity molecular_function
GO:0015103 inorganic anion transmembrane transporter activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU240262 True 227 lncRNA 0.34 1 19977 20203

Neighbor


gene id symbol gene type direction distance location
LOC113525294 NA coding upstream 14195 2041 ~ 5782 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107689676,LOC107730742,LOC107548337 coding downstream 35358 55561 ~ 63406 (+)
LOC117598847 NA coding downstream 150642 170845 ~ 171952 (+)
ap2a1 ap2a1,LOC107554102,LOC107729492,LOC107730730,LOC107583017,LOC104937940,LOC103373570,LOC105939792 coding downstream 277468 297671 ~ 332191 (+)
si:ch211-195b15.8 LOC108280354,LOC107579758 coding downstream 316818 337021 ~ 340158 (+)
rras rras,LOC107658490,LOC107583016,LOC107729461,LOC107730736,LOC107554112,LOC107689668 coding downstream 327519 347722 ~ 356931 (+)
G202982 NA non-coding downstream 18234 38437 ~ 51075 (+)
G202983 NA non-coding downstream 20435 40638 ~ 42017 (+)
G203043 NA non-coding downstream 123873 144076 ~ 146717 (+)
G203049 NA non-coding downstream 138349 158552 ~ 158933 (+)
G203058 NA non-coding downstream 155230 175433 ~ 175991 (+)
G203046 NA other downstream 135124 155327 ~ 161112 (+)
G203047 NA other downstream 136417 156620 ~ 163136 (+)
G203077 NA other downstream 179057 199260 ~ 341276 (+)
G203081 NA other downstream 181747 201950 ~ 202805 (+)
prl LOC108280547,LOC108427375,LOC103023606 other downstream 246677 266880 ~ 359354 (+)

Expression



Co-expression Network