G203077


Basic Information

Item Value
gene id G203077
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 199260 ~ 341276 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU240433
tgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgttattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtagtgtgtgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgagtgtgagagtgtgtgagagtgtgtgagagtgtgtgagagtgtgtgagagtgtgtgagtgtgtgtgagtgtgtgtggagtgtgtgtgagtgtcagtcAGTAGTCcactgtgagtgagtgtgtgagtgtgtgtgagtgagtgagtgagtgtgtgtgtgtgtgtgtgtgagtgtgtgtgaagtgtgtgtgagtgtgtgtgtgtgagagagtgtgtgagtgtgtgtgtgaTTCTGATTCCACTGTTCTGCATGTAGgtcttttatttaaatccaGCGCTTTGTCATAAGCCGTGACCCTGTAGTGAAATGCTCCTGCACTGAATGTGTAAATACGAGTGAAGACACACAGCCTGTCtgtgaatttattatttattggattattgattattgattattgttatatttataaacGGATATTTTGAGGTTGATTTGCTGTTTTAGCGCTGCGGCTTGTACTGAGACACAGTGTTcattaaagaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240433 True 711 TUCP 0.44 5 199260 341276

Neighbor

gene id symbol gene type direction distance location
LOC117598847 NA coding upstream 27308 170845 ~ 171952 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107689676,LOC107730742,LOC107548337 coding upstream 135854 55561 ~ 63406 (+)
LOC113525294 NA coding upstream 193478 2041 ~ 5782 (+)
rras rras,LOC107658490,LOC107583016,LOC107729461,LOC107730736,LOC107554112,LOC107689668 coding downstream 6446 347722 ~ 356931 (+)
prrg2 NA coding downstream 22101 363377 ~ 369013 (+)
prr12b prr12,prr12b,LOC107729421,LOC107658420,LOC107730729,LOC107689691 coding downstream 29290 370566 ~ 404291 (+)
LOC113525002 LOC108280599 coding downstream 77475 418751 ~ 421225 (+)
scaf1 scaf1,LOC107658492,LOC107583012,LOC105925210 coding downstream 82570 423846 ~ 436894 (+)
G203058 NA non-coding upstream 23269 175433 ~ 175991 (+)
G203049 NA non-coding upstream 40327 158552 ~ 158933 (+)
G203043 NA non-coding upstream 52543 144076 ~ 146717 (+)
G202982 NA non-coding upstream 148185 38437 ~ 51075 (+)
G202983 NA non-coding upstream 157243 40638 ~ 42017 (+)
G203071 NA non-coding downstream 104198 445474 ~ 503897 (+)
G203134 NA non-coding downstream 168643 509919 ~ 512745 (+)
G203135 NA non-coding downstream 172313 513589 ~ 515888 (+)
G203141 NA non-coding downstream 190111 531387 ~ 531618 (+)
G203272 NA non-coding downstream 212445 553721 ~ 553946 (+)
G203047 NA other upstream 36124 156620 ~ 163136 (+)
G203046 NA other upstream 38148 155327 ~ 161112 (+)
LOC117598976 NA other downstream 181837 523113 ~ 529624 (+)
unc119.2 LOC108280499,LOC107689658,LOC107730769,LOC107658437,LOC108427309 other downstream 308168 649444 ~ 652250 (+)
thoc6 thoc6,LOC107580143,LOC108280484,LOC107730738,LOC107689651,LOC106600718 other downstream 325532 666808 ~ 723692 (+)
rnf25 rnf25 other downstream 366462 707738 ~ 717019 (+)
si:dkey-16l2.17 LOC108280473 other downstream 385453 726729 ~ 732890 (+)

Expression


Co-expression Network