G203155


Basic Information

Item Value
gene id G203155
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 347525 ~ 348129 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU240541
aaatctataaaatcgtgtataaagggagaaaaaatgaagaagaaaaaggtgTTACCCTTCTTTCCGCCGCTGCCGCCGCCGCCTTGAGTAAATTAGCCTGATTAGCTTCTGCCAAAGTTCGCGAGTGGAAAAGTCAAAGTGTTAAAAGTTAAAGTGAGGAAGCAAACAGGAGACAGTGAGAGCAGATTAACTTCCTTAAAAAGCCGCTGAATTTTATCCACAGATCACAAACAGAGGCGCACAAACCCGCAAATCATGTTTAAAACCGGAAAGAAATAAAGTTCCGGAGATTTCAGGAATGTGTtctggattttttcccccctgggTGATTTCTGCTCAGtggaatctctctctctctctctgtttctctctctctctctctctctctctgtttctctctctctctctctctctctctctgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240541 True 424 lncRNA 0.43 2 347525 348129

Neighbor

gene id symbol gene type direction distance location
prmt1 prmt1,LOC107729532,LOC107658485,LOC107689671,LOC107730737 coding downstream 54913 286041 ~ 292612 (-)
si:dkey-16p21.7 si:dkey-16p21.7,LOC108427376,LOC107658484,LOC107548343,LOC108274928,LOC108441159,LOC107598587,LOC107557374 coding downstream 96953 203871 ~ 250572 (-)
cpt1cb NA coding downstream 147133 144168 ~ 200392 (-)
LOC113525295 NA coding downstream 207687 116874 ~ 139838 (-)
tnnt1 tnnt1,LOC108427325,LOC108280528,LOC107583024 coding downstream 268561 65197 ~ 78964 (-)
si:ch211-195b15.7 LOC108280346 coding upstream 57797 405926 ~ 416575 (-)
rcn3 rcn3 coding upstream 159241 507370 ~ 516950 (-)
LOC113525013 NA coding upstream 263061 611190 ~ 614186 (-)
tspan4b LOC108280533,LOC107729542,LOC107658498,LOC108427360 coding upstream 274216 622345 ~ 630711 (-)
si:ch73-248e21.7 NA coding upstream 287555 635684 ~ 639207 (-)
G203158 NA non-coding downstream 6239 302577 ~ 341286 (-)
G203156 NA non-coding downstream 12865 333701 ~ 334660 (-)
G203189 NA non-coding downstream 25337 321410 ~ 322188 (-)
G203167 NA non-coding downstream 38597 303191 ~ 308928 (-)
LOC113525022 NA non-coding downstream 88045 252070 ~ 259480 (-)
G203190 NA non-coding upstream 456 348585 ~ 371473 (-)
G203157 NA non-coding upstream 8104 356233 ~ 359381 (-)
G203261 NA non-coding upstream 157187 505316 ~ 505912 (-)
G203268 NA non-coding upstream 185163 533292 ~ 533583 (-)
G203271 NA non-coding upstream 201334 549463 ~ 549711 (-)
G203154 NA other downstream 13881 331541 ~ 333644 (-)
G203170 NA other downstream 184941 162126 ~ 162584 (-)
pih1d1 pih1d1 other downstream 244412 80628 ~ 103113 (-)
aldh16a1 aldh16a1 other downstream 293250 26642 ~ 54275 (-)
G203254 NA other upstream 138093 486222 ~ 489731 (-)
LOC117598978 NA other upstream 391539 739668 ~ 750458 (-)
G203488 NA other upstream 393115 741244 ~ 750799 (-)
LOC117598979 NA other upstream 401934 750063 ~ 753822 (-)
G203544 NA other upstream 561988 910117 ~ 911228 (-)

Expression


Co-expression Network