G203156


Basic Information

Item Value
gene id G203156
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 333701 ~ 334660 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU240542
gagagagagagacagagagagagagacagagagagagagagagacagacagagagacagagacagagagagagacagaaacacagagacgaGTGGAGGCGCTGATGGAGTATATGGCATAGTTTTACTTTCACATTATTCAGTACAGAGTAAATTTCATCTAACACAGGTATCTGACAGGTTCAACACCGATACACTGGGGCTGCATTAGCTAGCGGATActgcaaagacacacacacacacacacacacacacacacacacacacacacacactcaccatgaCAATGATTCTACACTACAATCAAAGTCCCATCAATGCGTCACGGCAGCGGTGCAGTGAGGGGAAACATAGTGACTTCATTTAACTAATGACATAAATGTCTCATAAATCTCCAATaaattctctctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacccacacctcaCTGTGCTGTTCCTGTATGTGTGACTGACAGCTGGAGGCTGCTTTTATCCTGTAGGTCTGTCACATGTTTCACTCTGATCTctctccactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttaatctcGTTTCACTGAAAAAAGAGCTGCTTTCAGAGACGGCGCTGCTTTCTCAGAGGGAAGAAGGTGGAGTTGTGCGTCTCTGATGGCGCAGGGATTCCACAAACCCTTCAGGAAAGTGGAAAGGAACCGGAACTACTTTTTACTGAATTACTGCAGCGTGTGAAAGTTACAGATTAAAGATAAAAGTCCAGAAGAACAGACTGGGGGAGATTTTCTCTCAGGTGAGTCGGATCTGAACACCGACACTGTTCCTGTTGGAGCAGCTGCAGGTTCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240542 True 906 lncRNA 0.46 2 333701 334660

Neighbor

gene id symbol gene type direction distance location
prmt1 prmt1,LOC107729532,LOC107658485,LOC107689671,LOC107730737 coding downstream 41089 286041 ~ 292612 (-)
si:dkey-16p21.7 si:dkey-16p21.7,LOC108427376,LOC107658484,LOC107548343,LOC108274928,LOC108441159,LOC107598587,LOC107557374 coding downstream 83129 203871 ~ 250572 (-)
cpt1cb NA coding downstream 133309 144168 ~ 200392 (-)
LOC113525295 NA coding downstream 193863 116874 ~ 139838 (-)
tnnt1 tnnt1,LOC108427325,LOC108280528,LOC107583024 coding downstream 254737 65197 ~ 78964 (-)
si:ch211-195b15.7 LOC108280346 coding upstream 71266 405926 ~ 416575 (-)
rcn3 rcn3 coding upstream 172710 507370 ~ 516950 (-)
LOC113525013 NA coding upstream 276530 611190 ~ 614186 (-)
tspan4b LOC108280533,LOC107729542,LOC107658498,LOC108427360 coding upstream 287685 622345 ~ 630711 (-)
si:ch73-248e21.7 NA coding upstream 301024 635684 ~ 639207 (-)
G203189 NA non-coding downstream 11513 321410 ~ 322188 (-)
G203167 NA non-coding downstream 24773 303191 ~ 308928 (-)
LOC113525022 NA non-coding downstream 74221 252070 ~ 259480 (-)
G203174 NA non-coding downstream 146680 184940 ~ 187021 (-)
G203164 NA non-coding downstream 154330 179034 ~ 179371 (-)
G203155 NA non-coding upstream 12865 347525 ~ 348129 (-)
G203190 NA non-coding upstream 13925 348585 ~ 371473 (-)
G203157 NA non-coding upstream 21573 356233 ~ 359381 (-)
G203261 NA non-coding upstream 170656 505316 ~ 505912 (-)
G203268 NA non-coding upstream 198632 533292 ~ 533583 (-)
G203154 NA other downstream 57 331541 ~ 333644 (-)
G203170 NA other downstream 171117 162126 ~ 162584 (-)
pih1d1 pih1d1 other downstream 230588 80628 ~ 103113 (-)
aldh16a1 aldh16a1 other downstream 279426 26642 ~ 54275 (-)
G203254 NA other upstream 151562 486222 ~ 489731 (-)
LOC117598978 NA other upstream 405008 739668 ~ 750458 (-)
G203488 NA other upstream 406584 741244 ~ 750799 (-)
LOC117598979 NA other upstream 415403 750063 ~ 753822 (-)
G203544 NA other upstream 575457 910117 ~ 911228 (-)

Expression


Co-expression Network