G203425


Basic Information

Item Value
gene id G203425
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 665538 ~ 669489 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU240908
gagagaaagacagagagagagagagagagagagacaccggtgtatttatttatttatttataatcgagTATTCAGGTTTGTGTTGGCACGGAGAAACACATGACGTGTCTATGgttttacttctctctctctttcctcatcctcatcatcatcatcatcatcatcatcatcatcatcaccgcaatgaaagtaaaaaataaaccaaaaacatCCCTGTGGGTGAACGTGAGTGCAGAAAATCTGAGATGATTCCTCGCTCCAGTCCGTGTGGATcataatttacaaatatttttctgccgggactttttttttcttcttctttttttccctccaaagACACAATAGAAAGGTCAGGGAAAAGAACTAGACGAAGAACGCTTCAGTGATGTACAGCGCGATTAACTATTTTCTCCGCCGGCTGCTCGACCTGCTCCTCGATCTCctggaaacacagagagagagagagagagagggggagagagagagagagagagagagagaggagagagagagagagagagagagagagagagggagggggtgagagagagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240908 True 555 lncRNA 0.44 3 665538 669489

Neighbor

gene id symbol gene type direction distance location
si:ch73-248e21.5 NA coding downstream 20952 642509 ~ 644586 (-)
si:ch73-248e21.7 NA coding downstream 26331 635684 ~ 639207 (-)
tspan4b LOC108280533,LOC107729542,LOC107658498,LOC108427360 coding downstream 34827 622345 ~ 630711 (-)
LOC113525013 NA coding downstream 51352 611190 ~ 614186 (-)
rcn3 rcn3 coding downstream 148588 507370 ~ 516950 (-)
clec19a clec19a,LOC107658453,LOC107583104 coding upstream 250518 920007 ~ 931906 (-)
LOC113528078 cox6a2,LOC108280912,LOC107564019,LOC103367329,LOC107583062,LOC107658449 coding upstream 386881 1056370 ~ 1061679 (-)
LOC113528610 LOC108280679 coding upstream 442020 1111509 ~ 1119731 (-)
LOC117598757 LOC108280700,LOC108280715,LOC108280689,LOC108280710,LOC108280734 coding upstream 451677 1121166 ~ 1126092 (-)
LOC113528091 LOC108280723 coding upstream 474456 1143945 ~ 1148157 (-)
LOC117598763 NA non-coding downstream 98740 551404 ~ 566798 (-)
G203271 NA non-coding downstream 115827 549463 ~ 549711 (-)
G203268 NA non-coding downstream 131955 533292 ~ 533583 (-)
G203261 NA non-coding downstream 159626 505316 ~ 505912 (-)
G203190 NA non-coding downstream 294065 348585 ~ 371473 (-)
G203471 NA non-coding upstream 24010 693499 ~ 693886 (-)
G203458 NA non-coding upstream 50600 720089 ~ 763924 (-)
G203456 NA non-coding upstream 59322 728811 ~ 738745 (-)
G203486 NA non-coding upstream 68380 737869 ~ 745841 (-)
G203499 NA non-coding upstream 95962 765451 ~ 766214 (-)
G203254 NA other downstream 175807 486222 ~ 489731 (-)
G203154 NA other downstream 331894 331541 ~ 333644 (-)
G203170 NA other downstream 502954 162126 ~ 162584 (-)
pih1d1 pih1d1 other downstream 562425 80628 ~ 103113 (-)
aldh16a1 aldh16a1 other downstream 611263 26642 ~ 54275 (-)
LOC117598978 NA other upstream 70179 739668 ~ 750458 (-)
G203488 NA other upstream 71755 741244 ~ 750799 (-)
LOC117598979 NA other upstream 80574 750063 ~ 753822 (-)
G203544 NA other upstream 240628 910117 ~ 911228 (-)
si:dkey-66i24.7 LOC108280857,LOC108427346 other upstream 278241 947730 ~ 1066820 (-)

Expression


Co-expression Network