G203488


Basic Information

Item Value
gene id G203488
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 741244 ~ 750799 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU240991
CGTAAATCCGATCAGCGGATTGTTTCCGAGGTAAAAAAGACCTGTGAGGTGAGCAGTTCTGTCCCTCTGAGGTCTAATCAGCTTCTCAATAAAGCCACTCAGGTGGTGAGTGAGATGCTGCTCAGAAGGTTGTCAACAGCAGACTCCTCGAGATGCTCGTTAGAAGACGTGCAGAGTGCCGTCAGTACCGCAGATTCGCTCGTCAGGGTTTTATACGAATGTGACGAGTCTGTGAAAGAGAAGACTAAGAGCTCTGACGCTCTCGATGCCTTGTCCTGCTTCTTTGACGTCAGAGAAGCAGAATCTGCCAAAAAACCAAGGAACGTGTTGAGAAAAGTGCGAAGTCTCCTTCAGGCATTTTTCTCCAAGGCATCTAAAGCTCTGAGCTTTTCCACACACGAGGAGAGGGTGGAGGAGAAGGTGGACCTGGACCTGTGCACCAACAGGGTCATTACTGAAGTCATTGATTTGTTAAGGAGTGAGTTGACAGCTCCACCTGCGGTGAAGAACGATGACGCCTATTTCCACACCAAATCCACCAGGCGTGTGAGTGACATCATCTTCCGAATAGTGGAATCCTGTCCTCTCCTGCCTTCACAATTCCCAAAGGAACGCCACACGGAAGCGCAGCTCAGGAAAGTGGCGTCCGCGTTAAATCTGCAGGTCGTTTCTAC
>TU240992
GTCCAGCTCTTCTAAAGCGTCTCGGCGCAGACGGTCTGCGTTCTTGCAGCCGCGTAAATCCGATCAGCGGATTGTTTCCGAGGTAAAAAAGACCTGTGAGGTGAGCAGTTCTGTCCCTCTGAGGTCTAATCAGCTTCTCAATAAAGCCACTCAGGTGGTGAGTGAGATGCTGCTCAGAAGGTTGTCAACAGCAGACTCCTCGAGATGCTCGTTAGAAGACGTGCAGAGTGCCGTCAGTACCGCAGATTCGCTCGTCAGGGTTTTATACGAATGTGACGAGTCTGTGAAAGAGAAGACTAAGAGCTCTGACGCTCTCGATGCCTTGTCCTGCTTCTTTGACGTCAGAGAAGCAGAATCTGCCAAAAAACCAAGGAACGTGTTGAGAAAAGTGCGAAGTCTCCTTCAGGCATTTTTCTCCAAGGCATCTAAAGCTCTGAGCTTTTCCACACACGAGGAGAGGGTGGAGGAGAAGGTGGACCTGGACCTGTGCACCAACAGGGTCATTACTGAAGTCATTGATTTGTTAAGGAGTGAGTTGACAGCTCCACCTGCGGTGAAGAACGATGACGCCTATTTCCACACCAAATCCACCAGGCGTGTGAGTGACATCATCTTCCGAATAGTGGAATCCTGTCCTCTCCTGCCTTCACAATTCCCAAAGGAACGCCACACGGAAGCGCAGCTCAGGAAAGTGGCGTCCGCGTTAAATCTGCAGGTCGTTTCTACCGCTTCTGAGATTTCCCAAACTGTTAGCTCCACTGTGCAGCAGTTTATAGACGCAGACAGGAAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240991 False 674 TUCP 0.50 2 742693 749361
TU240992 True 792 TUCP 0.51 3 741244 750799

Neighbor

gene id symbol gene type direction distance location
si:ch73-248e21.5 NA coding downstream 96658 642509 ~ 644586 (-)
si:ch73-248e21.7 NA coding downstream 102037 635684 ~ 639207 (-)
tspan4b LOC108280533,LOC107729542,LOC107658498,LOC108427360 coding downstream 110533 622345 ~ 630711 (-)
LOC113525013 NA coding downstream 127058 611190 ~ 614186 (-)
rcn3 rcn3 coding downstream 224294 507370 ~ 516950 (-)
clec19a clec19a,LOC107658453,LOC107583104 coding upstream 169208 920007 ~ 931906 (-)
LOC113528078 cox6a2,LOC108280912,LOC107564019,LOC103367329,LOC107583062,LOC107658449 coding upstream 305571 1056370 ~ 1061679 (-)
LOC113528610 LOC108280679 coding upstream 360710 1111509 ~ 1119731 (-)
LOC117598757 LOC108280700,LOC108280715,LOC108280689,LOC108280710,LOC108280734 coding upstream 370367 1121166 ~ 1126092 (-)
LOC113528091 LOC108280723 coding upstream 393146 1143945 ~ 1148157 (-)
G203456 NA non-coding downstream 2499 728811 ~ 738745 (-)
G203471 NA non-coding downstream 47358 693499 ~ 693886 (-)
G203425 NA non-coding downstream 71755 665538 ~ 669489 (-)
LOC117598763 NA non-coding downstream 174446 551404 ~ 566798 (-)
G203271 NA non-coding downstream 191533 549463 ~ 549711 (-)
G203499 NA non-coding upstream 14652 765451 ~ 766214 (-)
G203502 NA non-coding upstream 26545 777344 ~ 805841 (-)
G203504 NA non-coding upstream 28115 778914 ~ 800162 (-)
G203510 hsd3b7 non-coding upstream 41158 791957 ~ 849865 (-)
G203513 NA non-coding upstream 66771 817570 ~ 884412 (-)
G203254 NA other downstream 251513 486222 ~ 489731 (-)
G203154 NA other downstream 407600 331541 ~ 333644 (-)
G203170 NA other downstream 578660 162126 ~ 162584 (-)
pih1d1 pih1d1 other downstream 638131 80628 ~ 103113 (-)
aldh16a1 aldh16a1 other downstream 686969 26642 ~ 54275 (-)
G203544 NA other upstream 159318 910117 ~ 911228 (-)
si:dkey-66i24.7 LOC108280857,LOC108427346 other upstream 196931 947730 ~ 1066820 (-)
LOC113528609 LOC108280700,LOC108280715,LOC108280710,LOC108280689,LOC108280734 other upstream 375885 1126684 ~ 1130550 (-)
G203695 LOC108427335,LOC107658445,LOC107729508,LOC103035240,LOC107674167,LOC107732842,LOC107563993 other upstream 514863 1265662 ~ 1345171 (-)
LOC113527889 LOC108278777 other upstream 1240374 1991173 ~ 2013251 (-)

Expression


Co-expression Network