G203544


Basic Information

Item Value
gene id G203544
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 910117 ~ 911228 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU241063
gaggagctgatttgattggacagttaATTTTAAAGGGGAGaagaggagctgatttgattggacagttaATTTTAAAGGGgatgagaggagctgatttgattggacagttaATTTTAAAGGGgatgagaggagctgatttgattggacacttatttttacagtaatgaCACTTTTCACCGTTTTACCTCCTGCACTGATggtcacaaaaaaacaaaccctgtGAAAATATATCATCATGATCTTATGCCTTATTATTTTCACAGAATTTTATATCACACAGATGGAGTCTATGGTGTGGAACTGAAAGCAACAGCCACGTTATTACTGATTAATTTCtaaatacctttaaaaaaaaacccaatcaGCTGATTAATAGAAGCAACGCCACGTCCCgtaacaggaggaggaggaggaggaggaggaggaggaggaatgaTCCCACTGATCTCAGCCTGAGCCGAGCCAATGATGAGGTTATTATGTTCTCCATGATGATAATATCAGTGTGATAAAGAACAAATGCTCAGCTGCGTCGCCGGAAAAACACTTTCTCAGCAGTCCAGCTTTCCAAATAAAGTTCACGAACTCCAGAGCAGAACACGAGCCGGTTCCAAAACCCACAGTCCATTCAGATCACCACAGTTCTTCTTATTGTTTGTCCTTCAAGTGAAACCCCGCCCATTAAATGGTCCACACTTCCTGCCTCCACCAATCGGCGTGCTGCGTGAGGATCACGTGACCTCGAGTGAGGCGGGAGAGACGCGGTCACACTCGGCGCGGGACCGCAGGCTGTGCCACTGTTCCACGGGCGTGCGCTGGGAACGCAGCAGACGCCGCCAGTGCGTGGTCTCGGCCGGCCCCGTGGAGAACTGACCAATCACGACGCGGCCCACAAAGTCGTTGCTGCTCTTCATGTTGTGGCCGTAAACTAGAGACAAGAGGAAGAGCAGAAAATATCTTCATATCAAGAGCCACTTAAACCGACAGGATTTTAGAagtgaatgtttatttatatattttatatttatgacattatatttattacaggcTCTTAGATCCTCCTTAACAAGGAAATATGctacaaaatacaaacacaatcagTTCATTTCTTC

Function

NR:

description
PREDICTED: uncharacterized protein KIAA1211-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241063 True 1112 TUCP 0.44 1 910117 911228

Neighbor

gene id symbol gene type direction distance location
si:ch73-248e21.5 NA coding downstream 265531 642509 ~ 644586 (-)
si:ch73-248e21.7 NA coding downstream 270910 635684 ~ 639207 (-)
tspan4b LOC108280533,LOC107729542,LOC107658498,LOC108427360 coding downstream 279406 622345 ~ 630711 (-)
LOC113525013 NA coding downstream 295931 611190 ~ 614186 (-)
rcn3 rcn3 coding downstream 393167 507370 ~ 516950 (-)
clec19a clec19a,LOC107658453,LOC107583104 coding upstream 8779 920007 ~ 931906 (-)
LOC113528078 cox6a2,LOC108280912,LOC107564019,LOC103367329,LOC107583062,LOC107658449 coding upstream 145142 1056370 ~ 1061679 (-)
LOC113528610 LOC108280679 coding upstream 200281 1111509 ~ 1119731 (-)
LOC117598757 LOC108280700,LOC108280715,LOC108280689,LOC108280710,LOC108280734 coding upstream 209938 1121166 ~ 1126092 (-)
LOC113528091 LOC108280723 coding upstream 232717 1143945 ~ 1148157 (-)
G203543 NA non-coding downstream 6785 903037 ~ 903332 (-)
G203513 NA non-coding downstream 25705 817570 ~ 884412 (-)
G203510 hsd3b7 non-coding downstream 60252 791957 ~ 849865 (-)
G203502 NA non-coding downstream 104276 777344 ~ 805841 (-)
G203504 NA non-coding downstream 109955 778914 ~ 800162 (-)
G203545 NA non-coding upstream 728 911956 ~ 913561 (-)
LOC117598764 NA non-coding upstream 28280 939508 ~ 940343 (-)
G203564 smg1 non-coding upstream 43456 954684 ~ 956624 (-)
G203577 smg1 non-coding upstream 69144 980372 ~ 981015 (-)
G203559 LOC108280785 non-coding upstream 130263 1041491 ~ 1043647 (-)
LOC117598979 NA other downstream 156295 750063 ~ 753822 (-)
G203488 NA other downstream 159318 741244 ~ 750799 (-)
LOC117598978 NA other downstream 159659 739668 ~ 750458 (-)
G203254 NA other downstream 420386 486222 ~ 489731 (-)
G203154 NA other downstream 576473 331541 ~ 333644 (-)
si:dkey-66i24.7 LOC108280857,LOC108427346 other upstream 36502 947730 ~ 1066820 (-)
LOC113528609 LOC108280700,LOC108280715,LOC108280710,LOC108280689,LOC108280734 other upstream 215456 1126684 ~ 1130550 (-)
G203695 LOC108427335,LOC107658445,LOC107729508,LOC103035240,LOC107674167,LOC107732842,LOC107563993 other upstream 354434 1265662 ~ 1345171 (-)
LOC113527889 LOC108278777 other upstream 1079945 1991173 ~ 2013251 (-)
LOC113528455 LOC108278793,LOC108434931,LOC107551147,LOC107729474 other upstream 1154660 2065888 ~ 2077477 (-)

Expression


Co-expression Network