G203609


Basic Information

Item Value
gene id G203609
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 1111087 ~ 1111312 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU241153
GCTTTCTCACTTTCTCCGTACCCCAGCACACATTTTATATGGACTCCTATAGAAGTGGCTACttttagaaatatttctttgttaataTTCTGATGTTGTAATGTAACTAAACATAACTCTGTATGTTTGAGATGTTCACCGGTGCATGATGTCTCCAAAGTTAAAGCGaagacaaacaacctcctcatcatAAGAGTTACACTGagttatctttattttattactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241153 True 226 lncRNA 0.35 1 1111087 1111312

Neighbor

gene id symbol gene type direction distance location
LOC113528078 cox6a2,LOC108280912,LOC107564019,LOC103367329,LOC107583062,LOC107658449 coding downstream 49408 1056370 ~ 1061679 (-)
clec19a clec19a,LOC107658453,LOC107583104 coding downstream 179181 920007 ~ 931906 (-)
si:ch73-248e21.5 NA coding downstream 466501 642509 ~ 644586 (-)
si:ch73-248e21.7 NA coding downstream 471880 635684 ~ 639207 (-)
tspan4b LOC108280533,LOC107729542,LOC107658498,LOC108427360 coding downstream 480376 622345 ~ 630711 (-)
LOC113528610 LOC108280679 coding upstream 197 1111509 ~ 1119731 (-)
LOC117598757 LOC108280700,LOC108280715,LOC108280689,LOC108280710,LOC108280734 coding upstream 9854 1121166 ~ 1126092 (-)
LOC113528091 LOC108280723 coding upstream 32633 1143945 ~ 1148157 (-)
LOC117598761 NA coding upstream 37283 1148595 ~ 1150039 (-)
LOC113528092 LOC108280700,LOC108280715,LOC108280689,LOC108280710,LOC108280734,LOC108280723 coding upstream 65086 1176398 ~ 1178798 (-)
G203559 LOC108280785 non-coding downstream 67440 1041491 ~ 1043647 (-)
G203577 smg1 non-coding downstream 130072 980372 ~ 981015 (-)
G203564 smg1 non-coding downstream 154463 954684 ~ 956624 (-)
LOC117598764 NA non-coding downstream 170744 939508 ~ 940343 (-)
G203545 NA non-coding downstream 197526 911956 ~ 913561 (-)
G203630 NA non-coding upstream 126852 1238164 ~ 1241189 (-)
G203739 NA non-coding upstream 343875 1455187 ~ 1457398 (-)
G203733 NA non-coding upstream 387708 1499020 ~ 1500815 (-)
G203756 NA non-coding upstream 395889 1507201 ~ 1527141 (-)
LOC117599001 NA non-coding upstream 414351 1525663 ~ 1528233 (-)
si:dkey-66i24.7 LOC108280857,LOC108427346 other downstream 44267 947730 ~ 1066820 (-)
G203544 NA other downstream 199859 910117 ~ 911228 (-)
LOC117598979 NA other downstream 357265 750063 ~ 753822 (-)
G203488 NA other downstream 360288 741244 ~ 750799 (-)
LOC117598978 NA other downstream 360629 739668 ~ 750458 (-)
LOC113528609 LOC108280700,LOC108280715,LOC108280710,LOC108280689,LOC108280734 other upstream 15372 1126684 ~ 1130550 (-)
G203695 LOC108427335,LOC107658445,LOC107729508,LOC103035240,LOC107674167,LOC107732842,LOC107563993 other upstream 154350 1265662 ~ 1345171 (-)
LOC113527889 LOC108278777 other upstream 879861 1991173 ~ 2013251 (-)
LOC113528455 LOC108278793,LOC108434931,LOC107551147,LOC107729474 other upstream 954576 2065888 ~ 2077477 (-)
ifi35 ifi35 other upstream 1001133 2112445 ~ 2195540 (-)

Expression


Co-expression Network