G203630


Basic Information

Item Value
gene id G203630
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 1238164 ~ 1241189 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU241185
CGCATTACACCAGATCACGAGTAGTCAACTAACGTAACGTATGTGACTGAACGACTGTTACGTTTTAACGTTTAATTATTAGTGATTAGTTCACGGCTATAAATACGACAACCtgaagtttttatattttgttttgtagtggtCGATTCGTTGTCCAATCAAATTTTAAACACTCTGACTGCATTGTgaacttttctttaaacaagCCGTGTCAGCTCGTgaatcagaccagagagagttaaaaaatatatatattcaaaaatcgatgaaaaaaaaattctatctGAGCTTTCACCTCTAGCTATGTAGCTAGACTGTGctgccttcagctaaataatttgcataaacgcagctgattggctgaaacagaggatctgctacagaagccgaGCTGCTTCACTGCTTCATCGCGAAACTACggcaatatttttttacattaatcaGTTCTGTGaccgtattttttttttccaagtactCATTTGGTCCACTACTAATATTTTGCCAGTAGATGACTCCTTGTCTGTATTATAATTTGATAAACTAGCTTAGCtaatgtgattaaaaacagcaaaaataaatcagcttACATGGCGAAAACATAAACGGCTAATTTTTCTGCACTGCTGCTATCAGCTATATAGTTAACAAGTTAGCATAAAAACGAGTCATTAGAAAGCCTACATGTTGACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241185 True 692 lncRNA 0.36 2 1238164 1241189

Neighbor

gene id symbol gene type direction distance location
LOC113528093 LOC108280723 coding downstream 21598 1208175 ~ 1216566 (-)
LOC113528094 LOC108280689,LOC108280734 coding downstream 32960 1202428 ~ 1205204 (-)
LOC113528095 LOC108280700,LOC108280689,LOC108280715,LOC108280710,LOC108280723,LOC108280734 coding downstream 43980 1190456 ~ 1194184 (-)
LOC113528092 LOC108280700,LOC108280715,LOC108280689,LOC108280710,LOC108280734,LOC108280723 coding downstream 59366 1176398 ~ 1178798 (-)
LOC117598761 NA coding downstream 88125 1148595 ~ 1150039 (-)
LOC113528234 NA coding upstream 27193 1268382 ~ 1279552 (-)
LOC113525779 NA coding upstream 41211 1282400 ~ 1294239 (-)
LOC113528189 NA coding upstream 61212 1302401 ~ 1306363 (-)
LOC113527946 LOC108280870,LOC103034911 coding upstream 68699 1309888 ~ 1316175 (-)
LOC113528660 NA coding upstream 258072 1499261 ~ 1499350 (-)
G203609 NA non-coding downstream 126852 1111087 ~ 1111312 (-)
G203559 LOC108280785 non-coding downstream 194517 1041491 ~ 1043647 (-)
G203577 smg1 non-coding downstream 257149 980372 ~ 981015 (-)
G203564 smg1 non-coding downstream 281540 954684 ~ 956624 (-)
LOC117598764 NA non-coding downstream 297821 939508 ~ 940343 (-)
G203739 NA non-coding upstream 213998 1455187 ~ 1457398 (-)
G203733 NA non-coding upstream 257831 1499020 ~ 1500815 (-)
G203756 NA non-coding upstream 266012 1507201 ~ 1527141 (-)
LOC117599001 NA non-coding upstream 284474 1525663 ~ 1528233 (-)
LOC117598750 NA non-coding upstream 476824 1718013 ~ 1718791 (-)
LOC113528609 LOC108280700,LOC108280715,LOC108280710,LOC108280689,LOC108280734 other downstream 107614 1126684 ~ 1130550 (-)
si:dkey-66i24.7 LOC108280857,LOC108427346 other downstream 171344 947730 ~ 1066820 (-)
G203544 NA other downstream 326936 910117 ~ 911228 (-)
LOC117598979 NA other downstream 484342 750063 ~ 753822 (-)
G203488 NA other downstream 487365 741244 ~ 750799 (-)
G203695 LOC108427335,LOC107658445,LOC107729508,LOC103035240,LOC107674167,LOC107732842,LOC107563993 other upstream 24473 1265662 ~ 1345171 (-)
LOC113527889 LOC108278777 other upstream 749984 1991173 ~ 2013251 (-)
LOC113528455 LOC108278793,LOC108434931,LOC107551147,LOC107729474 other upstream 824699 2065888 ~ 2077477 (-)
ifi35 ifi35 other upstream 871256 2112445 ~ 2195540 (-)
LOC113528223 LOC108276032,LOC108261353,LOC108261342 other upstream 1090487 2331676 ~ 2344912 (-)

Expression


Co-expression Network