G203739


Basic Information

Item Value
gene id G203739
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 1455187 ~ 1457398 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU241318
CGTTTATCCACACCtgaggaaacacacagagatatacacacattcacatttagtGACATTATCACTGACCATAATACAGTactcaaaagttttttttgtttatatgtaaacacacacacacacctttgacTTTGTCTCCCTTGTTGAGGCTGATCTCACGCTCGccctgtgctgtgtgtgagcgCGTAGCCACAAACACTCGCCCCGGCACGGCACTGTACAGACGCCTTCGCTGAGCCGGAGCCGCACCCTGTGAACCGATGGAACCGACCCCCTGTCTACGGCTCTGTCTGCTGCGGTCGTCTCTGTCTCCTGTTCGGCCTCGGGACGGTGAACGCGTTCGGGCTCCCCGGGGACTGCTGGAGCTGCG

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0006813 potassium ion transport biological_process

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU241318 True 370 lncRNA 0.54 2 1455187 1457398

Neighbor

gene id symbol gene type direction distance location
LOC113527946 LOC108280870,LOC103034911 coding downstream 139012 1309888 ~ 1316175 (-)
LOC113528189 NA coding downstream 148824 1302401 ~ 1306363 (-)
LOC113525779 NA coding downstream 160948 1282400 ~ 1294239 (-)
LOC113528234 NA coding downstream 175635 1268382 ~ 1279552 (-)
LOC113528093 LOC108280723 coding downstream 238621 1208175 ~ 1216566 (-)
LOC113528660 NA coding upstream 41863 1499261 ~ 1499350 (-)
LOC113528659 NA coding upstream 42117 1499515 ~ 1499605 (-)
mybpc2a mybpc2,LOC107729557,LOC107680879,LOC107732898 coding upstream 309908 1767306 ~ 1812044 (-)
akt1s1 akt1s1,LOC107564011,LOC107680841 coding upstream 384591 1841989 ~ 1859709 (-)
aoc2 LOC108276610 coding upstream 768213 2225611 ~ 2233295 (-)
G203630 NA non-coding downstream 213998 1238164 ~ 1241189 (-)
G203609 NA non-coding downstream 343875 1111087 ~ 1111312 (-)
G203559 LOC108280785 non-coding downstream 411540 1041491 ~ 1043647 (-)
G203577 smg1 non-coding downstream 474172 980372 ~ 981015 (-)
G203564 smg1 non-coding downstream 498563 954684 ~ 956624 (-)
G203733 NA non-coding upstream 41622 1499020 ~ 1500815 (-)
G203756 NA non-coding upstream 49803 1507201 ~ 1527141 (-)
LOC117599001 NA non-coding upstream 68265 1525663 ~ 1528233 (-)
LOC117598750 NA non-coding upstream 260615 1718013 ~ 1718791 (-)
G204080 NA non-coding upstream 273603 1731001 ~ 1731200 (-)
G203695 LOC108427335,LOC107658445,LOC107729508,LOC103035240,LOC107674167,LOC107732842,LOC107563993 other downstream 110016 1265662 ~ 1345171 (-)
LOC113528609 LOC108280700,LOC108280715,LOC108280710,LOC108280689,LOC108280734 other downstream 324637 1126684 ~ 1130550 (-)
si:dkey-66i24.7 LOC108280857,LOC108427346 other downstream 388367 947730 ~ 1066820 (-)
G203544 NA other downstream 543959 910117 ~ 911228 (-)
LOC117598979 NA other downstream 701365 750063 ~ 753822 (-)
LOC113527889 LOC108278777 other upstream 533775 1991173 ~ 2013251 (-)
LOC113528455 LOC108278793,LOC108434931,LOC107551147,LOC107729474 other upstream 608490 2065888 ~ 2077477 (-)
ifi35 ifi35 other upstream 655047 2112445 ~ 2195540 (-)
LOC113528223 LOC108276032,LOC108261353,LOC108261342 other upstream 874278 2331676 ~ 2344912 (-)
LOC113528062 LOC108276032,LOC108276106 other upstream 975751 2433149 ~ 2538111 (-)

Expression


Co-expression Network