G204080


Basic Information

Item Value
gene id G204080
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 1731001 ~ 1731200 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU241710
ctgtacatcataaaaaaacAAGCCTGTGATTAACGTTCttgtctgctgctcctcctctgCGCagggggcagcgtgattcctgccccagtgaaCCCATTTTTCACCACTAGgtacaataataactctatggagctaCATGATCACGCTGCACCACGACTGCGCAACACCTAGAAATGCGAGCAAATCATCTTATATCTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241710 True 200 lncRNA 0.47 1 1731001 1731200

Neighbor

gene id symbol gene type direction distance location
LOC113528659 NA coding downstream 231396 1499515 ~ 1499605 (-)
LOC113528660 NA coding downstream 231651 1499261 ~ 1499350 (-)
LOC113527946 LOC108280870,LOC103034911 coding downstream 414826 1309888 ~ 1316175 (-)
LOC113528189 NA coding downstream 424638 1302401 ~ 1306363 (-)
LOC113525779 NA coding downstream 436762 1282400 ~ 1294239 (-)
mybpc2a mybpc2,LOC107729557,LOC107680879,LOC107732898 coding upstream 36106 1767306 ~ 1812044 (-)
akt1s1 akt1s1,LOC107564011,LOC107680841 coding upstream 110789 1841989 ~ 1859709 (-)
aoc2 LOC108276610 coding upstream 494411 2225611 ~ 2233295 (-)
LOC113528224 LOC108276032 coding upstream 538471 2269671 ~ 2283303 (-)
LOC117598982 LOC108276075,LOC108276032 coding upstream 558217 2289417 ~ 2304449 (-)
LOC117598750 NA non-coding downstream 12210 1718013 ~ 1718791 (-)
LOC117599001 NA non-coding downstream 202768 1525663 ~ 1528233 (-)
G203756 NA non-coding downstream 203860 1507201 ~ 1527141 (-)
G203733 NA non-coding downstream 230186 1499020 ~ 1500815 (-)
G203739 NA non-coding downstream 273603 1455187 ~ 1457398 (-)
G204084 NA non-coding upstream 4318 1735518 ~ 1735720 (-)
G204087 NA non-coding upstream 18982 1750182 ~ 1750391 (-)
G204090 NA non-coding upstream 35451 1766651 ~ 1766869 (-)
G204062 LOC108274956 non-coding upstream 107388 1838588 ~ 1893122 (-)
G204060 NA non-coding upstream 125223 1856423 ~ 1871551 (-)
G203695 LOC108427335,LOC107658445,LOC107729508,LOC103035240,LOC107674167,LOC107732842,LOC107563993 other downstream 385830 1265662 ~ 1345171 (-)
LOC113528609 LOC108280700,LOC108280715,LOC108280710,LOC108280689,LOC108280734 other downstream 600451 1126684 ~ 1130550 (-)
si:dkey-66i24.7 LOC108280857,LOC108427346 other downstream 664181 947730 ~ 1066820 (-)
G203544 NA other downstream 819773 910117 ~ 911228 (-)
LOC117598979 NA other downstream 977179 750063 ~ 753822 (-)
LOC113527889 LOC108278777 other upstream 259973 1991173 ~ 2013251 (-)
LOC113528455 LOC108278793,LOC108434931,LOC107551147,LOC107729474 other upstream 334688 2065888 ~ 2077477 (-)
ifi35 ifi35 other upstream 381245 2112445 ~ 2195540 (-)
LOC113528223 LOC108276032,LOC108261353,LOC108261342 other upstream 600476 2331676 ~ 2344912 (-)
LOC113528062 LOC108276032,LOC108276106 other upstream 701949 2433149 ~ 2538111 (-)

Expression


Co-expression Network